FFCP PHASE1:Hg19::chr10:3048947..3048956,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:3048947..3048956,-|id=chr10:3048947..3048956,-|ontology_enrichment_celltype=CL:0000055!1.68e-19!180;CL:0000057!5.53e-17!75;CL:0000048!2.94e-13!430;CL:0000723!4.18e-13!436;CL:0002371!7.27e-13!591;CL:0000034!2.76e-12!444;CL:0000144!1.85e-11!625;CL:0002494!3.38e-11!16;CL:0002620!7.55e-11!23;CL:0000680!4.42e-09!57;CL:0000056!4.42e-09!57;CL:0000355!4.42e-09!57;CL:0000548!2.11e-08!679;CL:0000004!2.11e-08!679;CL:0000255!2.11e-08!679;CL:0000012!3.47e-08!682;CL:0000183!4.32e-08!59;CL:0002320!4.84e-08!365;CL:0000187!1.27e-07!54|ontology_enrichment_celltype_v019=CL:0002541;1.94e-09;3!CL:0002580;1.94e-09;3!CL:0002591;4.50e-08;1!CL:0002616;4.50e-08;1!CL:0002174;1.07e-07;1!CL:0000501;1.07e-07;1!CL:0000062;5.15e-07;9!CL:0002620;5.89e-07;23|ontology_enrichment_celltype_v019_2=CL:0002580,1.71e-09,3;CL:0002541,2.41e-09,3;CL:0002616,3.80e-08,1;CL:0002591,5.33e-08,1;CL:0002174,1.44e-07,1;CL:0000501,1.44e-07,1;CL:0002620,5.00e-07,23;CL:0000057,6.56e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!2.43e-07!5;DOID:450!2.43e-07!5;DOID:66!2.43e-07!5;DOID:423!2.43e-07!5;DOID:0080000!2.43e-07!5;DOID:11722!2.43e-07!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!3.67e-10!83;UBERON:0002329!3.67e-10!83;UBERON:0003077!3.67e-10!83;UBERON:0003059!3.67e-10!83;UBERON:0007282!3.67e-10!83;UBERON:0009618!3.67e-10!83;UBERON:0007285!3.67e-10!83;UBERON:0000948!9.72e-09!24;UBERON:0005498!9.72e-09!24;UBERON:0004140!9.72e-09!24;UBERON:0009881!9.72e-09!24;UBERON:0004141!9.72e-09!24;UBERON:0003084!9.72e-09!24;UBERON:0007005!9.72e-09!24;UBERON:0004139!9.72e-09!24;UBERON:0004291!9.72e-09!24;UBERON:0002384!2.07e-08!375;UBERON:0002385!3.23e-08!63;UBERON:0001015!3.23e-08!63;UBERON:0000383!3.23e-08!63;UBERON:0004290!4.16e-08!70;UBERON:0001134!5.37e-08!61;UBERON:0002036!5.37e-08!61;UBERON:0003082!5.37e-08!61;UBERON:0004872!8.44e-08!84;UBERON:0007100!2.61e-07!27;UBERON:0004535!3.81e-07!110;UBERON:0002097!7.47e-07!40|ontology_enrichment_uberon_v019=UBERON:0003124;1.94e-09;3!UBERON:0000920;1.94e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.41e-09,3|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0.893922188854576,2.61701557230111,0,0,0,0,0,0.218441372130172,0,0.37129905888014,0.994192127183747,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0,0,0.144846518960824,3.9764297352555,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0.33472061276467,0,0,0,0,1.62028389576352,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.794455084879313,4.87622255272983,0,0.560677600142307,0,0.49333509683432,0.622422070799533,0.538842688278752,0.490385709340376,1.36221684880438,0,0,0,0,0.298897361103602,0,0,0.280901613404497,0,0.245668634623536,0.103325781175765,0,0,1.82032272387605,0.718618141816238,0,0,0,0,0.612975591598039,0.150238058906597,0.226864366320042,2.51145489964407,0.427114777637135,0.635795703478686,1.80054657650641,0.515262646192195,2.31876486041066,0.18611685633159,0.506328996723799,0.68205903612839,2.27190396819703,0.184099797284599,0.323292113637624,1.77504796258307,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0,0.517086863031111,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35632511849868,0.415941723061614,0.535286966391485,0.157702415033935,0.468565659970853,0,2.27407504055985,1.03473071292505,1.32845119707087,0,0,0.783204629850962,0.686286847621712,0,0,0,0.303127571446259,0,0,1.98486246255021,0.460385919864187,1.12264037773229,0.512556597022804,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.462145851343933,0.15350367472613,0.275673144969061,0.429680979473094,0.145016693914229,0.0852266274161009,0.267096106940212,0.661139661443912,0,0.127612712494584,0,0,5.98143458978216,0,0.308033580176089,0.532306030317022,0.869932992075073,0,0.286249773483982,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0.274537029736055,0,0.202182481573316,0,0.421258456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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:3048947..3048956,- | |||
|id=chr10:3048947..3048956,- | |||
|ontology_enrichment_celltype=CL:0000055!1.68e-19!180;CL:0000057!5.53e-17!75;CL:0000048!2.94e-13!430;CL:0000723!4.18e-13!436;CL:0002371!7.27e-13!591;CL:0000034!2.76e-12!444;CL:0000144!1.85e-11!625;CL:0002494!3.38e-11!16;CL:0002620!7.55e-11!23;CL:0000680!4.42e-09!57;CL:0000056!4.42e-09!57;CL:0000355!4.42e-09!57;CL:0000548!2.11e-08!679;CL:0000004!2.11e-08!679;CL:0000255!2.11e-08!679;CL:0000012!3.47e-08!682;CL:0000183!4.32e-08!59;CL:0002320!4.84e-08!365;CL:0000187!1.27e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.94e-09;3!CL:0002580;1.94e-09;3!CL:0002591;4.50e-08;1!CL:0002616;4.50e-08;1!CL:0002174;1.07e-07;1!CL:0000501;1.07e-07;1!CL:0000062;5.15e-07;9!CL:0002620;5.89e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.71e-09,3;CL:0002541,2.41e-09,3;CL:0002616,3.80e-08,1;CL:0002591,5.33e-08,1;CL:0002174,1.44e-07,1;CL:0000501,1.44e-07,1;CL:0002620,5.00e-07,23;CL:0000057,6.56e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.43e-07!5;DOID:450!2.43e-07!5;DOID:66!2.43e-07!5;DOID:423!2.43e-07!5;DOID:0080000!2.43e-07!5;DOID:11722!2.43e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.67e-10!83;UBERON:0002329!3.67e-10!83;UBERON:0003077!3.67e-10!83;UBERON:0003059!3.67e-10!83;UBERON:0007282!3.67e-10!83;UBERON:0009618!3.67e-10!83;UBERON:0007285!3.67e-10!83;UBERON:0000948!9.72e-09!24;UBERON:0005498!9.72e-09!24;UBERON:0004140!9.72e-09!24;UBERON:0009881!9.72e-09!24;UBERON:0004141!9.72e-09!24;UBERON:0003084!9.72e-09!24;UBERON:0007005!9.72e-09!24;UBERON:0004139!9.72e-09!24;UBERON:0004291!9.72e-09!24;UBERON:0002384!2.07e-08!375;UBERON:0002385!3.23e-08!63;UBERON:0001015!3.23e-08!63;UBERON:0000383!3.23e-08!63;UBERON:0004290!4.16e-08!70;UBERON:0001134!5.37e-08!61;UBERON:0002036!5.37e-08!61;UBERON:0003082!5.37e-08!61;UBERON:0004872!8.44e-08!84;UBERON:0007100!2.61e-07!27;UBERON:0004535!3.81e-07!110;UBERON:0002097!7.47e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.94e-09;3!UBERON:0000920;1.94e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.41e-09,3 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0.893922188854576,2.61701557230111,0,0,0,0,0,0.218441372130172,0,0.37129905888014,0.994192127183747,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0,0,0.144846518960824,3.9764297352555,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0.33472061276467,0,0,0,0,1.62028389576352,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.794455084879313,4.87622255272983,0,0.560677600142307,0,0.49333509683432,0.622422070799533,0.538842688278752,0.490385709340376,1.36221684880438,0,0,0,0,0.298897361103602,0,0,0.280901613404497,0,0.245668634623536,0.103325781175765,0,0,1.82032272387605,0.718618141816238,0,0,0,0,0.612975591598039,0.150238058906597,0.226864366320042,2.51145489964407,0.427114777637135,0.635795703478686,1.80054657650641,0.515262646192195,2.31876486041066,0.18611685633159,0.506328996723799,0.68205903612839,2.27190396819703,0.184099797284599,0.323292113637624,1.77504796258307,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0,0.517086863031111,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35632511849868,0.415941723061614,0.535286966391485,0.157702415033935,0.468565659970853,0,2.27407504055985,1.03473071292505,1.32845119707087,0,0,0.783204629850962,0.686286847621712,0,0,0,0.303127571446259,0,0,1.98486246255021,0.460385919864187,1.12264037773229,0.512556597022804,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.462145851343933,0.15350367472613,0.275673144969061,0.429680979473094,0.145016693914229,0.0852266274161009,0.267096106940212,0.661139661443912,0,0.127612712494584,0,0,5.98143458978216,0,0.308033580176089,0.532306030317022,0.869932992075073,0,0.286249773483982,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0.424216295861138,2.26016233240486,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0.286822704408103,0,0,0,0,0.987884678879706,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,1.55832187032068,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,1.5950057986596,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0.360299883542404,0,0.236349546921671,0,0.13480708770837,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.447764408660622,0.934853239388898,0.554805861502613,1.13641803165053,0.251567901752575,0,0.457680136793847,1.96600200892211,0.621748802331122,0.591420599958536,0,0,0.155262956876259,0,1.59505028734797,1.04349012362347,0,0.380805212168795,0,0.727394636810238,0.322231671127465,0.928067519756987,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0.169732529954025,0.212574920101683,0,0,1.59002175326709,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:3048947..3048956,- | |||
}} |
Revision as of 13:06, 10 September 2013
Short description: | p@chr10:3048947..3048956, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:3048947..3048956, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.71e-09 | 3 |
chorionic membrane mesenchymal stem cell | 2.41e-09 | 3 |
perirenal adipocyte cell | 3.80e-08 | 1 |
smooth muscle cell of the pulmonary artery | 5.33e-08 | 1 |
follicular cell of ovary | 1.44e-07 | 1 |
granulosa cell | 1.44e-07 | 1 |
skin fibroblast | 5.00e-07 | 23 |
fibroblast | 6.56e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.41e-09 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.