Personal tools

FFCP PHASE1:Hg19::chr10:7454514..7454525,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:7454514..7454525,-|id=chr10:7454514..7454525,-|ontology_enrichment_celltype=CL:0002619!1.51e-10!3;CL:0002194!1.70e-08!63;CL:0000576!1.70e-08!63;CL:0000040!1.70e-08!63;CL:0000559!1.70e-08!63;CL:0002009!3.97e-08!65;CL:0002057!6.64e-08!42;CL:0000766!1.80e-07!76;CL:0000839!2.67e-07!70;CL:0000860!3.29e-07!45;CL:0000557!3.77e-07!71|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.65e-29!57;UBERON:0005068!5.65e-29!57;UBERON:0006241!5.65e-29!57;UBERON:0007135!5.65e-29!57;UBERON:0007023!4.26e-28!115;UBERON:0005743!1.35e-21!86;UBERON:0001017!3.29e-21!82;UBERON:0002616!5.11e-21!59;UBERON:0003075!4.37e-20!86;UBERON:0007284!4.37e-20!86;UBERON:0002780!3.49e-19!41;UBERON:0001890!3.49e-19!41;UBERON:0006240!3.49e-19!41;UBERON:0000073!7.04e-19!94;UBERON:0001016!7.04e-19!94;UBERON:0002346!7.06e-19!90;UBERON:0000955!1.15e-18!69;UBERON:0006238!1.15e-18!69;UBERON:0003080!1.25e-18!42;UBERON:0001893!1.70e-18!34;UBERON:0002791!9.29e-17!33;UBERON:0002020!6.65e-16!34;UBERON:0003528!6.65e-16!34;UBERON:0001869!1.13e-14!32;UBERON:0003056!5.27e-13!61;UBERON:0003076!7.15e-12!15;UBERON:0003057!7.15e-12!15;UBERON:0002619!2.72e-11!22;UBERON:0001950!3.82e-10!20;UBERON:0000153!5.39e-10!129;UBERON:0007811!5.39e-10!129;UBERON:0002240!5.40e-10!3;UBERON:0000033!7.30e-10!123;UBERON:0000956!9.41e-10!25;UBERON:0000203!9.41e-10!25;UBERON:0002298!9.44e-10!8;UBERON:0004121!2.66e-08!169;UBERON:0002308!3.11e-08!9;UBERON:0000125!3.11e-08!9;UBERON:0000924!5.90e-08!173;UBERON:0006601!5.90e-08!173;UBERON:0009663!3.10e-07!7|ontology_enrichment_uberon_v019=UBERON:0002336;3.99e-50;1!UBERON:0011215;3.99e-50;1!UBERON:0001018;3.99e-50;1!UBERON:0002473;3.99e-50;1!UBERON:0005340;3.99e-50;1!UBERON:0003544;3.99e-50;1!UBERON:0005970;3.99e-50;1!UBERON:0002316;3.99e-50;1!UBERON:0001020;3.99e-50;1!UBERON:0002437;3.99e-50;1!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.42e-50,1;UBERON:0011215,2.42e-50,1;UBERON:0001018,2.42e-50,1;UBERON:0002473,2.42e-50,1;UBERON:0005340,2.42e-50,1;UBERON:0003544,2.42e-50,1;UBERON:0005970,2.42e-50,1;UBERON:0002316,2.42e-50,1;UBERON:0001020,2.42e-50,1;UBERON:0002437,2.42e-50,1;UBERON:0005162,5.56e-26,2;UBERON:0000122,5.56e-26,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0.447830948479849,0.647787332037959,0.515151135268373,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0.689491361473237,0.645484683583826,1.35426486594342,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973865820823666,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,2.04628948090749,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,1.61762719153625,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.546746009922222,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.319267718114302,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.475788130837822,0.526182188502793,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0.573358332605805,0,0.271965960763659,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0.250707539292375,0,0,0,0.413731983447581,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:7454514..7454525,-}}
|DPIdataset=robustDPI
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=S
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr10:7454514..7454525,-
|id=chr10:7454514..7454525,-
|ontology_enrichment_celltype=CL:0002619!1.51e-10!3;CL:0002194!1.70e-08!63;CL:0000576!1.70e-08!63;CL:0000040!1.70e-08!63;CL:0000559!1.70e-08!63;CL:0002009!3.97e-08!65;CL:0002057!6.64e-08!42;CL:0000766!1.80e-07!76;CL:0000839!2.67e-07!70;CL:0000860!3.29e-07!45;CL:0000557!3.77e-07!71
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.65e-29!57;UBERON:0005068!5.65e-29!57;UBERON:0006241!5.65e-29!57;UBERON:0007135!5.65e-29!57;UBERON:0007023!4.26e-28!115;UBERON:0005743!1.35e-21!86;UBERON:0001017!3.29e-21!82;UBERON:0002616!5.11e-21!59;UBERON:0003075!4.37e-20!86;UBERON:0007284!4.37e-20!86;UBERON:0002780!3.49e-19!41;UBERON:0001890!3.49e-19!41;UBERON:0006240!3.49e-19!41;UBERON:0000073!7.04e-19!94;UBERON:0001016!7.04e-19!94;UBERON:0002346!7.06e-19!90;UBERON:0000955!1.15e-18!69;UBERON:0006238!1.15e-18!69;UBERON:0003080!1.25e-18!42;UBERON:0001893!1.70e-18!34;UBERON:0002791!9.29e-17!33;UBERON:0002020!6.65e-16!34;UBERON:0003528!6.65e-16!34;UBERON:0001869!1.13e-14!32;UBERON:0003056!5.27e-13!61;UBERON:0003076!7.15e-12!15;UBERON:0003057!7.15e-12!15;UBERON:0002619!2.72e-11!22;UBERON:0001950!3.82e-10!20;UBERON:0000153!5.39e-10!129;UBERON:0007811!5.39e-10!129;UBERON:0002240!5.40e-10!3;UBERON:0000033!7.30e-10!123;UBERON:0000956!9.41e-10!25;UBERON:0000203!9.41e-10!25;UBERON:0002298!9.44e-10!8;UBERON:0004121!2.66e-08!169;UBERON:0002308!3.11e-08!9;UBERON:0000125!3.11e-08!9;UBERON:0000924!5.90e-08!173;UBERON:0006601!5.90e-08!173;UBERON:0009663!3.10e-07!7
|ontology_enrichment_uberon_v019=UBERON:0002336;3.99e-50;1!UBERON:0011215;3.99e-50;1!UBERON:0001018;3.99e-50;1!UBERON:0002473;3.99e-50;1!UBERON:0005340;3.99e-50;1!UBERON:0003544;3.99e-50;1!UBERON:0005970;3.99e-50;1!UBERON:0002316;3.99e-50;1!UBERON:0001020;3.99e-50;1!UBERON:0002437;3.99e-50;1!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2
|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.42e-50,1;UBERON:0011215,2.42e-50,1;UBERON:0001018,2.42e-50,1;UBERON:0002473,2.42e-50,1;UBERON:0005340,2.42e-50,1;UBERON:0003544,2.42e-50,1;UBERON:0005970,2.42e-50,1;UBERON:0002316,2.42e-50,1;UBERON:0001020,2.42e-50,1;UBERON:0002437,2.42e-50,1;UBERON:0005162,5.56e-26,2;UBERON:0000122,5.56e-26,2
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0.447830948479849,0.647787332037959,0.515151135268373,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0.689491361473237,0.645484683583826,1.35426486594342,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973865820823666,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,2.04628948090749,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,1.61762719153625,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.546746009922222,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.319267718114302,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.475788130837822,0.526182188502793,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0.573358332605805,0,0.271965960763659,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0.250707539292375,0,0,0,0.413731983447581,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr10:7454514..7454525,-
}}

Revision as of 14:20, 10 September 2013

Short description:p@chr10:7454514..7454525, -
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr10:7454514..7454525, -
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
0.5
1.0
1.5
2.0
2.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr10:7454514..7454525,-&oldid=2772157"