FFCP PHASE1:Hg19::chr10:88730088..88730132,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=119385|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=29421|TSSclassifier=W|UniProt=Q8TF27|association_with_transcript=-365bp_to_ENST00000433214,ENST00000437689,NM_133447,uc001kee.2_5end|description=CAGE_peak_1_at_AGAP11_5end|id=chr10:88730088..88730132,+|ontology_enrichment_celltype=CL:0000055!4.56e-09!180;CL:0000057!3.16e-08!75|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000057,8.39e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.19e-13!95;UBERON:0000475!3.45e-10!365;UBERON:0001637!5.39e-09!42;UBERON:0003509!5.39e-09!42;UBERON:0004572!5.39e-09!42;UBERON:0001981!8.84e-08!60;UBERON:0007500!8.84e-08!60;UBERON:0004537!8.84e-08!60;UBERON:0006965!8.84e-08!60;UBERON:0000468!1.38e-07!659;UBERON:0004573!1.79e-07!33;UBERON:0004571!1.79e-07!33;UBERON:0000467!1.86e-07!625;UBERON:0000480!2.87e-07!626;UBERON:0000481!5.70e-07!347;UBERON:0000914!9.43e-07!83;UBERON:0002329!9.43e-07!83;UBERON:0003077!9.43e-07!83;UBERON:0003059!9.43e-07!83;UBERON:0007282!9.43e-07!83;UBERON:0009618!9.43e-07!83;UBERON:0007285!9.43e-07!83|ontology_enrichment_uberon_v019=UBERON:0001637;8.56e-07;42!UBERON:0003509;8.56e-07;42!UBERON:0004572;8.56e-07;42!UBERON:0004573;8.88e-07;33!UBERON:0004571;8.88e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.21e-12,99;UBERON:0001637,1.25e-08,42;UBERON:0003509,1.25e-08,42;UBERON:0004572,1.25e-08,42;UBERON:0005156,4.43e-08,59;UBERON:0000990,4.43e-08,59;UBERON:0004573,2.86e-07,33;UBERON:0004571,2.86e-07,33;UBERON:0003133,3.41e-07,48;UBERON:0004175,5.55e-07,25|phase1_expression=0.363356758541113,1.2846031433459,0.704772020479856,1.0007329835313,0.893922188854576,0,7.59899634504932,0.631719873426831,1.56711376919903,0.245733936501509,0,0.436882744260345,0,2.10402800032079,0.994192127183747,0,2.41077811209591,0.730310090387373,0.487932798790507,0.492484232307152,2.85600967741954,1.88072832886853,0,0.410623275218653,0.125542639594803,0.458480434487708,0.738905305049512,0.865818594450472,0,0,0.309632246632152,3.67768489791571,1.50602959389125,2.9580320813343,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0.689491361473237,0,0,0.376484679085209,0,0,1.53041946185451,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,5.42158728576849,1.50401373190767,1.30361867064741,0.795285947051099,2.91980922181582,0.378139268656271,0.443458794925128,0.263504357079378,2.16115474571226,4.73583874780305,2.59549109949101,0,0,0,0,0,0,0.993812036833525,1.72046919021225,1.04142150482278,0.56530794192401,2.51699661725944,1.37559020970034,1.46296476575767,0.775250277507987,0,0,1.20848795132744,1.52054421143703,2.4406205754817,2.20597848207521,1.62028389576352,0.17859945656816,0,0.450445921933289,0,0.949265659568129,1.28241220751285,0,0,0.872188104285069,1.49091585508596,1.2663051166458,3.17782033951725,3.44203944898576,3.19201543978521,1.12135520028461,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0.756787138224657,1.15235184896,0.70296429550139,0.624320153660641,0.570471821544449,1.64393548606981,0.117434498643765,0.161872944368132,0.561803226808994,2.24569588380383,2.57952066354713,4.02970546585485,1.18800285728205,3.4617370098998,0,3.59309070908119,1.34668891163253,2.75260743718321,0.554128230968366,5.70670907145089,1.22595118319608,1.20190447125277,0.226864366320042,1.79389635688862,1.70845911054854,0.847727604638247,3.60109315301283,4.01904864029912,0.772921620136887,2.79175284497385,1.85653965465393,2.33848812386877,1.00973509697646,1.38074847963449,2.90962902273861,6.03516307278244,1.71278566986988,2.54340888465731,1.15956511897978,0.545492241181669,0.573609190778008,0.365921118388786,0.132529768321485,0.232387885739037,1.0366105501537,0.756962552626885,0,3.12899064659632,7.07565032012174,8.28809528114883,1.39310378409594,5.77503585335668,0.236613600079688,0.674338760312407,0,0.220587945464788,0.871517776369625,0.949082476444386,0.539325232640658,0.784885860501384,1.15424147083917,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,1.22988438543114,0,1.86575485194663,5.62008766288098,2.11110842064425,1.38882667737794,2.6064664424826,4.15973914111831,0,0.231860809950154,0,0.577465791044295,1.85194205030644,0.761016608938393,0,0,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0.708875486211932,4.74660170325096,3.19697332365358,8.81780162079986,0.985326475791887,0.44024217006613,13.4763275101502,10.3766366460212,7.70078843900918,0.380987365753014,1.14596527667483,1.17217447210047,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=119385 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=29421 | |||
|TSSclassifier=W | |||
|UniProt=Q8TF27 | |||
|association_with_transcript=-365bp_to_ENST00000433214,ENST00000437689,NM_133447,uc001kee.2_5end | |||
|description=CAGE_peak_1_at_AGAP11_5end | |||
|id=chr10:88730088..88730132,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.56e-09!180;CL:0000057!3.16e-08!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.39e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.19e-13!95;UBERON:0000475!3.45e-10!365;UBERON:0001637!5.39e-09!42;UBERON:0003509!5.39e-09!42;UBERON:0004572!5.39e-09!42;UBERON:0001981!8.84e-08!60;UBERON:0007500!8.84e-08!60;UBERON:0004537!8.84e-08!60;UBERON:0006965!8.84e-08!60;UBERON:0000468!1.38e-07!659;UBERON:0004573!1.79e-07!33;UBERON:0004571!1.79e-07!33;UBERON:0000467!1.86e-07!625;UBERON:0000480!2.87e-07!626;UBERON:0000481!5.70e-07!347;UBERON:0000914!9.43e-07!83;UBERON:0002329!9.43e-07!83;UBERON:0003077!9.43e-07!83;UBERON:0003059!9.43e-07!83;UBERON:0007282!9.43e-07!83;UBERON:0009618!9.43e-07!83;UBERON:0007285!9.43e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.56e-07;42!UBERON:0003509;8.56e-07;42!UBERON:0004572;8.56e-07;42!UBERON:0004573;8.88e-07;33!UBERON:0004571;8.88e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.21e-12,99;UBERON:0001637,1.25e-08,42;UBERON:0003509,1.25e-08,42;UBERON:0004572,1.25e-08,42;UBERON:0005156,4.43e-08,59;UBERON:0000990,4.43e-08,59;UBERON:0004573,2.86e-07,33;UBERON:0004571,2.86e-07,33;UBERON:0003133,3.41e-07,48;UBERON:0004175,5.55e-07,25 | |||
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| |||
|short_description=p1@AGAP11 | |||
}} |
Revision as of 14:48, 10 September 2013
Short description: | p1@AGAP11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AGAP11_5end |
Coexpression cluster: | NA |
Association with transcript: | -365bp_to_ENST00000433214, ENST00000437689, NM_133447, uc001kee.2_5end |
EntrezGene: | AGAP11 |
HGNC: | 29421 |
UniProt: | Q8TF27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.39e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.21e-12 | 99 |
artery | 1.25e-08 | 42 |
arterial blood vessel | 1.25e-08 | 42 |
arterial system | 1.25e-08 | 42 |
reproductive structure | 4.43e-08 | 59 |
reproductive system | 4.43e-08 | 59 |
systemic artery | 2.86e-07 | 33 |
systemic arterial system | 2.86e-07 | 33 |
reproductive organ | 3.41e-07 | 48 |
internal genitalia | 5.55e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.