FFCP PHASE1:Hg19::chr11:125496619..125496646,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1111|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1925|TSSclassifier=S|UniProt=O14757,E9PPA5|association_with_transcript=0bp_to_ENST00000278916,ENST00000531607,ENST00000532669,uc001qci.1,uc009zbq.2_5end|description=CAGE_peak_4_at_CHEK1_5end|id=chr11:125496619..125496646,+|ontology_enrichment_celltype=CL:0000055!7.77e-22!180;CL:0000548!8.78e-17!679;CL:0000004!8.78e-17!679;CL:0000255!8.78e-17!679;CL:0000012!1.10e-16!682;CL:0002321!5.47e-15!248;CL:0000220!1.26e-14!246;CL:0000222!5.93e-13!119;CL:0000680!2.36e-11!57;CL:0000056!2.36e-11!57;CL:0000355!2.36e-11!57;CL:0000187!4.25e-11!54;CL:0000393!1.01e-10!60;CL:0000211!1.01e-10!60;CL:0000003!1.21e-10!722;CL:0000183!4.34e-10!59;CL:0000066!1.03e-09!254;CL:0000144!1.22e-09!625;CL:0000057!1.50e-09!75;CL:0000192!2.53e-09!42;CL:0000514!2.53e-09!42;CL:0000359!4.53e-07!32|ontology_enrichment_celltype_v019=CL:0000077;4.75e-09;19|ontology_enrichment_celltype_v019_2=CL:0000077,4.11e-09,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.36e-12!83;UBERON:0002329!1.36e-12!83;UBERON:0003077!1.36e-12!83;UBERON:0003059!1.36e-12!83;UBERON:0007282!1.36e-12!83;UBERON:0009618!1.36e-12!83;UBERON:0007285!1.36e-12!83;UBERON:0004290!1.20e-10!70;UBERON:0000486!1.89e-10!82;UBERON:0005256!1.72e-09!143;UBERON:0001134!1.82e-09!61;UBERON:0002036!1.82e-09!61;UBERON:0003082!1.82e-09!61;UBERON:0002385!5.71e-09!63;UBERON:0001015!5.71e-09!63;UBERON:0000383!5.71e-09!63;UBERON:0003104!1.48e-08!238;UBERON:0009142!1.48e-08!238;UBERON:0000490!1.75e-08!138;UBERON:0001637!1.89e-08!42;UBERON:0003509!1.89e-08!42;UBERON:0004572!1.89e-08!42;UBERON:0004573!1.68e-07!33;UBERON:0004571!1.68e-07!33;UBERON:0002100!3.66e-07!216;UBERON:0002049!3.86e-07!79;UBERON:0007798!3.86e-07!79;UBERON:0001737!4.61e-07!9|ontology_enrichment_uberon_v019=UBERON:0001737;2.86e-12;9!UBERON:0001557;2.86e-12;9!UBERON:0005904;3.45e-09;4!UBERON:0006947;2.40e-07;3!UBERON:0004054;2.40e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.04e-12,9;UBERON:0005904,3.49e-09,4;UBERON:0006947,2.50e-07,3;UBERON:0004054,2.50e-07,3|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0.873765488520689,0.791300934685361,1.23766352960047,1.32558950291166,2.01697543935533,3.01347264011988,0.730310090387373,0.975865597581014,0.492484232307152,0,0,0.286235987131057,1.23186982565596,0.376627918784408,0.0764134057479513,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.511450247374121,0.722878304769133,0,0.724232594804119,2.3858578411533,0.486634870302636,1.60709189178915,0.886917589850256,1.40535657109002,0,0,0,0,0,0,0,0,0,0.993812036833525,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0.417989933073621,1.29208379584664,0,0,0.805658634218294,2.28081631715554,0.24406205754817,1.10298924103761,1.62028389576352,1.16089646769304,0,0.112611480483322,0,0,0.549605231791222,0,0,0.436094052142534,0,1.01304409331664,0.794455084879313,1.43418310374407,0.709336764396714,1.12135520028461,2.1349799145941,1.2333377420858,0.311211035399766,0,0.326923806226917,0.605429710579726,0.576175924479999,0.468642863667593,0.936480230490962,0.570471821544449,0.298897361103602,0.587172493218824,0.161872944368132,0.421352420106746,1.22492502752936,0.859840221182376,1.13658359293342,0,0.494533858557114,0,0,0.673344455816265,0.625592599359821,0.831192346452549,0.877955241761676,0.30648779579902,0,0.453728732640084,0.717558542755448,0.213557388818567,0.847727604638247,0.300091096084402,2.06105058476878,0.515281080091258,0.930584281657949,1.35021065793013,1.46155507741798,0.504867548488229,1.01254888506529,2.42469085228218,1.42003837006646,1.61203357164224,0.67824236924195,1.15956511897978,0.545492241181669,0.860413786167011,0.365921118388786,0.662648841607426,0.464775771478074,0.310983165046111,1.00928340350251,0,0,0.643240938192885,1.38134921352481,0.464367928031979,2.16563844500876,1.0647612003586,2.69735504124963,0.723033089650446,2.09558548191549,1.52515610864684,1.42362371466658,2.96628877952362,2.35465758150415,2.30848294167834,0,0,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0.368965315629341,0.514703430895577,0.329250856225877,0,0.201057944823262,0.185176890317059,0,0,5.77325368101093,0.811512834825538,1.05667824812239,0.288732895522148,0,0,0,0.858486162094873,0,0,0.445893486866185,0,1.00789276919316,3.68615252830205,0.895585227028483,0.871901815541886,1.15014803749563,0,0,0,0,0,0.126995788584338,0,0,0,0.308482478109971,0.600686115687835,0,0.448524337381443,0,0.66004457238855,1.03417372606222,0,0,0.79781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,0,1.24329698497822,0.3414369541879,0,0,0.354996002191696,0.255640214277473,17.3588690578281,0,0.31020638566432,0,0,0,0.365753774946808,0,0,0,0,0.233939463462106,0,0.118920090777569,0.45178432815584,0.109940516745429,1.20770274853339,0.0771741581079447,0.218559560503957,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0,0.315543124386369,0.0679914901909147,0.436350690340377,0,1.48798007266701,0,0.432626562123789,0.252332849670158,0.437062287854782,0.380095503034311,1.42784361638774,0.26721740526556,3.03253168464988,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0.33639558774184,0,0,0,0,0,0,0,0,0.106727345877715,0,0.988077223172456,0,0,0.406896178315738,0,0,0|short_description=p4@CHEK1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1111 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1925 | |||
|TSSclassifier=S | |||
|UniProt=O14757,E9PPA5 | |||
|association_with_transcript=0bp_to_ENST00000278916,ENST00000531607,ENST00000532669,uc001qci.1,uc009zbq.2_5end | |||
|description=CAGE_peak_4_at_CHEK1_5end | |||
|id=chr11:125496619..125496646,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.77e-22!180;CL:0000548!8.78e-17!679;CL:0000004!8.78e-17!679;CL:0000255!8.78e-17!679;CL:0000012!1.10e-16!682;CL:0002321!5.47e-15!248;CL:0000220!1.26e-14!246;CL:0000222!5.93e-13!119;CL:0000680!2.36e-11!57;CL:0000056!2.36e-11!57;CL:0000355!2.36e-11!57;CL:0000187!4.25e-11!54;CL:0000393!1.01e-10!60;CL:0000211!1.01e-10!60;CL:0000003!1.21e-10!722;CL:0000183!4.34e-10!59;CL:0000066!1.03e-09!254;CL:0000144!1.22e-09!625;CL:0000057!1.50e-09!75;CL:0000192!2.53e-09!42;CL:0000514!2.53e-09!42;CL:0000359!4.53e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.75e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.11e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.36e-12!83;UBERON:0002329!1.36e-12!83;UBERON:0003077!1.36e-12!83;UBERON:0003059!1.36e-12!83;UBERON:0007282!1.36e-12!83;UBERON:0009618!1.36e-12!83;UBERON:0007285!1.36e-12!83;UBERON:0004290!1.20e-10!70;UBERON:0000486!1.89e-10!82;UBERON:0005256!1.72e-09!143;UBERON:0001134!1.82e-09!61;UBERON:0002036!1.82e-09!61;UBERON:0003082!1.82e-09!61;UBERON:0002385!5.71e-09!63;UBERON:0001015!5.71e-09!63;UBERON:0000383!5.71e-09!63;UBERON:0003104!1.48e-08!238;UBERON:0009142!1.48e-08!238;UBERON:0000490!1.75e-08!138;UBERON:0001637!1.89e-08!42;UBERON:0003509!1.89e-08!42;UBERON:0004572!1.89e-08!42;UBERON:0004573!1.68e-07!33;UBERON:0004571!1.68e-07!33;UBERON:0002100!3.66e-07!216;UBERON:0002049!3.86e-07!79;UBERON:0007798!3.86e-07!79;UBERON:0001737!4.61e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.86e-12;9!UBERON:0001557;2.86e-12;9!UBERON:0005904;3.45e-09;4!UBERON:0006947;2.40e-07;3!UBERON:0004054;2.40e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.04e-12,9;UBERON:0005904,3.49e-09,4;UBERON:0006947,2.50e-07,3;UBERON:0004054,2.50e-07,3 | |||
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| |||
|short_description=p4@CHEK1 | |||
}} |
Revision as of 16:29, 10 September 2013
Short description: | p4@CHEK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CHEK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000278916, ENST00000531607, ENST00000532669, uc001qci.1, uc009zbq.2_5end |
EntrezGene: | CHEK1 |
HGNC: | 1925 |
UniProt: | O14757E9PPA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.11e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.04e-12 | 9 |
duct of male reproductive system | 3.49e-09 | 4 |
male genital duct | 2.50e-07 | 3 |
internal male genitalia | 2.50e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.