FFCP PHASE1:Hg19::chr11:5255521..5255526,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C33|description=CAGE_peak_at_chr11:5255521..5255526,-|id=chr11:5255521..5255526,-|ontology_enrichment_celltype=CL:0000764!8.82e-51!2;CL:0000765!8.82e-51!2;CL:0000050!8.82e-51!2;CL:0000038!8.82e-51!2;CL:0000558!8.82e-51!2;CL:0000547!8.82e-51!2;CL:0000549!8.82e-51!2;CL:0000550!8.82e-51!2;CL:0000552!8.82e-51!2;CL:0002563!1.49e-07!4|ontology_enrichment_celltype_v019=CL:0000764;5.68e-99;2!CL:0000558;5.68e-99;2!CL:0002563;1.21e-13;4|ontology_enrichment_celltype_v019_2=CL:0000764,5.68e-99,2;CL:0000765,5.68e-99,2;CL:0000050,5.68e-99,2;CL:0000038,5.68e-99,2;CL:0000558,5.68e-99,2;CL:0000547,5.68e-99,2;CL:0000549,5.68e-99,2;CL:0000550,5.68e-99,2;CL:0000552,5.68e-99,2;CL:0002563,1.13e-13,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!5.32e-41!15;UBERON:0000179!5.32e-41!15;UBERON:0000463!5.32e-41!15;UBERON:0007023!1.45e-10!115;UBERON:0001242!1.49e-07!4;UBERON:0001262!1.49e-07!4;UBERON:0004786!1.49e-07!4;UBERON:0004808!1.49e-07!4;UBERON:0001277!1.49e-07!4|ontology_enrichment_uberon_v019=UBERON:0001242;1.21e-13;4!UBERON:0001262;1.21e-13;4!UBERON:0004786;1.21e-13;4!UBERON:0004808;1.21e-13;4!UBERON:0001277;1.21e-13;4!UBERON:0000485;2.26e-08;7!UBERON:0003929;2.26e-08;7!UBERON:0003350;1.75e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0003350,1.69e-07,8;UBERON:0000485,8.37e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60445740956463,4.44440266742331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:5255521..5255526,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_at_chr11:5255521..5255526,- | |||
|id=chr11:5255521..5255526,- | |||
|ontology_enrichment_celltype=CL:0000764!8.82e-51!2;CL:0000765!8.82e-51!2;CL:0000050!8.82e-51!2;CL:0000038!8.82e-51!2;CL:0000558!8.82e-51!2;CL:0000547!8.82e-51!2;CL:0000549!8.82e-51!2;CL:0000550!8.82e-51!2;CL:0000552!8.82e-51!2;CL:0002563!1.49e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.68e-99;2!CL:0000558;5.68e-99;2!CL:0002563;1.21e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.68e-99,2;CL:0000765,5.68e-99,2;CL:0000050,5.68e-99,2;CL:0000038,5.68e-99,2;CL:0000558,5.68e-99,2;CL:0000547,5.68e-99,2;CL:0000549,5.68e-99,2;CL:0000550,5.68e-99,2;CL:0000552,5.68e-99,2;CL:0002563,1.13e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.32e-41!15;UBERON:0000179!5.32e-41!15;UBERON:0000463!5.32e-41!15;UBERON:0007023!1.45e-10!115;UBERON:0001242!1.49e-07!4;UBERON:0001262!1.49e-07!4;UBERON:0004786!1.49e-07!4;UBERON:0004808!1.49e-07!4;UBERON:0001277!1.49e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.21e-13;4!UBERON:0001262;1.21e-13;4!UBERON:0004786;1.21e-13;4!UBERON:0004808;1.21e-13;4!UBERON:0001277;1.21e-13;4!UBERON:0000485;2.26e-08;7!UBERON:0003929;2.26e-08;7!UBERON:0003350;1.75e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0003350,1.69e-07,8;UBERON:0000485,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60445740956463,4.44440266742331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:5255521..5255526,- | |||
}} |
Revision as of 18:05, 10 September 2013
Short description: | p@chr11:5255521..5255526, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:5255521..5255526, - |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.68e-99 | 2 |
erythroblast | 5.68e-99 | 2 |
megakaryocyte-erythroid progenitor cell | 5.68e-99 | 2 |
erythroid progenitor cell | 5.68e-99 | 2 |
reticulocyte | 5.68e-99 | 2 |
proerythroblast | 5.68e-99 | 2 |
basophilic erythroblast | 5.68e-99 | 2 |
polychromatophilic erythroblast | 5.68e-99 | 2 |
orthochromatic erythroblast | 5.68e-99 | 2 |
intestinal epithelial cell | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.13e-13 | 4 |
wall of intestine | 1.13e-13 | 4 |
gastrointestinal system mucosa | 1.13e-13 | 4 |
gastrointestinal system epithelium | 1.13e-13 | 4 |
intestinal epithelium | 1.13e-13 | 4 |
epithelium of mucosa | 1.69e-07 | 8 |
simple columnar epithelium | 8.37e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.