FFCP PHASE1:Hg19::chr12:53400176..53400271,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1975|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3285|TSSclassifier=S|UniProt=B4DS13,E7EX17,E7EPC9,F8VRU1,F8VX11,F8VYE9,F8VSC7,F8W0K0,F8VP89|association_with_transcript=0bp_to_ENST00000416762,ENST00000420463,ENST00000430205,ENST00000549077,ENST00000549481,ENST00000549645,ENST00000550390,ENST00000550704,ENST00000551002,ENST00000552490_5end|description=CAGE_peak_1_at_EIF4B_5end|id=chr12:53400176..53400271,+|ontology_enrichment_celltype=CL:0000003!1.77e-07!722|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.63e-08!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,2.63e-08,106|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=7.26713517082227,10.4909256706582,11.2763523276777,5.00366491765652,7.59833860526389,12.2127393374052,17.7309914717817,11.370957721683,12.5369101535922,7.86348596804828,7.6758128476967,8.51921351307672,7.64924236862515,17.0797567084864,10.2733186475654,18.1527789541979,20.4916139528152,30.6730237962697,18.0535135552488,9.11095829768231,6.32402142857184,4.70182082217132,12.0219114595044,8.6230887795917,10.9222096447478,14.5185470921107,18.226330857888,17.4737934516368,9.4407426443737,14.5855171276941,14.0882672217629,11.9524759182261,13.253060426243,11.4623743151704,20.4513409531996,25.4482926152485,12.3312184520636,17.7278530730201,13.6370224279696,11.2845652772243,15.4501677225548,13.6035339727971,18.5454408696614,15.4122133106339,14.3592858601748,12.3717871205786,17.8970358417377,12.7462045286766,14.2464930611748,17.5492359316512,16.6504459243915,10.8781825748749,14.8240642716746,16.1371170895957,17.6054432572644,18.8242339542605,16.1014628534129,11.6856211911444,17.1406979727705,12.1953030288916,12.7867425159808,15.5030111087757,17.5528018707036,8.52449501065388,15.6712988859435,17.0215567407342,10.5879782329248,13.3161792586074,16.1659704710262,13.2485195270121,13.3187890579341,10.3117738076518,13.9243450473989,10.1402537429732,14.457092397623,6.0801007197429,15.5013510982163,15.3180430698336,9.00063285503649,7.98035682475496,16.3111675303254,7.67189445811463,10.5597746676794,6.55366333514558,8.89509253863555,18.3493995703598,8.40831572775626,16.0930683187255,5.94940385506376,8.58648379081828,10.8150464130795,11.1575065980478,11.8504700718821,13.2171328579026,15.1337312005015,17.9101177647052,19.8676867814971,14.5413982217191,18.7097364089553,19.3936334653187,19.881258264649,17.0441210064504,17.534405556712,10.4725829472063,13.5518717438425,17.5011776721061,11.3737622781307,11.9124927344878,10.1446291096705,13.3194702728978,9.94860064029054,12.1717296008722,26.3950082428468,26.4865419808816,20.9071047609954,13.5971211237079,11.1133943144557,8.59068613706575,11.6389058328971,11.4683549156675,11.7195021694155,7.60361635558699,14.605786550544,16.6382594500744,12.4930726552346,13.0227488624209,9.03240796613151,18.9510338631248,14.7092107680929,17.8134016775843,19.5045493051169,15.4261197731836,20.8415975804954,7.95166135246046,6.51739283826656,8.69079113764942,3.9764297352555,7.78615792484217,15.2201055634149,9.53436409089025,11.0671829973339,9.49598297358417,2.91436230634034,9.26961106961073,7.7891374477124,6.26867054277362,5.7171923023112,10.2550968451297,7.43593384014166,8.17206502925043,10.9319324051688,7.74211135595512,7.98423153697467,20.9163938511884,11.3264847776675,13.7559020970034,12.7486929587454,12.4040044401278,14.9421830328418,11.3805008339988,10.0707329277287,9.12326526862215,8.05404789908959,16.1771755352182,6.48113558305408,14.8237548951572,12.3491154944393,13.7386006189653,15.3316637465883,6.6448596169769,7.69447324507711,10.5424333948851,15.511210565933,8.28578699070815,4.47274756525787,14.0559867947684,22.7743790998736,18.0707071071753,9.930714701554,13.4562624034154,12.8098794875646,8.88003174301776,17.7390290177867,13.2016458628294,13.894261764644,15.1357427644931,11.5235184896,10.3101430006871,21.8512053781224,19.3960419325113,15.0943167357319,15.6187883196207,16.6729132699175,18.2586048712923,16.9447962141561,14.0031121735415,16.9454281128255,2.37600571456411,9.1488763833066,5.46096817162816,4.31170885089743,14.8135780279578,12.3867334673245,20.2256804303454,7.46261955497424,5.21029252858333,8.56356935767602,12.5909723307623,20.2710288328414,10.8914268297469,12.7159140695737,17.1051924768109,15.3548268565274,13.1396675423271,10.0503102419058,19.7468308722281,15.1027357999858,20.4471357137733,17.21333104611,16.4878977955188,11.7153165530483,13.0977727695932,11.6996808694236,13.3349988682675,14.4555443913142,14.0534251740612,27.5660575852886,24.7830666761177,19.8691642306876,15.0308529772287,26.2413684910654,22.2636189036256,10.9514672630871,9.00537313470039,2.76269842704961,19.5034529773431,23.8220228950963,21.8867580073711,24.1076106811685,23.1370588688143,25.5882016739154,23.5309799619799,19.9307320053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24276016,9.42280642151737,11.8818560130834,5.9171801861676,4.41810498188324,10.902134485663,11.280130395376,13.3921148939405,11.0703441935508,16.5860589706375,18.7764798052654,5.84269110597214,12.8444199353271,9.03039373854143,27.4522518216141,9.11085968558257,14.3995727812325,8.99345628876181,8.92788043600203,6.93263442947127,9.08515780459957,14.5091388560341,9.50610476084151,14.4436291153038,25.5991962652374,28.3250449581494,53.8504111274191,24.8200463899451,10.3059029576806,11.7904217268719,11.6083721524229,12.2050935117036,10.2352311312471,8.57031953269465,9.75292538523692,10.7389255731834,11.5495818458032,12.347548705964,7.47833599145411,14.3693053611994,8.21359922604674,13.6724667619613,11.4038306574355,10.3124710529264,8.71014974137427,27.4289278905729,1.9307228228694,19.3124184529162,4.69281884806909,14.7912147461268,16.6827433109453,11.9836219353392,10.8687848539154,8.97591778449052|short_description=p1@EIF4B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1975 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3285 | |||
|TSSclassifier=S | |||
|UniProt=B4DS13,E7EX17,E7EPC9,F8VRU1,F8VX11,F8VYE9,F8VSC7,F8W0K0,F8VP89 | |||
|association_with_transcript=0bp_to_ENST00000416762,ENST00000420463,ENST00000430205,ENST00000549077,ENST00000549481,ENST00000549645,ENST00000550390,ENST00000550704,ENST00000551002,ENST00000552490_5end | |||
|description=CAGE_peak_1_at_EIF4B_5end | |||
|id=chr12:53400176..53400271,+ | |||
|ontology_enrichment_celltype=CL:0000003!1.77e-07!722 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.63e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.63e-08,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@EIF4B | |||
}} |
Revision as of 23:15, 10 September 2013
Short description: | p1@EIF4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_EIF4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000416762, ENST00000420463, ENST00000430205, ENST00000549077, ENST00000549481, ENST00000549645, ENST00000550390, ENST00000550704, ENST00000551002, ENST00000552490_5end |
EntrezGene: | EIF4B |
HGNC: | 3285 |
UniProt: | B4DS13E7EX17E7EPC9F8VRU1F8VX11F8VYE9F8VSC7F8W0K0F8VP89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.63e-08 | 106 |
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