FFCP PHASE1:Hg19::chr16:54320158..54320200,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79191|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14360|TSSclassifier=S|UniProt=P78415|association_with_transcript=177bp_to_NM_024336,uc002eht.1_5end|description=CAGE_peak_5_at_IRX3_5end|id=chr16:54320158..54320200,-|ontology_enrichment_celltype=CL:0000055!1.15e-10!180;CL:0000066!1.41e-08!254;CL:0000057!1.48e-07!75|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,3.12e-08,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!4.91e-08!106;DOID:0050687!1.34e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.36e-07,106|ontology_enrichment_uberon=UBERON:0003102!2.13e-14!95;UBERON:0000475!3.34e-10!365;UBERON:0003104!2.20e-09!238;UBERON:0009142!2.20e-09!238;UBERON:0002199!1.15e-07!45;UBERON:0002416!1.15e-07!45;UBERON:0000481!1.83e-07!347;UBERON:0000165!2.75e-07!28;UBERON:0000930!2.75e-07!28;UBERON:0002100!3.07e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.25e-12,99;UBERON:0002199,1.67e-07,46;UBERON:0002416,1.67e-07,46|phase1_expression=1.63510541343501,0.642301571672949,0,1.0007329835313,0,0,2.53299878168311,1.89515962028049,0.783556884599516,0.245733936501509,6.28021051175185,0,0,0.247532705920093,0.662794751455832,0,0,0.730310090387373,0,5.17108443922509,8.97603041474713,14.7323719094701,0.572471974262113,0.547497700291537,0.376627918784408,0,0,0,0,0,0.309632246632152,0,1.8072355126695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,1.80881695064044,0.552700035571697,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,5.78302643815306,2.00535164254356,3.18662341713812,0.795285947051099,0,0,0,0.087834785693126,1.44076983047484,4.00724817121796,4.07862887062872,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,1.3082821564276,2.48485975847659,0.886413581652058,0.662045904066094,0,2.83734705758686,0,0,1.48000529050296,1.24484414159907,0.404132016209064,0.490385709340376,1.96764655938411,1.15235184896,2.10889288650417,2.49728061464256,1.1409436430889,1.79338416662161,1.17434498643765,2.75184005425824,2.94946694074722,0.61246251376468,0.982674538494144,2.27316718586684,2.37600571456411,4.94533858557114,0,2.15585442544872,0.505008341862199,0.500474079487857,1.93944880838928,5.70670907145089,7.96868269077451,5.70904623845068,0.567160915800105,2.51145489964407,4.27114777637135,2.33125091275518,1.80054657650641,0.92747276314595,3.34932702059318,2.97786970130544,2.02531598689519,2.33848812386877,2.01947019395292,3.40584624976508,1.13152239773168,1.06502877754984,0.906768884048762,1.3564847384839,0.386521706326594,4.36393792945335,0.860413786167011,0.487894824518382,0.795178609928912,1.51052125730374,1.65857688024593,0.756962552626885,0,6.25798129319264,2.57296375277154,4.14404764057442,0.464367928031979,1.44375896333917,2.60274960087657,2.19160097101532,2.16909926895134,1.98529150918309,1.08939722046203,1.66089433377768,1.48314438976181,1.37355025587742,2.30848294167834,0,5.60967095213783,0.4115740113314,0,0,0,0,0,4.42758378755209,0.343135620597051,5.92651541206578,2.24803506515239,3.11639814476056,0.555530670951178,4.88712457965487,12.4792174233549,0,0.463721619900307,0.117408694235822,0,0,0.190254152234598,4.74122638775565,4.29243081047436,0,0,0,0.93733833986777,3.19166043577833,2.69372684760534,1.43293636324557,1.74380363108377,3.4504441124869,0,0,0,0.144119953416961,0,4.12736312899099,3.4378958300245,4.68869788840188,1.71072446022705,2.05654985406647,3.60411669412701,0.285826432630578,1.00917975910825,0,0.80672114403045,2.19761916788222,14.3062578340753,2.535908257668,0,0,7.20180647933998,7.09245660116391,10.1240428026118,0.142977993658148,1.62786481617433,2.46972101034231,2.28015329005615,0,1.58390374586686,0,0,0,0,0,0,1.91699884393266,5.7430967917057,1.42636905040718,3.76431397335706,3.49309748335652,7.52056045607561,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.36807447515742,5.00170521059677,5.42530047399471,0.415941723061614,0.178428988797162,0.157702415033935,1.40569697991256,6.3198680942821,6.82222512167955,3.10419213877515,1.99267679560631,3.31864503375066,0.955719759148911,0.391602314925481,4.11772108573027,0,0,0,0,0,0,1.73675465473144,1.38115775959256,1.12264037773229,0.384417447767103,0.511707249066704,0.321707842287215,0,4.31787142647436,3.37367278094941,2.05317890034523,1.03850885836724,1.16210378459959,7.13070752590571,1.80455823272956,3.77532054637175,0.114814448164607,0.546273504020151,0,2.25599806453706,1.30926073077505,11.7652465376528,2.92278449306521,2.95544560900052,0,0.170093705276516,0,0,1.08378575017541,1.50506932156456,1.78413391131527,0.831076008928724,3.1342465661105,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0.721287081534056,4.2121953816438,2.55779449753823,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79191 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14360 | |||
|TSSclassifier=S | |||
|UniProt=P78415 | |||
|association_with_transcript=177bp_to_NM_024336,uc002eht.1_5end | |||
|description=CAGE_peak_5_at_IRX3_5end | |||
|id=chr16:54320158..54320200,- | |||
|ontology_enrichment_celltype=CL:0000055!1.15e-10!180;CL:0000066!1.41e-08!254;CL:0000057!1.48e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.12e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.91e-08!106;DOID:0050687!1.34e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.36e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.13e-14!95;UBERON:0000475!3.34e-10!365;UBERON:0003104!2.20e-09!238;UBERON:0009142!2.20e-09!238;UBERON:0002199!1.15e-07!45;UBERON:0002416!1.15e-07!45;UBERON:0000481!1.83e-07!347;UBERON:0000165!2.75e-07!28;UBERON:0000930!2.75e-07!28;UBERON:0002100!3.07e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.25e-12,99;UBERON:0002199,1.67e-07,46;UBERON:0002416,1.67e-07,46 | |||
|phase1_expression=1.63510541343501,0.642301571672949,0,1.0007329835313,0,0,2.53299878168311,1.89515962028049,0.783556884599516,0.245733936501509,6.28021051175185,0,0,0.247532705920093,0.662794751455832,0,0,0.730310090387373,0,5.17108443922509,8.97603041474713,14.7323719094701,0.572471974262113,0.547497700291537,0.376627918784408,0,0,0,0,0,0.309632246632152,0,1.8072355126695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,1.80881695064044,0.552700035571697,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,5.78302643815306,2.00535164254356,3.18662341713812,0.795285947051099,0,0,0,0.087834785693126,1.44076983047484,4.00724817121796,4.07862887062872,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,1.3082821564276,2.48485975847659,0.886413581652058,0.662045904066094,0,2.83734705758686,0,0,1.48000529050296,1.24484414159907,0.404132016209064,0.490385709340376,1.96764655938411,1.15235184896,2.10889288650417,2.49728061464256,1.1409436430889,1.79338416662161,1.17434498643765,2.75184005425824,2.94946694074722,0.61246251376468,0.982674538494144,2.27316718586684,2.37600571456411,4.94533858557114,0,2.15585442544872,0.505008341862199,0.500474079487857,1.93944880838928,5.70670907145089,7.96868269077451,5.70904623845068,0.567160915800105,2.51145489964407,4.27114777637135,2.33125091275518,1.80054657650641,0.92747276314595,3.34932702059318,2.97786970130544,2.02531598689519,2.33848812386877,2.01947019395292,3.40584624976508,1.13152239773168,1.06502877754984,0.906768884048762,1.3564847384839,0.386521706326594,4.36393792945335,0.860413786167011,0.487894824518382,0.795178609928912,1.51052125730374,1.65857688024593,0.756962552626885,0,6.25798129319264,2.57296375277154,4.14404764057442,0.464367928031979,1.44375896333917,2.60274960087657,2.19160097101532,2.16909926895134,1.98529150918309,1.08939722046203,1.66089433377768,1.48314438976181,1.37355025587742,2.30848294167834,0,5.60967095213783,0.4115740113314,0,0,0,0,0,4.42758378755209,0.343135620597051,5.92651541206578,2.24803506515239,3.11639814476056,0.555530670951178,4.88712457965487,12.4792174233549,0,0.463721619900307,0.117408694235822,0,0,0.190254152234598,4.74122638775565,4.29243081047436,0,0,0,0.93733833986777,3.19166043577833,2.69372684760534,1.43293636324557,1.74380363108377,3.4504441124869,0,0,0,0.144119953416961,0,4.12736312899099,3.4378958300245,4.68869788840188,1.71072446022705,2.05654985406647,3.60411669412701,0.285826432630578,1.00917975910825,0,0.80672114403045,2.19761916788222,14.3062578340753,2.535908257668,0,0,7.20180647933998,7.09245660116391,10.1240428026118,0.142977993658148,1.62786481617433,2.46972101034231,2.28015329005615,0,1.58390374586686,0,0,0,0,0,0,1.91699884393266,5.7430967917057,1.42636905040718,3.76431397335706,3.49309748335652,7.52056045607561,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.36807447515742,5.00170521059677,5.42530047399471,0.415941723061614,0.178428988797162,0.157702415033935,1.40569697991256,6.3198680942821,6.82222512167955,3.10419213877515,1.99267679560631,3.31864503375066,0.955719759148911,0.391602314925481,4.11772108573027,0,0,0,0,0,0,1.73675465473144,1.38115775959256,1.12264037773229,0.384417447767103,0.511707249066704,0.321707842287215,0,4.31787142647436,3.37367278094941,2.05317890034523,1.03850885836724,1.16210378459959,7.13070752590571,1.80455823272956,3.77532054637175,0.114814448164607,0.546273504020151,0,2.25599806453706,1.30926073077505,11.7652465376528,2.92278449306521,2.95544560900052,0,0.170093705276516,0,0,1.08378575017541,1.50506932156456,1.78413391131527,0.831076008928724,3.1342465661105,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0.721287081534056,4.2121953816438,2.55779449753823,3.44559322797703,7.80072295243825,0,3.57681657680851,0.308097234229289,0.921022048356777,2.89456802217514,0.429680979473094,0.145016693914229,1.19317278382541,2.67096106940212,0.991709492165869,2.69066094311149,0.638063562472921,3.0347334256665,0.464845549297286,0.62962469366128,2.0911118104818,2.7723022215848,2.12922412126809,1.73986598415015,4.633105477598,0.286249773483982,0.372158369359667,2.84741482246853,0.571890581771475,0,0,5.09125196681499,3.13979456079692,0,0.274537029736055,0.235624804691373,3.43710218674637,0,3.37006764991185,0.48763373908959,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,1.75380354101505,0,0,0.405820753925408,0,2.53526042279017,1.57752487424457,0.687743287091848,0,0,2.53329162357197,6.58589785919804,1.89736586882858,11.8977804883294,1.05844323998063,0.670302275535787,0,0.941438007767792,0.86101074534246,5.05414427002877,3.54744122829341,1.83778720165568,0,0,0,0,0,0,0,0,0,0.962479855263359,3.18552280775341,0,0.144269212976445,0.569134746787313,5.10164072732231,0,0,0,6.49243880549111,0.842391534340376,1.59764275323235,1.88015874927628,7.51903431270201,0,0.1605880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| |||
|short_description=p5@IRX3 | |||
}} |
Revision as of 10:43, 11 September 2013
Short description: | p5@IRX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_IRX3_5end |
Coexpression cluster: | NA |
Association with transcript: | 177bp_to_NM_024336, uc002eht.1_5end |
EntrezGene: | IRX3 |
HGNC: | 14360 |
UniProt: | P78415 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.12e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.25e-12 | 99 |
integument | 1.67e-07 | 46 |
integumental system | 1.67e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.36e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.