FFCP PHASE1:Hg19::chr1:115269663..115269678,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7812|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=29905|TSSclassifier=S|UniProt=|association_with_transcript=9bp_to_AK130392_5end|description=CAGE_peak_5_at_CSDE1_5end|id=chr1:115269663..115269678,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=1.2717486548939,5.78071414505655,0.563817616383885,7.00513088471913,3.12872766099101,5.23403114460221,2.53299878168311,1.26343974685366,2.61185628199839,0,0.697801167972428,0.218441372130172,0,1.98026164736075,1.65698687863958,2.01697543935533,1.80808358407193,3.65155045193687,2.43966399395253,0.246242116153576,0.204000691244253,0,1.14494394852423,2.87436292653057,0.502170558379211,1.98674854944673,1.14940825229924,0.708397031823113,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0.739508020333575,0.542270404062111,1.13735385989937,0.293600439334847,0.553995408531877,3.00816671205213,0.651032612147555,0.895661896959697,0,1.03030227053675,1.45398238779565,1.13362783106643,1.4555043671269,0.929716147622738,0.411167888021826,0.309706370895104,0.575384784644301,0.768482119587302,0.47296445977717,1.03423704220986,0.645484683583826,0,2.44715041405386,0.545812300115692,0.898893937780338,0.612167784741805,0,0.639337125799041,2.63881040149373,0.997318288108159,0.426224750532694,4.06292934080018,0.56738522469114,0.622822248995575,2.76373531782418,3.12889751052121,2.38907729175628,1.81619850790011,0.736555271975129,0.632924774881769,1.26753171787165,0.637812899895131,0.628975936525128,0.898629049171961,0.901061357049038,0.16072558669708,1.14005097496499,0.99458338599545,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,1.17447437874188,0.382273228125229,0,0,0.263384084775077,0.196709770113833,6.28817220398664,1.85041349099558,0.334372990781356,0.651844533267181,1.89379122293893,1.94826728407911,0.779873198196215,0.589211814949674,0.443067789167242,0,1.0247305578054,0.520237390239513,1.47994114143309,0.829050053357545,1.15921234294021,0.889719378972363,1.07016331235885,1.04535523804977,0.906474741580529,0.383220493601921,1.37450978193052,0.759059076058509,0.637130828648193,0.651083453856419,2.85135613334512,0.150575119077773,0.383959833463255,1.24930726552346,0.947109008176067,0,0.604820229674197,1.87208137048455,0.868946423296794,0,2.68280343881454,0.639312809217652,1.0843174571537,0.50133791063589,2.462390822334,0.795285947051099,1.45990461090791,1.51255707462509,1.77383517970051,1.75669571386252,0.654895377488563,0,0,1.29818957461873,2.08955684759121,2.92507513141503,0.715471872916026,0,0.371457501329565,0.79504962946682,0,0,0,0.419499436209906,2.47606237746061,1.04497483268405,1.03366703667732,0.35576626268671,0,0,0.760272105718513,0.976248230192678,0,2.43042584364528,0.803697554556718,0.673588117878509,0.112611480483322,0,0,1.46561395144326,0,0,0.436094052142534,0.496971951695318,1.39293562831038,0.529636723252875,0.573673241497627,2.4826786753885,2.24271040056923,1.06748995729705,0.98667019366864,0,1.34710672069688,1.9615428373615,0.151357427644931,0.576175924479999,0.234321431833797,1.5608003841516,0,1.34503812496621,1.17434498643765,0.485618833104395,0.280901613404497,0.204154171254893,2.33385202892359,0.826606249406124,0,2.22540236350701,0,0,1.34668891163253,0.750711119231785,0.277064115484183,0,2.45190236639216,1.50238058906597,1.92834711372036,0.89694817844431,1.06778694409284,1.05965950579781,0.600182192168805,0.92747276314595,2.83404594050192,1.48893485065272,0.337552664482532,0.68205903612839,0.757301322732344,1.10459878370759,1.93975268182574,0.710019185033229,1.30977727695932,1.52604533079439,1.35282597214308,0,0,1.09776335516636,0.662648841607426,1.51052125730374,1.65857688024593,1.7662459561294,2.18986415445498,0,2.57296375277154,1.38134921352481,2.78620756819187,2.88751792667834,0.473227200159376,2.02301628093722,1.44606617930089,1.65440959098591,0.653638332277218,2.37270619111097,1.61797569792197,1.56977172100277,1.53898862778556,0,0,0,0,3.80265104465493,3.9313088667105,2.36315962672562,2.20731549707325,0.368965315629341,0.171567810298526,1.20725313949488,0,1.70899253099772,1.85176890317059,0,0,0,0.579652024875384,0.587043471179108,0.721832238805369,3.24089858803628,3.04406643575357,5.53143078571493,4.29243081047436,0.984868024349589,0.234004265139238,1.0404181360211,0,1.51183915378974,0.425325291727159,0.268675568108545,1.74380363108377,1.15014803749563,0,0.264145302039678,0.621984346622316,0.144119953416961,0.12624243342638,0.698476837213859,0,0,0,0.925447434329912,1.20137223137567,0.285826432630578,0,0,1.10007428731425,0.904902010304444,0,3.381211010224,2.12750493267896,2.08014873822732,0.514414748524284,0,0,1.57275793023962,1.08524321078289,0.823240336780769,2.2801532900561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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7812 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29905 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=9bp_to_AK130392_5end | |||
|description=CAGE_peak_5_at_CSDE1_5end | |||
|id=chr1:115269663..115269678,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@CSDE1 | |||
}} |
Revision as of 23:40, 11 September 2013
Short description: | p5@CSDE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CSDE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_AK130392_5end |
EntrezGene: | CSDE1 |
HGNC: | 29905 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.