FFCP PHASE1:Hg19::chr1:119543967..119543989,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=25bp_to_ENST00000439394_5end|description=CAGE_peak_1_at_ENST00000439394_5end|id=chr1:119543967..119543989,-|ontology_enrichment_celltype=CL:0002620!1.66e-12!23;CL:0002559!5.59e-08!4|ontology_enrichment_celltype_v019=CL:0002559;2.43e-20;5!CL:0000346;1.32e-15;3!CL:1000428;1.32e-15;3!CL:0000136;6.84e-14;13!CL:0002561;8.52e-07;2|ontology_enrichment_celltype_v019_2=CL:0002559,1.86e-20,5;CL:0000346,1.06e-15,3;CL:1000428,1.06e-15,3;CL:0000136,3.85e-12,15;CL:0002561,8.06e-07,2|ontology_enrichment_development_v019=UBERON:0010115;7.43e-13;1|ontology_enrichment_disease=DOID:17!3.33e-08!5;DOID:450!3.33e-08!5;DOID:66!3.33e-08!5;DOID:423!3.33e-08!5;DOID:0080000!3.33e-08!5;DOID:11722!3.33e-08!5|ontology_enrichment_disease_v019=DOID:5662;2.46e-12;1|ontology_enrichment_disease_v019_2=DOID:5662,4.81e-12,1|ontology_enrichment_uberon=UBERON:0002097!1.22e-11!40;UBERON:0002199!5.41e-11!45;UBERON:0002416!5.41e-11!45;UBERON:0002073!5.59e-08!4;UBERON:0005086!5.59e-08!4;UBERON:0002067!6.46e-07!9;UBERON:0004016!6.46e-07!9;UBERON:0010083!6.46e-07!9;UBERON:0007023!6.58e-07!115|ontology_enrichment_uberon_v019=UBERON:0002073;2.43e-20;5!UBERON:0000412;1.32e-15;3!UBERON:0001992;1.32e-15;3!UBERON:0002363;7.43e-13;1!UBERON:0007029;2.46e-12;1!UBERON:0001003;5.76e-12;15!UBERON:0007376;5.76e-12;15!UBERON:0002360;4.69e-07;2!UBERON:0000094;4.69e-07;2!UBERON:0010743;4.69e-07;2!UBERON:0005933;8.52e-07;2!UBERON:0005942;8.52e-07;2!UBERON:0005932;8.52e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.86e-20,5;UBERON:0005086,1.86e-20,5;UBERON:0000412,1.06e-15,3;UBERON:0001992,1.06e-15,3;UBERON:0002363,7.03e-13,1;UBERON:0007645,7.03e-13,1;UBERON:0007647,7.03e-13,1;UBERON:0010115,7.03e-13,1;UBERON:0007029,1.25e-12,1;UBERON:0001003,4.32e-12,15;UBERON:0007376,4.32e-12,15;UBERON:0007383,4.32e-12,15;UBERON:0002360,4.56e-07,2;UBERON:0000094,4.56e-07,2;UBERON:0010743,4.56e-07,2;UBERON:0005933,8.06e-07,2;UBERON:0005942,8.06e-07,2;UBERON:0005932,8.06e-07,2|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869079113764942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0.587172493218824,0,0.421352420106746,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,1.06778694409284,0.211931901159562,0.300091096084402,0.309157587715317,0.772921620136887,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.368199594569197,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,1.38895653772983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920771839728375,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.966782203814463,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,3.22317994398167,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,8.71974798873134,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0.391102765469606,0.160317640503067,0,0.39961921916426,0,0,0.171594997861965,8.06706868733638,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,1.5041393641362,1.83807346058077,3.27872630709804,0,0.886068179966986,0,0.1251909307065,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENST00000439394_5end | |||
|description=CAGE_peak_1_at_ENST00000439394_5end | |||
|id=chr1:119543967..119543989,- | |||
|ontology_enrichment_celltype=CL:0002620!1.66e-12!23;CL:0002559!5.59e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002559;2.43e-20;5!CL:0000346;1.32e-15;3!CL:1000428;1.32e-15;3!CL:0000136;6.84e-14;13!CL:0002561;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,1.86e-20,5;CL:0000346,1.06e-15,3;CL:1000428,1.06e-15,3;CL:0000136,3.85e-12,15;CL:0002561,8.06e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010115;7.43e-13;1 | |||
|ontology_enrichment_disease=DOID:17!3.33e-08!5;DOID:450!3.33e-08!5;DOID:66!3.33e-08!5;DOID:423!3.33e-08!5;DOID:0080000!3.33e-08!5;DOID:11722!3.33e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:5662;2.46e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,4.81e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.22e-11!40;UBERON:0002199!5.41e-11!45;UBERON:0002416!5.41e-11!45;UBERON:0002073!5.59e-08!4;UBERON:0005086!5.59e-08!4;UBERON:0002067!6.46e-07!9;UBERON:0004016!6.46e-07!9;UBERON:0010083!6.46e-07!9;UBERON:0007023!6.58e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;2.43e-20;5!UBERON:0000412;1.32e-15;3!UBERON:0001992;1.32e-15;3!UBERON:0002363;7.43e-13;1!UBERON:0007029;2.46e-12;1!UBERON:0001003;5.76e-12;15!UBERON:0007376;5.76e-12;15!UBERON:0002360;4.69e-07;2!UBERON:0000094;4.69e-07;2!UBERON:0010743;4.69e-07;2!UBERON:0005933;8.52e-07;2!UBERON:0005942;8.52e-07;2!UBERON:0005932;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.86e-20,5;UBERON:0005086,1.86e-20,5;UBERON:0000412,1.06e-15,3;UBERON:0001992,1.06e-15,3;UBERON:0002363,7.03e-13,1;UBERON:0007645,7.03e-13,1;UBERON:0007647,7.03e-13,1;UBERON:0010115,7.03e-13,1;UBERON:0007029,1.25e-12,1;UBERON:0001003,4.32e-12,15;UBERON:0007376,4.32e-12,15;UBERON:0007383,4.32e-12,15;UBERON:0002360,4.56e-07,2;UBERON:0000094,4.56e-07,2;UBERON:0010743,4.56e-07,2;UBERON:0005933,8.06e-07,2;UBERON:0005942,8.06e-07,2;UBERON:0005932,8.06e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869079113764942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0.587172493218824,0,0.421352420106746,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,1.06778694409284,0.211931901159562,0.300091096084402,0.309157587715317,0.772921620136887,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.368199594569197,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,1.38895653772983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920771839728375,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.966782203814463,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,3.22317994398167,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,8.71974798873134,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0.391102765469606,0.160317640503067,0,0.39961921916426,0,0,0.171594997861965,8.06706868733638,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,1.5041393641362,1.83807346058077,3.27872630709804,0,0.886068179966986,0,0.1251909307065,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0.591424344868181,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,1.02892805662451,0.135939465953663,0,0,0,0,0,0.280272163313789,0,1.07963795609311,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.170426809518315,0,0,0,0,0.223710863595585,0.196300467230486,0,0,0.615976841137482,1.1598144313382,1.94284397223656,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0,2.113278637917,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0.426467963801962,0,0,0,0.224263725161227,0.12729431655633,0.202117188958219,0,0,0.134704106029175,0.286888821570705,0.665320713092027,0.162806537221949,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@ENST00000439394 | |||
}} |
Revision as of 23:49, 11 September 2013
Short description: | p1@ENST00000439394 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000439394_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000439394_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 1.86e-20 | 5 |
hair follicle dermal papilla cell | 1.06e-15 | 3 |
stem cell of epidermis | 1.06e-15 | 3 |
fat cell | 3.85e-12 | 15 |
outer root sheath cell | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 1.86e-20 | 5 |
hair follicle placode | 1.86e-20 | 5 |
dermal papilla | 1.06e-15 | 3 |
papillary layer of dermis | 1.06e-15 | 3 |
dura mater | 7.03e-13 | 1 |
future meninx | 7.03e-13 | 1 |
ectomeninx | 7.03e-13 | 1 |
future dura mater | 7.03e-13 | 1 |
surface | 1.25e-12 | 1 |
skin epidermis | 4.32e-12 | 15 |
outer epithelium | 4.32e-12 | 15 |
enveloping layer of ectoderm | 4.32e-12 | 15 |
meninx | 4.56e-07 | 2 |
membrane organ | 4.56e-07 | 2 |
meningeal cluster | 4.56e-07 | 2 |
hair root sheath | 8.06e-07 | 2 |
hair outer root sheath | 8.06e-07 | 2 |
bulb of hair follicle | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 4.81e-12 | 1 |
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