FFCP PHASE1:Hg19::chr1:156571248..156571253,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54865|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25982|TSSclassifier=S|UniProt=E9PPY4|association_with_transcript=0bp_to_ENST00000463513_5end|description=CAGE_peak_3_at_GPATCH4_5end|id=chr1:156571248..156571253,-|ontology_enrichment_celltype=CL:0000066!7.12e-08!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;8.83e-09;29|ontology_enrichment_disease=DOID:162!8.02e-33!235;DOID:14566!1.09e-32!239;DOID:0050687!1.87e-18!143;DOID:305!1.14e-15!106;DOID:0050686!1.39e-13!137;DOID:2531!9.23e-11!51;DOID:0060083!9.23e-11!51;DOID:1240!7.91e-08!39;DOID:8692!1.53e-07!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:162,1.16e-21,235;DOID:14566,7.21e-21,239;DOID:0050687,3.27e-11,143;DOID:305,4.69e-10,106;DOID:0050686,1.33e-08,137;DOID:2531,2.88e-07,51;DOID:0060083,2.88e-07,51|ontology_enrichment_uberon=UBERON:0001737!5.32e-07!9|ontology_enrichment_uberon_v019=UBERON:0001737;5.54e-16;9!UBERON:0001557;5.54e-16;9|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.09e-16,9;UBERON:0001557,9.71e-07,19|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0.502170558379211,1.29902789771517,1.9704141467987,1.25937250101887,0,0,0.309632246632152,0,0,0.369754010166788,0.92960640696362,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0.852449501065388,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0.422510572623884,0.212604299965044,0,0,0.300353785683013,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,1.90810750907073,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.590129310341499,0.786021525498329,0.616804496998528,0.167186495390678,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0.535081656179426,1.04535523804977,0.113309342697566,0.383220493601921,0.68725489096526,0.506039384039006,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.392937226493138,0.364295288292542,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0.39752481473341,0,0,0,0.838998872419812,0,0.626984899610432,0,0,0.33472061276467,1.20848795132744,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0.529636723252875,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0.622422070799533,0,0.163461903113459,0,0,0.937285727335186,0,0,0.448346041655403,0.587172493218824,0.323745888736263,0.561803226808994,0.408308342509787,0.491337269247072,0.309977343527296,1.18800285728205,0.247266929278557,0,0.718618141816238,0.336672227908132,0.625592599359821,0.277064115484183,0,0.30648779579902,0,0.567160915800105,0.358779271377724,0.213557388818567,0.423863802319124,0.300091096084402,0.309157587715317,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.161646056818812,0,0.10075209822764,0.508681776931463,0,0,0.286804595389004,0.243947412259191,0.927708378250397,0.580969714347592,0.207322110030741,0.504641701751257,0.72995471815166,0,0,0,0,0,1.0647612003586,3.03452442140583,3.85617647813571,1.65440959098591,2.39667388501647,3.55905928666645,1.07865046528132,0.784885860501384,1.92373578473195,0,1.40241773803446,0,0,0,0,0.590789906681404,1.7658523976586,0.737930631258681,0,0.768251997860379,0,0.201057944823262,0.185176890317059,0.325808305310325,0,1.44331342025273,0.231860809950154,0.352226082707465,0.288732895522148,0.462985512576611,0.570762456703795,0.790204397959275,0.858486162094873,0,0,0.297262324577456,0.93733833986777,0.335964256397719,0.425325291727159,0.447792613514241,0.871901815541886,0.383382679165211,1.47798971368783,0.088048434013226,0,0.288239906833923,0.25248486685276,0.253991577168676,0,0,0,0.205654985406647,0.300343057843917,0,0.224262168690721,0.43596006883328,0.5867062865676,0.387815147273333,0,0.845302752556,0.26593811658487,0,0.257207374262142,1.41849132023278,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,1.42636905040718,0.289562613335158,0.61642896765115,0.358121926479791,0.336255431980582,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0.542530047399471,0,0.178428988797162,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0.737476674166813,0.0868836144680828,0,0,0,0.431428401637234,0.213455115606889,0.909382714338778,0,0.30239029332968,0.248107807818777,0.460385919864187,0,0.256278298511402,0,0.160853921143607,0,0.616838775210622,0.532685175939381,0.410635780069046,0.519254429183621,0.3486311353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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54865 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25982 | |||
|TSSclassifier=S | |||
|UniProt=E9PPY4 | |||
|association_with_transcript=0bp_to_ENST00000463513_5end | |||
|description=CAGE_peak_3_at_GPATCH4_5end | |||
|id=chr1:156571248..156571253,- | |||
|ontology_enrichment_celltype=CL:0000066!7.12e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.83e-09;29 | |||
|ontology_enrichment_disease=DOID:162!8.02e-33!235;DOID:14566!1.09e-32!239;DOID:0050687!1.87e-18!143;DOID:305!1.14e-15!106;DOID:0050686!1.39e-13!137;DOID:2531!9.23e-11!51;DOID:0060083!9.23e-11!51;DOID:1240!7.91e-08!39;DOID:8692!1.53e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.16e-21,235;DOID:14566,7.21e-21,239;DOID:0050687,3.27e-11,143;DOID:305,4.69e-10,106;DOID:0050686,1.33e-08,137;DOID:2531,2.88e-07,51;DOID:0060083,2.88e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.32e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.54e-16;9!UBERON:0001557;5.54e-16;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.09e-16,9;UBERON:0001557,9.71e-07,19 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0.502170558379211,1.29902789771517,1.9704141467987,1.25937250101887,0,0,0.309632246632152,0,0,0.369754010166788,0.92960640696362,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0.852449501065388,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0.422510572623884,0.212604299965044,0,0,0.300353785683013,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,1.90810750907073,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.590129310341499,0.786021525498329,0.616804496998528,0.167186495390678,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0.535081656179426,1.04535523804977,0.113309342697566,0.383220493601921,0.68725489096526,0.506039384039006,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.392937226493138,0.364295288292542,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0.39752481473341,0,0,0,0.838998872419812,0,0.626984899610432,0,0,0.33472061276467,1.20848795132744,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0.529636723252875,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0.622422070799533,0,0.163461903113459,0,0,0.937285727335186,0,0,0.448346041655403,0.587172493218824,0.323745888736263,0.561803226808994,0.408308342509787,0.491337269247072,0.309977343527296,1.18800285728205,0.247266929278557,0,0.718618141816238,0.336672227908132,0.625592599359821,0.277064115484183,0,0.30648779579902,0,0.567160915800105,0.358779271377724,0.213557388818567,0.423863802319124,0.300091096084402,0.309157587715317,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.161646056818812,0,0.10075209822764,0.508681776931463,0,0,0.286804595389004,0.243947412259191,0.927708378250397,0.580969714347592,0.207322110030741,0.504641701751257,0.72995471815166,0,0,0,0,0,1.0647612003586,3.03452442140583,3.85617647813571,1.65440959098591,2.39667388501647,3.55905928666645,1.07865046528132,0.784885860501384,1.92373578473195,0,1.40241773803446,0,0,0,0,0.590789906681404,1.7658523976586,0.737930631258681,0,0.768251997860379,0,0.201057944823262,0.185176890317059,0.325808305310325,0,1.44331342025273,0.231860809950154,0.352226082707465,0.288732895522148,0.462985512576611,0.570762456703795,0.790204397959275,0.858486162094873,0,0,0.297262324577456,0.93733833986777,0.335964256397719,0.425325291727159,0.447792613514241,0.871901815541886,0.383382679165211,1.47798971368783,0.088048434013226,0,0.288239906833923,0.25248486685276,0.253991577168676,0,0,0,0.205654985406647,0.300343057843917,0,0.224262168690721,0.43596006883328,0.5867062865676,0.387815147273333,0,0.845302752556,0.26593811658487,0,0.257207374262142,1.41849132023278,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,1.42636905040718,0.289562613335158,0.61642896765115,0.358121926479791,0.336255431980582,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0.542530047399471,0,0.178428988797162,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0.737476674166813,0.0868836144680828,0,0,0,0.431428401637234,0.213455115606889,0.909382714338778,0,0.30239029332968,0.248107807818777,0.460385919864187,0,0.256278298511402,0,0.160853921143607,0,0.616838775210622,0.532685175939381,0.410635780069046,0.519254429183621,0.348631135379878,1.32945394550784,0.40101294060657,0.368323955743585,0.574072240823034,0.546273504020151,0,0.451199612907412,0.0770153371044148,0.784349769176855,1.46139224653261,0,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0.447749509444357,0.438519753291869,0,0.256450125116389,0,0,0.206082023295445,0.732555718546747,0.495056999523528,0.574265537996172,2.60024098414608,1.6068392984416,0.676695028044854,0.770243085573222,0.307007349452259,0.689182862422653,0.322260734604821,0.435050081742686,0.426133137080504,0.801288320820636,0.826424576804891,0.768760269460425,0.382838137483752,0.10115778085555,0,0.31481234683064,0,0,1.06461206063404,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0.551365343546124,0,0,0,0.655894752046633,0.202910376962704,0,0.563391205064483,0.430234056612155,0.0982490410131212,0,0,0,0,0.75894634753143,0,0.192444225451024,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,1.58625035258854,0.961416640147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| |||
|short_description=p3@GPATCH4 | |||
}} |
Revision as of 00:55, 12 September 2013
Short description: | p3@GPATCH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GPATCH4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000463513_5end |
EntrezGene: | GPATCH4 |
HGNC: | 25982 |
UniProt: | E9PPY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 5.09e-16 | 9 |
upper respiratory tract | 9.71e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.16e-21 | 235 |
disease of cellular proliferation | 7.21e-21 | 239 |
cell type cancer | 3.27e-11 | 143 |
carcinoma | 4.69e-10 | 106 |
organ system cancer | 1.33e-08 | 137 |
hematologic cancer | 2.88e-07 | 51 |
immune system cancer | 2.88e-07 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.