FFCP PHASE1:Hg19::chr1:98493062..98493066,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:98493062..98493066,-|id=chr1:98493062..98493066,-|ontology_enrichment_celltype=CL:0000076!4.00e-08!62;CL:0000077!9.30e-08!19;CL:0000174!4.45e-07!3|ontology_enrichment_celltype_v019=CL:0000319;2.21e-15;1!CL:0002535;1.55e-08;2!CL:0000159;2.40e-08;2|ontology_enrichment_celltype_v019_2=CL:0000319,3.17e-15,1;CL:0002535,1.39e-08,2;CL:0000159,2.87e-08,2|ontology_enrichment_development_v019=UBERON:0007123;2.38e-12;5|ontology_enrichment_disease=DOID:162!1.11e-30!235;DOID:14566!1.18e-29!239;DOID:0050687!8.00e-20!143;DOID:305!1.50e-16!106;DOID:1749!1.13e-14!14;DOID:0050686!2.43e-11!137;DOID:3119!1.24e-08!14;DOID:4556!8.74e-07!3|ontology_enrichment_disease_v019=DOID:3030;2.21e-15;1!DOID:1749;8.57e-10;14!DOID:154;1.25e-08;2!DOID:4236;1.25e-08;2!DOID:1909;1.25e-08;2!DOID:4231;1.55e-08;2!DOID:1907;1.55e-08;2!DOID:4074;2.40e-08;2!DOID:4905;2.40e-08;2!DOID:3498;2.40e-08;2|ontology_enrichment_disease_v019_2=DOID:3030,3.17e-15,1;DOID:1749,8.70e-10,14;DOID:0050687,6.60e-09,143;DOID:162,7.75e-09,235;DOID:154,1.20e-08,2;DOID:4236,1.20e-08,2;DOID:14566,1.27e-08,239;DOID:1909,1.29e-08,2;DOID:4231,1.50e-08,2;DOID:1907,1.50e-08,2;DOID:4074,1.86e-08,2;DOID:4905,1.86e-08,2;DOID:3498,1.86e-08,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002046;2.38e-12;5!UBERON:0006955;1.55e-08;2!UBERON:0004801;1.55e-08;2!UBERON:0006562;2.40e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.38e-12,5;UBERON:0004117,2.38e-12,5;UBERON:0007689,2.38e-12,5;UBERON:0007123,2.38e-12,5;UBERON:0003091,2.38e-12,5;UBERON:0006955,1.39e-08,2;UBERON:0004801,1.39e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,1.84820002233648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,1.66963057534359,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0.344743373241465,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,1.94224303627274,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,2.87295381715328,0,0,0.387025325156341,0,0.328461828212837,0,0,0,0.137041924646751,0.596143835108969,0,0,0.0801588202515337,0,0.19980960958213,0,0.114536596165916,0.686379991447858,0,0,0,0.543616824294456,1.67364554099733,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.169346664131569,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,1.24513771442608,0.124980407962107,3.1846314683746,0,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0.363697318405119,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0,0.463044948647668,0.489473409012935,0,0,0.438568099157414,0.176689145945881,0,0.337884881306145,0,0.345430341731199,0,0,0,0,0,3.60370833731054,1.2288645437686,0,0,0,0.172214979660816,2.83757976783418,0,0,0,0,0.107824811396682,0.943595651135378,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0.231051332300676,0,0,0,0,0,0,0,0.818859587550484,0.295712172434091,0,0,0,0,0,0,0,0,1.02209942111676,0,0,0,0,0,0.115233987555779,0,0,0,0,0.556157009460346,0,0,0.280272163313789,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:98493062..98493066,- | |||
|id=chr1:98493062..98493066,- | |||
|ontology_enrichment_celltype=CL:0000076!4.00e-08!62;CL:0000077!9.30e-08!19;CL:0000174!4.45e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000319;2.21e-15;1!CL:0002535;1.55e-08;2!CL:0000159;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.17e-15,1;CL:0002535,1.39e-08,2;CL:0000159,2.87e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.38e-12;5 | |||
|ontology_enrichment_disease=DOID:162!1.11e-30!235;DOID:14566!1.18e-29!239;DOID:0050687!8.00e-20!143;DOID:305!1.50e-16!106;DOID:1749!1.13e-14!14;DOID:0050686!2.43e-11!137;DOID:3119!1.24e-08!14;DOID:4556!8.74e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:3030;2.21e-15;1!DOID:1749;8.57e-10;14!DOID:154;1.25e-08;2!DOID:4236;1.25e-08;2!DOID:1909;1.25e-08;2!DOID:4231;1.55e-08;2!DOID:1907;1.55e-08;2!DOID:4074;2.40e-08;2!DOID:4905;2.40e-08;2!DOID:3498;2.40e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.17e-15,1;DOID:1749,8.70e-10,14;DOID:0050687,6.60e-09,143;DOID:162,7.75e-09,235;DOID:154,1.20e-08,2;DOID:4236,1.20e-08,2;DOID:14566,1.27e-08,239;DOID:1909,1.29e-08,2;DOID:4231,1.50e-08,2;DOID:1907,1.50e-08,2;DOID:4074,1.86e-08,2;DOID:4905,1.86e-08,2;DOID:3498,1.86e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.38e-12;5!UBERON:0006955;1.55e-08;2!UBERON:0004801;1.55e-08;2!UBERON:0006562;2.40e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.38e-12,5;UBERON:0004117,2.38e-12,5;UBERON:0007689,2.38e-12,5;UBERON:0007123,2.38e-12,5;UBERON:0003091,2.38e-12,5;UBERON:0006955,1.39e-08,2;UBERON:0004801,1.39e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,1.84820002233648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,1.66963057534359,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0.344743373241465,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,1.94224303627274,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,2.87295381715328,0,0,0.387025325156341,0,0.328461828212837,0,0,0,0.137041924646751,0.596143835108969,0,0,0.0801588202515337,0,0.19980960958213,0,0.114536596165916,0.686379991447858,0,0,0,0.543616824294456,1.67364554099733,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.169346664131569,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,1.24513771442608,0.124980407962107,3.1846314683746,0,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0.363697318405119,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0,0.463044948647668,0.489473409012935,0,0,0.438568099157414,0.176689145945881,0,0.337884881306145,0,0.345430341731199,0,0,0,0,0,3.60370833731054,1.2288645437686,0,0,0,0.172214979660816,2.83757976783418,0,0,0,0,0.107824811396682,0.943595651135378,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0.231051332300676,0,0,0,0,0,0,0,0.818859587550484,0.295712172434091,0,0,0,0,0,0,0,0,1.02209942111676,0,0,0,0,0,0.115233987555779,0,0,0,0,0.556157009460346,0,0,0.280272163313789,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57903283935411,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:98493062..98493066,- | |||
}} |
Revision as of 07:23, 12 September 2013
Short description: | p@chr1:98493062..98493066, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:98493062..98493066, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.17e-15 | 1 |
epithelial cell of cervix | 1.39e-08 | 2 |
seromucus secreting cell | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.38e-12 | 5 |
pharyngeal pouch | 2.38e-12 | 5 |
thyroid diverticulum | 2.38e-12 | 5 |
pharyngeal pouch 2 | 2.38e-12 | 5 |
thyroid primordium | 2.38e-12 | 5 |
uterine epithelium | 1.39e-08 | 2 |
cervix epithelium | 1.39e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.17e-15 | 1 |
squamous cell carcinoma | 8.70e-10 | 14 |
cell type cancer | 6.60e-09 | 143 |
cancer | 7.75e-09 | 235 |
mixed cell type cancer | 1.20e-08 | 2 |
carcinosarcoma | 1.20e-08 | 2 |
disease of cellular proliferation | 1.27e-08 | 239 |
melanoma | 1.29e-08 | 2 |
histiocytoma | 1.50e-08 | 2 |
malignant fibroxanthoma | 1.50e-08 | 2 |
pancreas adenocarcinoma | 1.86e-08 | 2 |
pancreatic carcinoma | 1.86e-08 | 2 |
pancreatic ductal adenocarcinoma | 1.86e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.