FFCP PHASE1:Hg19::chr22:30639183..30639188,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr22:30639183..30639188,-|id=chr22:30639183..30639188,-|ontology_enrichment_celltype=CL:0000359!1.68e-09!32;CL:0000192!3.41e-07!42;CL:0000514!3.41e-07!42|ontology_enrichment_celltype_v019=CL:0002593;5.59e-26;2!CL:0002595;2.87e-23;5!CL:0000064;2.29e-17;3!CL:0000067;2.29e-17;3!CL:0005012;2.29e-17;3!CL:0002304;2.29e-17;3!CL:0002379;3.08e-14;1!CL:0000569;1.67e-13;4!CL:0002596;1.23e-07;2|ontology_enrichment_celltype_v019_2=CL:0002593,4.08e-26,2;CL:0002595,2.21e-23,5;CL:0000064,1.94e-17,3;CL:0000067,1.94e-17,3;CL:0005012,1.94e-17,3;CL:0002304,1.94e-17,3;CL:0002379,3.08e-14,1;CL:0000569,1.62e-13,4;CL:0000011,1.62e-13,4;CL:0002596,1.20e-07,2|ontology_enrichment_development_v019=CL:0000011;1.67e-13;4|ontology_enrichment_disease=DOID:2394!3.84e-15!14;DOID:120!8.05e-12!27;DOID:193!1.08e-10!29|ontology_enrichment_disease_v019=DOID:3620;3.08e-14;1!DOID:3565;3.08e-14;1!DOID:4468;1.81e-07;2|ontology_enrichment_disease_v019_2=DOID:3620,3.08e-14,1;DOID:3565,3.08e-14,1;DOID:4468,1.54e-07,2|ontology_enrichment_uberon=UBERON:0000992!3.68e-09!13;UBERON:0002118!9.09e-09!5;UBERON:0004532!9.09e-09!5;UBERON:0005256!6.83e-08!143;UBERON:0003914!1.33e-07!118;UBERON:0001637!1.91e-07!42;UBERON:0003509!1.91e-07!42;UBERON:0004572!1.91e-07!42|ontology_enrichment_uberon_v019=UBERON:0002456;5.59e-26;2!UBERON:0003834;2.87e-23;5!UBERON:0001533;2.87e-23;5!UBERON:0001778;2.29e-17;3!UBERON:0001775;2.29e-17;3!UBERON:0003513;8.15e-17;7!UBERON:0000488;2.84e-13;4!UBERON:0002203;3.71e-09;6!UBERON:0001768;3.71e-09;6!UBERON:0002200;3.71e-09;6!UBERON:0004573;2.11e-08;33!UBERON:0004571;2.11e-08;33!UBERON:0005396;1.23e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002456,4.08e-26,2;UBERON:0003834,2.21e-23,5;UBERON:0001533,2.21e-23,5;UBERON:0001778,1.94e-17,3;UBERON:0001775,1.94e-17,3;UBERON:0003513,6.76e-17,7;UBERON:0000488,2.51e-13,4;UBERON:0004573,1.85e-09,33;UBERON:0004571,1.85e-09,33;UBERON:0002203,3.42e-09,6;UBERON:0001768,3.42e-09,6;UBERON:0002200,3.42e-09,6;UBERON:0004535,2.97e-08,109;UBERON:0001009,5.28e-08,112;UBERON:0005396,1.20e-07,2;UBERON:0001637,2.07e-07,42;UBERON:0003509,2.07e-07,42;UBERON:0004572,2.07e-07,42;UBERON:0002049,2.97e-07,78;UBERON:0007798,2.97e-07,78;UBERON:0004872,8.29e-07,83|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0.384273959177026,0.260118695119756,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,1.99556457716308,1.31752178539689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,1.06400514659507,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,1.47798971368783,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0,2.07701771673448,0.232420756919918,0,0.601519410909855,0,0.114814448164607,0.728364672026868,0.262248829918848,0.451199612907412,0.385076685522074,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0,0,2.35484592059769,0,0,0,0,0,0.842516912477962,0,1.94970791705028,3.16950440270266,0,0.424216295861138,0,0,0.66343897524122,3.5076070820301,0,0,0.202910376962704,0.92947049429925,0,0,0.0982490410131212,0.35667105148125,0,0.422215270595328,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68798451622422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0.174118413160805,0,0,0,0,0.164230914106418,0,0.0882561266915003,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr22:30639183..30639188,- | |||
|id=chr22:30639183..30639188,- | |||
|ontology_enrichment_celltype=CL:0000359!1.68e-09!32;CL:0000192!3.41e-07!42;CL:0000514!3.41e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002593;5.59e-26;2!CL:0002595;2.87e-23;5!CL:0000064;2.29e-17;3!CL:0000067;2.29e-17;3!CL:0005012;2.29e-17;3!CL:0002304;2.29e-17;3!CL:0002379;3.08e-14;1!CL:0000569;1.67e-13;4!CL:0002596;1.23e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,4.08e-26,2;CL:0002595,2.21e-23,5;CL:0000064,1.94e-17,3;CL:0000067,1.94e-17,3;CL:0005012,1.94e-17,3;CL:0002304,1.94e-17,3;CL:0002379,3.08e-14,1;CL:0000569,1.62e-13,4;CL:0000011,1.62e-13,4;CL:0002596,1.20e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000011;1.67e-13;4 | |||
|ontology_enrichment_disease=DOID:2394!3.84e-15!14;DOID:120!8.05e-12!27;DOID:193!1.08e-10!29 | |||
|ontology_enrichment_disease_v019=DOID:3620;3.08e-14;1!DOID:3565;3.08e-14;1!DOID:4468;1.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.08e-14,1;DOID:3565,3.08e-14,1;DOID:4468,1.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000992!3.68e-09!13;UBERON:0002118!9.09e-09!5;UBERON:0004532!9.09e-09!5;UBERON:0005256!6.83e-08!143;UBERON:0003914!1.33e-07!118;UBERON:0001637!1.91e-07!42;UBERON:0003509!1.91e-07!42;UBERON:0004572!1.91e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;5.59e-26;2!UBERON:0003834;2.87e-23;5!UBERON:0001533;2.87e-23;5!UBERON:0001778;2.29e-17;3!UBERON:0001775;2.29e-17;3!UBERON:0003513;8.15e-17;7!UBERON:0000488;2.84e-13;4!UBERON:0002203;3.71e-09;6!UBERON:0001768;3.71e-09;6!UBERON:0002200;3.71e-09;6!UBERON:0004573;2.11e-08;33!UBERON:0004571;2.11e-08;33!UBERON:0005396;1.23e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,4.08e-26,2;UBERON:0003834,2.21e-23,5;UBERON:0001533,2.21e-23,5;UBERON:0001778,1.94e-17,3;UBERON:0001775,1.94e-17,3;UBERON:0003513,6.76e-17,7;UBERON:0000488,2.51e-13,4;UBERON:0004573,1.85e-09,33;UBERON:0004571,1.85e-09,33;UBERON:0002203,3.42e-09,6;UBERON:0001768,3.42e-09,6;UBERON:0002200,3.42e-09,6;UBERON:0004535,2.97e-08,109;UBERON:0001009,5.28e-08,112;UBERON:0005396,1.20e-07,2;UBERON:0001637,2.07e-07,42;UBERON:0003509,2.07e-07,42;UBERON:0004572,2.07e-07,42;UBERON:0002049,2.97e-07,78;UBERON:0007798,2.97e-07,78;UBERON:0004872,8.29e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0.384273959177026,0.260118695119756,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,1.99556457716308,1.31752178539689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,1.06400514659507,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,1.47798971368783,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0,2.07701771673448,0.232420756919918,0,0.601519410909855,0,0.114814448164607,0.728364672026868,0.262248829918848,0.451199612907412,0.385076685522074,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0,0,2.35484592059769,0,0,0,0,0,0.842516912477962,0,1.94970791705028,3.16950440270266,0,0.424216295861138,0,0,0.66343897524122,3.5076070820301,0,0,0.202910376962704,0.92947049429925,0,0,0.0982490410131212,0.35667105148125,0,0.422215270595328,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68798451622422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0.174118413160805,0,0,0,0,0.164230914106418,0,0.0882561266915003,0,0,0.19871461170299,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0.714695326373367,0,0,0,0.864221491201268,0.326587360109409,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70531639396343,0,0,0,0.233713309847224,0,1.51522404220071,0.251567901752575,0,0.457680136793847,0,1.5543720058278,3.25281329977195,0.796483835818512,0.899606224327209,0.465788870628778,0,0.53168342911599,0,0.601030435988874,0.380805212168795,0.406870733204662,0.727394636810238,0.859284456339908,0.928067519756987,0.398095888698616,1.20008329398946,0,0,0,0,0,0.521988583930423,0,0,0.489473409012935,0,0.308801447160972,0.219284049578707,0,0.964570191354574,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.68732060563215,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr22:30639183..30639188,- | |||
}} |
Revision as of 11:25, 12 September 2013
Short description: | p@chr22:30639183..30639188, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:30639183..30639188, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 4.08e-26 | 2 |
smooth muscle cell of the subclavian artery | 2.21e-23 | 5 |
ciliated cell | 1.94e-17 | 3 |
ciliated epithelial cell | 1.94e-17 | 3 |
multi-ciliated epithelial cell | 1.94e-17 | 3 |
non-pigmented ciliary epithelial cell | 1.94e-17 | 3 |
meningothelial cell | 3.08e-14 | 1 |
cardiac mesenchymal cell | 1.62e-13 | 4 |
migratory trunk neural crest cell | 1.62e-13 | 4 |
smooth muscle cell of the carotid artery | 1.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 4.08e-26 | 2 |
thoracic segment blood vessel | 2.21e-23 | 5 |
subclavian artery | 2.21e-23 | 5 |
ciliary epithelium | 1.94e-17 | 3 |
ciliary body | 1.94e-17 | 3 |
trunk blood vessel | 6.76e-17 | 7 |
atypical epithelium | 2.51e-13 | 4 |
systemic artery | 1.85e-09 | 33 |
systemic arterial system | 1.85e-09 | 33 |
vasculature of eye | 3.42e-09 | 6 |
uvea | 3.42e-09 | 6 |
vasculature of head | 3.42e-09 | 6 |
cardiovascular system | 2.97e-08 | 109 |
circulatory system | 5.28e-08 | 112 |
carotid artery segment | 1.20e-07 | 2 |
artery | 2.07e-07 | 42 |
arterial blood vessel | 2.07e-07 | 42 |
arterial system | 2.07e-07 | 42 |
vasculature | 2.97e-07 | 78 |
vascular system | 2.97e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 8.29e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.08e-14 | 1 |
meningioma | 3.08e-14 | 1 |
clear cell adenocarcinoma | 1.54e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.