FFCP PHASE1:Mm9::chr10:128003060..128003075,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18813|HGNC=|MCL_coexpression_id=2535|UniProt=P50580,Q3TGU7|association_with_transcript=-70bp_to_ENSMUST00000026425,NM_011119,uc007hnl.1_5end|description=CAGE_peak_2_at_Pa2g4_5end|id=chr10:128003060..128003075,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!1.15e-11!51;UBERON:0002405!8.28e-10!70;UBERON:0004177!2.40e-08!29;UBERON:0001041!4.01e-08!92;UBERON:0000077!9.19e-08!97;UBERON:0003929!1.76e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.20e-08,80;UBERON:0004177,2.40e-08,29;UBERON:0005057,2.40e-08,29;UBERON:0003929,1.76e-07,55;UBERON:0000077,8.61e-07,35|phase1_expression=9.76907967339243,7.32848356042658,6.3699893514535,7.56160528267075,5.00895729946347,17.7952028226603,21.2587502941928,15.8821687833139,80.8127265150567,82.6247777916637,128.584694137354,136.569936200016,12.1552518251156,16.9595580692855,30.3129883252253,38.0653502692873,29.3815988813822,19.7163853348899,21.526966076101,18.2487550273153,15.6479653877968,29.1915396530603,23.7691808116431,17.9191513528615,13.0763290208287,13.2073351746455,13.7843838770904,15.2984575206981,13.8717096203153,13.6096270070363,17.2949798311138,38.1018404075779,31.9833689543976,47.5445043046316,24.2635360591071,28.2598897109437,25.3170001765338,5.4409111995798,8.5946887897618,5.75876118371178,1.76469446409304,4.78131839470912,3.88408282424923,17.2478640626541,12.0638548151222,16.3356609423897,5.47673941043627,11.1192829754028,11.643367684927,7.19390626574849,13.2987100544094,21.5628846547457,21.8117387875057,10.1550699881588,24.5348473373999,12.6057123657614,4.58453503902011,5.15672092277442,9.1042407386819,8.46385566835253,8.23980824558033,13.8926258148344,10.6715375533337,7.64914759689189,8.89979726310277,4.9733608046227,5.39280198933128,5.76327457982332,12.7538223139428,11.2054928815303,13.4607975264884,11.4260393761521,7.06779331045163,11.7591167246356,12.9391385874619,11.9498442259303,14.3150645299205,9.70423769447427,9.06278546211836,9.23204014111357,9.97215315266265,9.89735404057844,8.09630697104005,6.19038871034848,8.55670187550137,8.2496003932627,8.25755748634797,10.6247684120421,36.5757513799279,25.6943304363071,11.0148505706638,12.0459342777394,27.8788246820178,19.4293148989614,12.9955283489534,16.5769948226014,20.6453297593675,18.9177658061644,13.768658243952,14.8402621294343,11.6900038414645,7.69958864485907,7.64415719119937,7.11066703153331,13.4224445426953,15.7083116594561,10.6160133453104,13.4736978068491,30.5546702703663,10.3909497345377,25.502343034622,18.5723941770406,15.681853813412,10.2491395575783,9.8774513993992,9.92766071504436,7.41584903203122,20.5331086826275,23.8844849026466,16.5002186946357,21.863310327579,22.7891368973554,20.5030937339934,9.66176630138106,8.58731497935166,15.8383374229327,46.1288229347793,31.1949420116572,46.6347733358147,11.6836698735762,10.0650132620098,10.8062742817063,9.56033761057521,10.4843337505436,10.1816141834184,10.3834408363365,10.6931332042832,18.4122316502938,10.3616330957807,10.5220927943237,17.566259799965,16.0931473103431,15.3052810334547,13.8648432408858,11.838350852331,13.7081680704789,12.1812241927647,10.8655415710387,29.3172470388665,21.936305299467,14.7798944297717,21.2619860454748,13.3462679628287,28.5566776548177,33.5424882344948,13.5343301436575,57.5814813596853,36.2860549031748,48.0236313978552,24.2337153866537,19.465662978431,11.884096056427,13.9679393995274,13.3799677588235,11.7243005794407,11.39416329277,14.7550370769791,11.3262382096154,11.8483091937706,9.85004784474571,12.0792526223325,12.7193989060039,13.8316572633362,10.7365135008297,10.7247873767705,16.6705472054441,7.59963200862735,24.8583532663732,18.3427895460301,16.0243303583703,23.453877960621,15.5296313959974,14.2321948060717,12.935342575654,14.7104009078799,12.5171205590248,8.04272668160862,12.3353012665514,11.8928093142663,16.178749355776,14.4812493416045,12.7450414882795,23.139483916276,16.6802828410204,19.1603150644237,15.2738495883986,9.69762435838129,9.95928642442524,9.54871710576285,9.59465961867414,7.22194148070324,10.488758933353,24.0126627940591,52.2225180891374,54.250282651244,47.8956299379738,44.0206463413051,33.0412708860811,23.1709525121092,25.3172600956713,20.2669033468794,22.7885972946108,31.629005436018,14.8856379067401,14.3537329632698,13.639259409144,21.7070870361514,22.1924019827149,15.3345147838282,22.5494780006877,21.6743418667894,18.3324692637203,15.9589368836181,10.887906733718,9.28370199455454,8.58588050574315,9.77337893458384,10.6303051031412,6.69710028361446,10.4872521418072,10.1884139300878,11.5719246865209,4.52373851817817,4.35124547054968,22.6211565588757,18.4877620024171,12.0412942490844,11.0178985396671,27.0492659871514,14.1383719234449,19.5615096038079,23.0358859135017,15.2950612390287,18.4005974423465,19.3834846451683,11.6061377623421,16.1924280669958,15.4895604692995,15.0209355619679,10.9249247583414,18.0263908214501,12.4645922567079,12.86806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| ||
|EntrezGene=18813 | |||
|HGNC= | |||
|MCL_coexpression_id=2535 | |||
|UniProt=P50580,Q3TGU7 | |||
|association_with_transcript=-70bp_to_ENSMUST00000026425,NM_011119,uc007hnl.1_5end | |||
|description=CAGE_peak_2_at_Pa2g4_5end | |||
|id=chr10:128003060..128003075,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.15e-11!51;UBERON:0002405!8.28e-10!70;UBERON:0004177!2.40e-08!29;UBERON:0001041!4.01e-08!92;UBERON:0000077!9.19e-08!97;UBERON:0003929!1.76e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.20e-08,80;UBERON:0004177,2.40e-08,29;UBERON:0005057,2.40e-08,29;UBERON:0003929,1.76e-07,55;UBERON:0000077,8.61e-07,35 | |||
|phase1_expression=9.76907967339243,7.32848356042658,6.3699893514535,7.56160528267075,5.00895729946347,17.7952028226603,21.2587502941928,15.8821687833139,80.8127265150567,82.6247777916637,128.584694137354,136.569936200016,12.1552518251156,16.9595580692855,30.3129883252253,38.0653502692873,29.3815988813822,19.7163853348899,21.526966076101,18.2487550273153,15.6479653877968,29.1915396530603,23.7691808116431,17.9191513528615,13.0763290208287,13.2073351746455,13.7843838770904,15.2984575206981,13.8717096203153,13.6096270070363,17.2949798311138,38.1018404075779,31.9833689543976,47.5445043046316,24.2635360591071,28.2598897109437,25.3170001765338,5.4409111995798,8.5946887897618,5.75876118371178,1.76469446409304,4.78131839470912,3.88408282424923,17.2478640626541,12.0638548151222,16.3356609423897,5.47673941043627,11.1192829754028,11.643367684927,7.19390626574849,13.2987100544094,21.5628846547457,21.8117387875057,10.1550699881588,24.5348473373999,12.6057123657614,4.58453503902011,5.15672092277442,9.1042407386819,8.46385566835253,8.23980824558033,13.8926258148344,10.6715375533337,7.64914759689189,8.89979726310277,4.9733608046227,5.39280198933128,5.76327457982332,12.7538223139428,11.2054928815303,13.4607975264884,11.4260393761521,7.06779331045163,11.7591167246356,12.9391385874619,11.9498442259303,14.3150645299205,9.70423769447427,9.06278546211836,9.23204014111357,9.97215315266265,9.89735404057844,8.09630697104005,6.19038871034848,8.55670187550137,8.2496003932627,8.25755748634797,10.6247684120421,36.5757513799279,25.6943304363071,11.0148505706638,12.0459342777394,27.8788246820178,19.4293148989614,12.9955283489534,16.5769948226014,20.6453297593675,18.9177658061644,13.768658243952,14.8402621294343,11.6900038414645,7.69958864485907,7.64415719119937,7.11066703153331,13.4224445426953,15.7083116594561,10.6160133453104,13.4736978068491,30.5546702703663,10.3909497345377,25.502343034622,18.5723941770406,15.681853813412,10.2491395575783,9.8774513993992,9.92766071504436,7.41584903203122,20.5331086826275,23.8844849026466,16.5002186946357,21.863310327579,22.7891368973554,20.5030937339934,9.66176630138106,8.58731497935166,15.8383374229327,46.1288229347793,31.1949420116572,46.6347733358147,11.6836698735762,10.0650132620098,10.8062742817063,9.56033761057521,10.4843337505436,10.1816141834184,10.3834408363365,10.6931332042832,18.4122316502938,10.3616330957807,10.5220927943237,17.566259799965,16.0931473103431,15.3052810334547,13.8648432408858,11.838350852331,13.7081680704789,12.1812241927647,10.8655415710387,29.3172470388665,21.936305299467,14.7798944297717,21.2619860454748,13.3462679628287,28.5566776548177,33.5424882344948,13.5343301436575,57.5814813596853,36.2860549031748,48.0236313978552,24.2337153866537,19.465662978431,11.884096056427,13.9679393995274,13.3799677588235,11.7243005794407,11.39416329277,14.7550370769791,11.3262382096154,11.8483091937706,9.85004784474571,12.0792526223325,12.7193989060039,13.8316572633362,10.7365135008297,10.7247873767705,16.6705472054441,7.59963200862735,24.8583532663732,18.3427895460301,16.0243303583703,23.453877960621,15.5296313959974,14.2321948060717,12.935342575654,14.7104009078799,12.5171205590248,8.04272668160862,12.3353012665514,11.8928093142663,16.178749355776,14.4812493416045,12.7450414882795,23.139483916276,16.6802828410204,19.1603150644237,15.2738495883986,9.69762435838129,9.95928642442524,9.54871710576285,9.59465961867414,7.22194148070324,10.488758933353,24.0126627940591,52.2225180891374,54.250282651244,47.8956299379738,44.0206463413051,33.0412708860811,23.1709525121092,25.3172600956713,20.2669033468794,22.7885972946108,31.629005436018,14.8856379067401,14.3537329632698,13.639259409144,21.7070870361514,22.1924019827149,15.3345147838282,22.5494780006877,21.6743418667894,18.3324692637203,15.9589368836181,10.887906733718,9.28370199455454,8.58588050574315,9.77337893458384,10.6303051031412,6.69710028361446,10.4872521418072,10.1884139300878,11.5719246865209,4.52373851817817,4.35124547054968,22.6211565588757,18.4877620024171,12.0412942490844,11.0178985396671,27.0492659871514,14.1383719234449,19.5615096038079,23.0358859135017,15.2950612390287,18.4005974423465,19.3834846451683,11.6061377623421,16.1924280669958,15.4895604692995,15.0209355619679,10.9249247583414,18.0263908214501,12.4645922567079,12.8680697889325,10.8880281161873,10.619611067197,20.3935734370184,25.9998258989686,21.6895841719283,20.3758306087733,14.1420168054207,12.4045580720746,8.36127577798263,13.9033977570041,18.6461687182131,14.7586052004998,11.3449097573006,8.85142974959849,13.8647042404109,11.9009989080134,7.93047029616891,10.995094485821,13.7343989553594,9.3792941743209,11.8741330154694,21.5897971418614,7.83778662196135,13.4522322813527,32.647478082413,31.0011699256139,25.5726801695381,33.5436286648813,47.4367200263227,13.4081184849731,17.6154036909984,33.4906926363791,19.6067524565061,32.5942368170693,36.7318491159147,42.7852932766809,30.198718863261,33.9956859987711,37.7868921273877,34.9645933725192,25.7761066864081,28.6284074190927,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| |||
|short_description=p2@Pa2g4 | |||
}} | |||
Revision as of 16:10, 12 September 2013
| Short description: | p2@Pa2g4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Pa2g4_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2535 |
| Association with transcript: | -70bp_to_ENSMUST00000026425, NM_011119, uc007hnl.1_5end |
| EntrezGene: | Pa2g4 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| foregut | 1.20e-08 | 80 |
| hemopoietic organ | 2.40e-08 | 29 |
| immune organ | 2.40e-08 | 29 |
| gut epithelium | 1.76e-07 | 55 |
| mixed endoderm/mesoderm-derived structure | 8.61e-07 | 35 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
