FFCP PHASE1:Mm9::chr10:77512581..77512592,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54427|HGNC=|MCL_coexpression_id=339|UniProt=Q9CWR8,A3EWM2|association_with_transcript=0bp_to_ENSMUST00000000746,NM_019448,uc007fxf.1_5end|description=CAGE_peak_3_at_Dnmt3l_5end|id=chr10:77512581..77512592,+|ontology_enrichment_celltype=CL:0000349!1.49e-19!3;CL:0000351!1.49e-19!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!1.49e-19!3;UBERON:0000307!1.49e-19!3;UBERON:0001987!1.27e-13!2;UBERON:0003124!1.27e-13!2;UBERON:0004340!1.27e-13!2;UBERON:0003133!1.32e-12!24;UBERON:0005156!1.36e-11!26;UBERON:0000990!1.36e-11!26;UBERON:0000473!1.53e-11!14;UBERON:0003135!9.10e-11!15;UBERON:0003101!4.33e-10!16;UBERON:0000079!4.33e-10!16;UBERON:0004176!1.72e-09!17;UBERON:0009196!1.72e-09!17;UBERON:0009117!1.72e-09!17;UBERON:0005631!2.17e-09!3;UBERON:0000478!2.17e-09!3;UBERON:0000158!2.17e-09!3;UBERON:0000991!5.85e-09!18;UBERON:0005564!5.85e-09!18;UBERON:0005795!2.96e-07!4;UBERON:0000995!2.96e-07!4;UBERON:0004175!9.07e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.02e-17,14;UBERON:0003135,3.86e-16,15;UBERON:0003133,1.32e-15,24;UBERON:0003101,3.59e-15,16;UBERON:0000079,3.59e-15,16;UBERON:0005156,1.92e-14,26;UBERON:0000990,1.92e-14,26;UBERON:0004176,2.57e-14,17;UBERON:0009196,2.57e-14,17;UBERON:0009117,2.57e-14,17;UBERON:0000991,1.49e-13,18;UBERON:0005564,1.49e-13,18;UBERON:0001987,1.81e-08,2;UBERON:0003124,1.81e-08,2;UBERON:0004340,1.81e-08,2;UBERON:0002323,7.41e-07,37;UBERON:0004458,7.41e-07,37|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.27099242518292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61134040369762,7.23295011475294,1.68956125490778,1.17357238645754,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,1.55390167361845,0.358855426437903,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Dnmt3l}} | ||
|EntrezGene=54427 | |||
|HGNC= | |||
|MCL_coexpression_id=339 | |||
|UniProt=Q9CWR8,A3EWM2 | |||
|association_with_transcript=0bp_to_ENSMUST00000000746,NM_019448,uc007fxf.1_5end | |||
|description=CAGE_peak_3_at_Dnmt3l_5end | |||
|id=chr10:77512581..77512592,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.49e-19!3;CL:0000351!1.49e-19!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!1.49e-19!3;UBERON:0000307!1.49e-19!3;UBERON:0001987!1.27e-13!2;UBERON:0003124!1.27e-13!2;UBERON:0004340!1.27e-13!2;UBERON:0003133!1.32e-12!24;UBERON:0005156!1.36e-11!26;UBERON:0000990!1.36e-11!26;UBERON:0000473!1.53e-11!14;UBERON:0003135!9.10e-11!15;UBERON:0003101!4.33e-10!16;UBERON:0000079!4.33e-10!16;UBERON:0004176!1.72e-09!17;UBERON:0009196!1.72e-09!17;UBERON:0009117!1.72e-09!17;UBERON:0005631!2.17e-09!3;UBERON:0000478!2.17e-09!3;UBERON:0000158!2.17e-09!3;UBERON:0000991!5.85e-09!18;UBERON:0005564!5.85e-09!18;UBERON:0005795!2.96e-07!4;UBERON:0000995!2.96e-07!4;UBERON:0004175!9.07e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.02e-17,14;UBERON:0003135,3.86e-16,15;UBERON:0003133,1.32e-15,24;UBERON:0003101,3.59e-15,16;UBERON:0000079,3.59e-15,16;UBERON:0005156,1.92e-14,26;UBERON:0000990,1.92e-14,26;UBERON:0004176,2.57e-14,17;UBERON:0009196,2.57e-14,17;UBERON:0009117,2.57e-14,17;UBERON:0000991,1.49e-13,18;UBERON:0005564,1.49e-13,18;UBERON:0001987,1.81e-08,2;UBERON:0003124,1.81e-08,2;UBERON:0004340,1.81e-08,2;UBERON:0002323,7.41e-07,37;UBERON:0004458,7.41e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.27099242518292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61134040369762,7.23295011475294,1.68956125490778,1.17357238645754,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,1.55390167361845,0.358855426437903,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Dnmt3l | |||
}} |
Revision as of 17:28, 12 September 2013
Short description: | p3@Dnmt3l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dnmt3l_5end |
Coexpression cluster: | MCL_coexpression_mm9:339 |
Association with transcript: | 0bp_to_ENSMUST00000000746, NM_019448, uc007fxf.1_5end |
EntrezGene: | Dnmt3l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 3.02e-17 | 14 |
male reproductive organ | 3.86e-16 | 15 |
reproductive organ | 1.32e-15 | 24 |
male organism | 3.59e-15 | 16 |
male reproductive system | 3.59e-15 | 16 |
reproductive structure | 1.92e-14 | 26 |
reproductive system | 1.92e-14 | 26 |
external genitalia | 2.57e-14 | 17 |
indifferent external genitalia | 2.57e-14 | 17 |
indifferent gonad | 2.57e-14 | 17 |
gonad | 1.49e-13 | 18 |
gonad primordium | 1.49e-13 | 18 |
placenta | 1.81e-08 | 2 |
chorion | 1.81e-08 | 2 |
allantois | 1.81e-08 | 2 |
body cavity | 7.41e-07 | 37 |
body cavity or lining | 7.41e-07 | 37 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.