UBERON:0000991
From FANTOM5_SSTAR
Name: | gonad | ||
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Namespace: | FANTOM | ||
Definition: | "Reproductive organ that produces and releases eggs (ovary) or sperm (testis)." [ISBN:0140512888, Wikipedia:Gonad, ZFA:0000413, ZFIN:curator] | ||
Xrefs: |
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Synonyms: | "gonada" EXACT [] | ||
Comments: | FMA xref is a 'general anatomical term' | ||
Alt_id: | UBERON:FBbt_00004858-FMA_18250-MA_0002420-WBbt_0005175-XAO_0003146-ZFA_0000413 | ||
Subset: |
major_organ organ_slim uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0003133(reproductive organ) |
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develops_from: | UBERON:0005564(gonad primordium) |
part_of: | UBERON:0000990(reproductive system) |
Children
is a: | UBERON:0000473 (testis),UBERON:0000992 (female gonad),UBERON:0009117 (indifferent gonad) |
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derives from: | FF:0011282 (mouse gonad- embryo E13 sample) |
part of: | UBERON:0004909 (epithelium of gonad) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10020-101D2 (ovary, adult, pool1)
- 10026-101D8 (testis, adult, pool1)
- 10096-102C6 (testis, adult, pool2)
- 10201-103F3 (seminal vesicle, adult)
- 10590-108D5 (testicular germ cell embryonal carcinoma cell line:NEC8)
- 10591-108D6 (testicular germ cell embryonal carcinoma cell line:NEC14)
- 10593-108D8 (testicular germ cell embryonal carcinoma cell line:NEC15)
- 10693-109F9 (serous cystadenocarcinoma cell line:HTOA)
- 10757-110E1
- 10780-110G6
... further results Mouse (Mus musculus)
- 10020-101D2 (ovary, adult, pool1)
- 10026-101D8 (testis, adult, pool1)
- 10096-102C6 (testis, adult, pool2)
- 10201-103F3 (seminal vesicle, adult)
- 10590-108D5 (testicular germ cell embryonal carcinoma cell line:NEC8)
- 10591-108D6 (testicular germ cell embryonal carcinoma cell line:NEC14)
- 10593-108D8 (testicular germ cell embryonal carcinoma cell line:NEC15)
- 10693-109F9 (serous cystadenocarcinoma cell line:HTOA)
- 10757-110E1
- 10780-110G6
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000991 (gonad), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure which produces gametes as well as certain sex hormones controlled by the pituitary gonadotropins.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "The part of the reproductive system that produces and releases eggs (ovary) or sperm (testis).[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.