FFCP PHASE1:Mm9::chr10:80753972..80754027,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27375|HGNC=|MCL_coexpression_id=12|UniProt=Q921G9,E9QL54|association_with_transcript=0bp_to_ENSMUST00000045744,ENSMUST00000092280,NM_013769,uc007gha.1_5end|description=CAGE_peak_1_at_Tjp3_5end|id=chr10:80753972..80754027,-|ontology_enrichment_celltype=CL:0000066!1.83e-08!25;CL:0002563!1.77e-07!9;CL:0002251!1.77e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,9.01e-10,25;CL:0002563,4.83e-08,9;CL:0002251,4.83e-08,9;CL:0000223,1.47e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.80e-27!128;UBERON:0001555!3.80e-27!128;UBERON:0007026!3.80e-27!128;UBERON:0004119!6.49e-27!130;UBERON:0000925!6.49e-27!130;UBERON:0006595!6.49e-27!130;UBERON:0004921!8.11e-26!126;UBERON:0004185!8.11e-26!126;UBERON:0005409!1.12e-21!59;UBERON:0000160!6.22e-21!43;UBERON:0000344!3.79e-11!15;UBERON:0000077!4.89e-10!97;UBERON:0001242!4.89e-10!13;UBERON:0000060!4.89e-10!13;UBERON:0001262!4.89e-10!13;UBERON:0004786!4.89e-10!13;UBERON:0001041!3.53e-09!92;UBERON:0000485!1.14e-07!11;UBERON:0003350!1.77e-07!9;UBERON:0004808!1.77e-07!9;UBERON:0001277!1.77e-07!9;UBERON:0002108!1.83e-07!16;UBERON:0004923!3.44e-07!24;UBERON:0000466!6.38e-07!79;UBERON:0005911!7.17e-07!69;UBERON:0003104!8.33e-07!131;UBERON:0009142!8.33e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.75e-20,116;UBERON:0001555,1.75e-20,116;UBERON:0007026,1.75e-20,116;UBERON:0004119,2.86e-20,118;UBERON:0000925,2.86e-20,118;UBERON:0006595,2.86e-20,118;UBERON:0004921,2.96e-19,114;UBERON:0000160,1.04e-17,31;UBERON:0005409,3.76e-16,47;UBERON:0000344,4.67e-12,15;UBERON:0001242,7.66e-11,13;UBERON:0001262,7.66e-11,13;UBERON:0004786,7.66e-11,13;UBERON:0000485,2.99e-08,11;UBERON:0003350,4.83e-08,9;UBERON:0004808,4.83e-08,9;UBERON:0001277,4.83e-08,9|phase1_expression=6.08565618998217,123.886269711973,113.294810607994,194.786952081599,156.780363473207,114.157904900085,129.888628171112,0,0,0.234064526321993,0,0,0.342401459862411,0.262261207256992,0.333109761815663,0.202475267389826,0.699561878128147,0.630924330716475,0.959801035240171,0,6.97354979238772,6.056748023254,0.783599367416806,89.7557491871011,63.0875522934718,87.2832585454831,68.0603953931338,94.1609286837335,140.807353817173,100.812051903972,77.6056787293567,0,0,0,119.006867337525,99.4083179243784,106.576403968957,7.11503772252743,3.906676722619,3.14114246384279,2.35292595212406,2.73218193983378,1.94204141212461,0,0.101376931219515,0,0,0,0.439372365468944,0.388859798148567,0,0,0.335565212115473,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0.571301968807607,0,0.122490799214954,0,0,0,0.255374676170375,0.614426133024974,0.527545150920775,0,0,0.558365998002762,0,0.763991238884051,0.294628585473668,1.13897344639282,0.372798891650601,0.151452386666368,0,15.3628179011889,18.0689014166091,2.03991400112325,59.9070542717977,50.6825605609182,19.2651561451854,12.9208866521212,0,0,0,12.5350643601246,0,0,0,28.360326372469,22.2956681618087,17.6933555755174,23.6360631018454,2.07150306917737,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0,1.38233250462643,6.17987419335935,0.289198713839823,0,0,0.220841518460394,0.484875253135222,124.882480016142,0.585561594023094,0.209446706813455,110.868361960529,0.11981512450592,0,0,0.599162557619291,0,0,0.173824320192276,0,0,0.162241263067758,1.2220723662038,6.46916247172484,37.1502454897502,73.0233239926065,0.260240885925407,0,0.180062129805349,1.35634336052144,0.680364991513279,0.768682321709099,0.937017245597288,20.1788629176432,0,0.189106080167819,0.351902248327898,0.43839146485515,1.39023624612799,2.43776516565517,3.2925141825271,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0.134206418760372,1.05144974282064,0.205809224758569,130.845838061584,91.7643466322499,0.213288250535234,0.464473343720877,11.7269389803105,21.176770085451,31.1329261382818,41.4691864925379,83.517114831834,41.5041365904507,44.9890023752482,45.1631191533412,49.9108063024948,89.8819408654222,90.3457048476222,102.557755725999,2.0863469104839,1.82797620175566,3.38123207019241,3.86937522906097,1.55161989734101,2.73529697572242,2.33975187359752,3.24742325555125,4.08196692387575,2.34454611451421,17.1942523710546,0.500535317148282,0.589676985339609,0.674586337154561,0.608580364165509,0.964708639009667,1.2731292589071,1.72617682470486,2.43202840162553,6.86403532970204,10.0637744569148,11.5363693777236,24.9630138491648,46.2219346643215,49.6930835455697,28.946611281802,6.09685527549795,0.189491411770485,3.7481944581666,3.90413697282933,9.85699042811709,8.87783164441623,13.0924002487308,7.80534591431195,5.51723004371669,2.43611158613652,3.98636921643718,5.73521601505083,6.73471429276993,9.9807850421243,0,0,28.0305635620851,48.5648673496329,0.80275294993896,0.234423373184406,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,5.53566332312248,2.31485284767432,2.28041743095006,13.857490329693,21.2392221343941,9.46844481004428,16.0231485191318,22.0667943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| ||
|EntrezGene=27375 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q921G9,E9QL54 | |||
|association_with_transcript=0bp_to_ENSMUST00000045744,ENSMUST00000092280,NM_013769,uc007gha.1_5end | |||
|description=CAGE_peak_1_at_Tjp3_5end | |||
|id=chr10:80753972..80754027,- | |||
|ontology_enrichment_celltype=CL:0000066!1.83e-08!25;CL:0002563!1.77e-07!9;CL:0002251!1.77e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.01e-10,25;CL:0002563,4.83e-08,9;CL:0002251,4.83e-08,9;CL:0000223,1.47e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.80e-27!128;UBERON:0001555!3.80e-27!128;UBERON:0007026!3.80e-27!128;UBERON:0004119!6.49e-27!130;UBERON:0000925!6.49e-27!130;UBERON:0006595!6.49e-27!130;UBERON:0004921!8.11e-26!126;UBERON:0004185!8.11e-26!126;UBERON:0005409!1.12e-21!59;UBERON:0000160!6.22e-21!43;UBERON:0000344!3.79e-11!15;UBERON:0000077!4.89e-10!97;UBERON:0001242!4.89e-10!13;UBERON:0000060!4.89e-10!13;UBERON:0001262!4.89e-10!13;UBERON:0004786!4.89e-10!13;UBERON:0001041!3.53e-09!92;UBERON:0000485!1.14e-07!11;UBERON:0003350!1.77e-07!9;UBERON:0004808!1.77e-07!9;UBERON:0001277!1.77e-07!9;UBERON:0002108!1.83e-07!16;UBERON:0004923!3.44e-07!24;UBERON:0000466!6.38e-07!79;UBERON:0005911!7.17e-07!69;UBERON:0003104!8.33e-07!131;UBERON:0009142!8.33e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.75e-20,116;UBERON:0001555,1.75e-20,116;UBERON:0007026,1.75e-20,116;UBERON:0004119,2.86e-20,118;UBERON:0000925,2.86e-20,118;UBERON:0006595,2.86e-20,118;UBERON:0004921,2.96e-19,114;UBERON:0000160,1.04e-17,31;UBERON:0005409,3.76e-16,47;UBERON:0000344,4.67e-12,15;UBERON:0001242,7.66e-11,13;UBERON:0001262,7.66e-11,13;UBERON:0004786,7.66e-11,13;UBERON:0000485,2.99e-08,11;UBERON:0003350,4.83e-08,9;UBERON:0004808,4.83e-08,9;UBERON:0001277,4.83e-08,9 | |||
|phase1_expression=6.08565618998217,123.886269711973,113.294810607994,194.786952081599,156.780363473207,114.157904900085,129.888628171112,0,0,0.234064526321993,0,0,0.342401459862411,0.262261207256992,0.333109761815663,0.202475267389826,0.699561878128147,0.630924330716475,0.959801035240171,0,6.97354979238772,6.056748023254,0.783599367416806,89.7557491871011,63.0875522934718,87.2832585454831,68.0603953931338,94.1609286837335,140.807353817173,100.812051903972,77.6056787293567,0,0,0,119.006867337525,99.4083179243784,106.576403968957,7.11503772252743,3.906676722619,3.14114246384279,2.35292595212406,2.73218193983378,1.94204141212461,0,0.101376931219515,0,0,0,0.439372365468944,0.388859798148567,0,0,0.335565212115473,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0.571301968807607,0,0.122490799214954,0,0,0,0.255374676170375,0.614426133024974,0.527545150920775,0,0,0.558365998002762,0,0.763991238884051,0.294628585473668,1.13897344639282,0.372798891650601,0.151452386666368,0,15.3628179011889,18.0689014166091,2.03991400112325,59.9070542717977,50.6825605609182,19.2651561451854,12.9208866521212,0,0,0,12.5350643601246,0,0,0,28.360326372469,22.2956681618087,17.6933555755174,23.6360631018454,2.07150306917737,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0,1.38233250462643,6.17987419335935,0.289198713839823,0,0,0.220841518460394,0.484875253135222,124.882480016142,0.585561594023094,0.209446706813455,110.868361960529,0.11981512450592,0,0,0.599162557619291,0,0,0.173824320192276,0,0,0.162241263067758,1.2220723662038,6.46916247172484,37.1502454897502,73.0233239926065,0.260240885925407,0,0.180062129805349,1.35634336052144,0.680364991513279,0.768682321709099,0.937017245597288,20.1788629176432,0,0.189106080167819,0.351902248327898,0.43839146485515,1.39023624612799,2.43776516565517,3.2925141825271,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0.134206418760372,1.05144974282064,0.205809224758569,130.845838061584,91.7643466322499,0.213288250535234,0.464473343720877,11.7269389803105,21.176770085451,31.1329261382818,41.4691864925379,83.517114831834,41.5041365904507,44.9890023752482,45.1631191533412,49.9108063024948,89.8819408654222,90.3457048476222,102.557755725999,2.0863469104839,1.82797620175566,3.38123207019241,3.86937522906097,1.55161989734101,2.73529697572242,2.33975187359752,3.24742325555125,4.08196692387575,2.34454611451421,17.1942523710546,0.500535317148282,0.589676985339609,0.674586337154561,0.608580364165509,0.964708639009667,1.2731292589071,1.72617682470486,2.43202840162553,6.86403532970204,10.0637744569148,11.5363693777236,24.9630138491648,46.2219346643215,49.6930835455697,28.946611281802,6.09685527549795,0.189491411770485,3.7481944581666,3.90413697282933,9.85699042811709,8.87783164441623,13.0924002487308,7.80534591431195,5.51723004371669,2.43611158613652,3.98636921643718,5.73521601505083,6.73471429276993,9.9807850421243,0,0,28.0305635620851,48.5648673496329,0.80275294993896,0.234423373184406,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,5.53566332312248,2.31485284767432,2.28041743095006,13.857490329693,21.2392221343941,9.46844481004428,16.0231485191318,22.0667943314401,24.5100571091041,17.8312385807478,14.7304127105886,11.9966130727577,13.1904030002347,12.3254335594968,18.9753495434998,22.6898195146011,16.3411010761818,1.44048875225048,2.97524972700335,5.14408884075822,6.20690817747958,4.8159580752559,3.1264313914403,2.43571959291679,1.40803024838226,1.0591603543191,19.4064990288366,2.80306630000516,4.03661066739764,2.17126529741361,2.50681922406587,2.9545361954111,94.4397910680716,0.18542530201051,0.683483523191411,2.27025554759545,0.740778109478847,0.376736914009382,0.136694227721025,0.457556346413045,0.509935289981566,0.419854356970974,0.552799895217695,58.2349076989219,0.949007980743406,7.1161813494397,14.148699647656,24.8815072257218,23.8015194483334,25.0847684275767,24.5480763504248,36.6458318777641,101.22929414089,28.5816084019986,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0,0,1.17183946359555,0.104859344425711,0.483168241652012,0.576060012515731,9.79634473947353,1.41907650703115,1.33524244314275,2.20865399062252,3.75956060901711,1.58945083825012,1.9231271923195,2.06765338044408,5.14928894735553,4.80102881926499,3.12561173924206,7.40679893622118,5.19543944857779,10.5189211963412,3.85441652145859,1.10992976687032,0,0,29.3648182928929,2.25218970541418,36.4471732291858,19.9362592543531,21.5676004735206,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,2.91728060481953,1.25767897576789,2.94149613520023,4.88942801163553,4.94484137373346,3.85103051510178,5.05394423527595,5.32306529769503,4.90428487603798,5.3375659257833,4.35371036353111,3.56099907524802,9.0495801343784,4.05595140806994,4.24400285020151,4.94503080963968,6.32955356577908,5.14303878578123,4.96932257246145,5.96090474868302,4.65108533223451,4.6113596403512,4.90764725771724,5.67076715905595,4.99832451731901,5.16055632614275,8.97827634652382,4.38949567059444,4.13718825977367,5.32000356120596,6.19747364743864,4.24394544158511,3.49734809113124,6.08222181958062,5.15690529715916,0.765153328275374,1.10295709559758,0.231867835620421 | |||
|short_description=p1@Tjp3 | |||
}} |
Revision as of 17:42, 12 September 2013
Short description: | p1@Tjp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tjp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000045744, ENSMUST00000092280, NM_013769, uc007gha.1_5end |
EntrezGene: | Tjp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.01e-10 | 25 |
intestinal epithelial cell | 4.83e-08 | 9 |
epithelial cell of alimentary canal | 4.83e-08 | 9 |
endodermal cell | 1.47e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
digestive system | 1.75e-20 | 116 |
digestive tract | 1.75e-20 | 116 |
primitive gut | 1.75e-20 | 116 |
endoderm-derived structure | 2.86e-20 | 118 |
endoderm | 2.86e-20 | 118 |
presumptive endoderm | 2.86e-20 | 118 |
subdivision of digestive tract | 2.96e-19 | 114 |
intestine | 1.04e-17 | 31 |
gastrointestinal system | 3.76e-16 | 47 |
mucosa | 4.67e-12 | 15 |
intestinal mucosa | 7.66e-11 | 13 |
wall of intestine | 7.66e-11 | 13 |
gastrointestinal system mucosa | 7.66e-11 | 13 |
simple columnar epithelium | 2.99e-08 | 11 |
epithelium of mucosa | 4.83e-08 | 9 |
gastrointestinal system epithelium | 4.83e-08 | 9 |
intestinal epithelium | 4.83e-08 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.