FFCP PHASE1:Mm9::chr11:100599467..100599526,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=19345|HGNC=|MCL_coexpression_id=1232|UniProt=A2A5F6|association_with_transcript=0bp_to_ENSMUST00000155500_5end|description=CAGE_peak_1_at_Rab5c_5end|id=chr11:100599467..100599526,-|ontology_enrichment_celltype=CL:0000144!4.88e-13!121;CL:0000012!4.88e-13!121;CL:0002371!4.99e-13!118;CL:0000548!1.55e-11!115;CL:0000004!1.55e-11!115;CL:0000255!1.55e-11!115;CL:0002321!1.09e-08!70;CL:0000220!1.09e-08!70;CL:0000723!4.36e-07!91;CL:0000048!4.36e-07!91;CL:0000055!7.22e-07!50;CL:0000063!8.93e-07!66|ontology_enrichment_celltype_v019_2=CL:0002321,1.09e-08,70;CL:0000723,4.36e-07,91;CL:0000048,4.36e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.55e-08,31|phase1_expression=37.7951279167314,162.971515367582,161.069730743896,114.331471873982,126.225723946479,63.2904855107825,49.0586545250604,49.066862907799,26.3274910423617,31.1305820008251,29.2782725665614,26.803445422433,30.1313284678922,39.8637035030628,46.9684764160084,52.4410942539649,81.149177862865,44.3224342328324,44.6993053554708,30.9804445812562,56.1285714997061,34.1560872131045,26.6423784921714,62.557037312222,70.199240006554,152.745702454595,125.351740882291,120.879361536784,104.132833862093,138.112511108442,88.027012730156,19.6859508772486,31.9833689543976,0,32.640233031894,40.2287841767551,32.4629276457167,175.783284909501,137.515020636189,137.686744665109,178.822372361428,165.297007359944,169.443113207873,40.1610849342091,41.2604110063424,40.5638322277316,151.78392080352,118.387659914582,114.895873570129,96.4372299408446,87.3515270942262,77.6263847570847,44.1268253931847,42.7963663786693,38.6507869013834,51.9664060792613,43.553082870691,50.5358650431893,61.5042041013177,45.4932242173948,48.8050180699758,121.306342480749,105.826080737226,235.773725927727,175.029346174354,228.064116897698,132.423248849135,201.714610293816,47.5935320495912,51.7072743810375,56.3670896421704,63.7001695220482,60.5179802207421,50.4662092765611,65.0790748213825,47.7993769037211,28.6301290598411,45.584379696412,41.4737639791857,60.1401472049684,71.909287871494,44.2776364973246,48.8570248252417,36.5795696520592,38.657956687533,35.6500588423138,41.0030440701416,51.6326464936083,61.716847566545,54.6382379572059,68.6978838222976,76.5777250513434,42.8381940235883,45.3350680975766,32.4888208723835,35.8421509677868,49.0151026259814,42.7780109670925,46.2419088193106,47.7008425588959,36.1967588826069,57.746914836443,30.5766287647975,49.7746692207332,35.7210217668503,41.044298206966,28.8148933658426,61.6592950482924,30.8136081540134,40.0793775475027,37.2993452547192,36.2313919191448,41.5107895060905,31.6517545160507,34.5710798978972,61.95362952553,53.1469180628904,38.0296308699368,38.9228642857945,27.5003644910596,40.413997878252,27.1530141755724,31.6865994070808,30.1564220921894,33.3020263833394,73.0607177896571,39.2993608379418,43.7928993625188,37.4857169865541,35.500381538943,41.1750542536764,39.9580839718909,37.8937018019163,37.5901722275586,33.6616632186487,39.4246269254651,28.8205399696395,36.9488702711976,40.435641349388,29.6723016799928,17.0457780281142,27.5882525320167,31.5108727159361,30.7437828384859,20.6830957420037,19.0889443224426,30.1719553082327,21.2136764005993,28.8861110530009,26.0966390631591,28.3281309903958,27.3994665534469,19.1852601965663,37.2629818178718,38.6870416446934,23.4860434845822,46.3460703626735,42.7197525810427,50.8652663918111,22.9909607514407,16.1822981386956,25.3887506660031,23.2009840873506,17.3152523937715,17.123649530499,17.672579801031,25.2176997315642,22.6524764192309,19.0889425899637,20.8492679380451,16.4569683378087,17.5439984910399,24.5896129125977,31.2700955711666,38.9036404843635,36.3253281698874,180.07823672617,66.3770922325496,20.2623838008472,22.9914305141834,33.5055399437443,42.958590744772,59.5973157504252,81.6067936022879,56.9434873853414,72.3028411238408,62.3311317824668,112.609363175291,69.4072150144068,57.5244421538702,53.8183744187989,58.547534336784,29.3985246477277,27.9908855893836,32.6852433451933,26.6783239477362,31.4203029211554,35.0679099451593,42.6846625588737,47.2352473534727,68.4514453388394,80.3315537130921,50.1004939777282,35.8716977289602,44.2257739004707,47.4459057132041,44.0206463413051,49.200140589493,40.9947621368086,41.1405476554659,23.023202202055,35.1438608880744,17.2521847832825,36.0976719238448,27.1472775609668,36.118779546437,34.4443033962071,39.5603687517961,46.3730507318178,35.6243854128511,30.4744505946588,23.424821836976,16.8976978767722,33.1662389734795,35.7065461329021,42.3440015851423,20.650203877911,27.0186921371505,30.774770350895,45.8817281204066,56.8133590338796,59.5954121355828,67.8560777726725,88.112720778631,30.9811492001993,28.6974216156922,39.334894547009,39.6175500681647,37.7050374366354,28.5292147740941,31.5508219416257,25.7689571235781,29.9438522848591,28.9152245522588,32.3058077419471,25.4768877709949,33.5992882390162,27.7643065015746,22.9266911208984,44.6636629826312,33.4978601091514,23.1485284767432,27.3650091714008,35.9634868080127,14.6019652173959,27.9197731578229,21.4649725444973,18.483297816078,34.8456233599312,27.9765984628974,47.5508059429527,27.6285634402904,29.5892824059319,14.2216541071117,11.5960469432499,20.6271086496374,28.2564872775644,26.2889197285713,18.3689330971511,37.0803070604655,26.2463545790565,31.9280183507706,25.3405491727266,40.1893732831271,30.9766654644098,32.6221389130283,36.1666572810138,24.8978241941635,18.2454802166373,23.5220407219808,21.6063942645677,24.7852758615042,53.6324739398925,40.9789917443226,39.471173464304,27.862227175035,39.0760452750092,35.978375287896,34.9937222965824,54.6779833963589,35.6954702987096,38.4866493890059,37.7285928486077,79.2376612952544,26.4140554640248,28.6680448648857,30.7815221342134,34.9177454344163,40.615436856789,30.6142066293543,29.4246302382196,70.935860277672,68.825550817942,35.4163408459548,54.6782150523665,21.6798991763769,32.0989471486769,27.2231663681667,30.8691978111777,16.3887441726055,28.8698807068555,22.9159717325352,23.8030711846364,30.1980151032508,36.291780788491,24.9648785296261,51.2894794684115,33.1756391642392,22.7361440211141,35.4472857421613,37.3520946988778,26.923780692473,27.7656311088205,23.1213170381258,25.7579006493899,27.828027097768,21.245818001266,37.8112537646495,33.894301632655,32.6491752405904,34.185836819606,23.95359971473,27.5330770837089,39.4106771825669,48.6097611418561,34.4325053622458,42.6593074367341,34.6084751784401,22.5900737046827,26.2385384809091,24.0616115644547,20.4505286988988,32.1988784292202,32.4819375877571,33.0761025113585,22.9663813644352,42.5953864445152,21.7459330935764,26.8809230243018,31.1239401252804,31.2442498530066,23.3382448385562,32.4900402073373,30.3341788942523,36.2262166316633,35.025959730612,31.1291633304061,34.8722152234041,34.7266640849628,30.3688409631583,34.0855087190372,36.1101859563463,43.9955692199998,46.2004880544581,39.9800924509751,46.1053036908255,41.2085900803307,36.3581332731961,31.8868404718436,27.6862257608566,37.6729180116767,26.8890870769808,34.161705090765,29.6997273699785,34.7563148458268,31.0422259496655,36.395502510691,22.4456908663095,37.8445707816116,40.386837773981,44.6061837054961,36.1002839963301,27.3927387593221,28.7282164628638,33.4522200076934,30.941431782955,24.484906504812,33.0887128679273,37.5625893705083|short_description=p1@Rab5c}} | ||
|EntrezGene=19345 | |||
|HGNC= | |||
|MCL_coexpression_id=1232 | |||
|UniProt=A2A5F6 | |||
|association_with_transcript=0bp_to_ENSMUST00000155500_5end | |||
|description=CAGE_peak_1_at_Rab5c_5end | |||
|id=chr11:100599467..100599526,- | |||
|ontology_enrichment_celltype=CL:0000144!4.88e-13!121;CL:0000012!4.88e-13!121;CL:0002371!4.99e-13!118;CL:0000548!1.55e-11!115;CL:0000004!1.55e-11!115;CL:0000255!1.55e-11!115;CL:0002321!1.09e-08!70;CL:0000220!1.09e-08!70;CL:0000723!4.36e-07!91;CL:0000048!4.36e-07!91;CL:0000055!7.22e-07!50;CL:0000063!8.93e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.09e-08,70;CL:0000723,4.36e-07,91;CL:0000048,4.36e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.55e-08,31 | |||
|phase1_expression=37.7951279167314,162.971515367582,161.069730743896,114.331471873982,126.225723946479,63.2904855107825,49.0586545250604,49.066862907799,26.3274910423617,31.1305820008251,29.2782725665614,26.803445422433,30.1313284678922,39.8637035030628,46.9684764160084,52.4410942539649,81.149177862865,44.3224342328324,44.6993053554708,30.9804445812562,56.1285714997061,34.1560872131045,26.6423784921714,62.557037312222,70.199240006554,152.745702454595,125.351740882291,120.879361536784,104.132833862093,138.112511108442,88.027012730156,19.6859508772486,31.9833689543976,0,32.640233031894,40.2287841767551,32.4629276457167,175.783284909501,137.515020636189,137.686744665109,178.822372361428,165.297007359944,169.443113207873,40.1610849342091,41.2604110063424,40.5638322277316,151.78392080352,118.387659914582,114.895873570129,96.4372299408446,87.3515270942262,77.6263847570847,44.1268253931847,42.7963663786693,38.6507869013834,51.9664060792613,43.553082870691,50.5358650431893,61.5042041013177,45.4932242173948,48.8050180699758,121.306342480749,105.826080737226,235.773725927727,175.029346174354,228.064116897698,132.423248849135,201.714610293816,47.5935320495912,51.7072743810375,56.3670896421704,63.7001695220482,60.5179802207421,50.4662092765611,65.0790748213825,47.7993769037211,28.6301290598411,45.584379696412,41.4737639791857,60.1401472049684,71.909287871494,44.2776364973246,48.8570248252417,36.5795696520592,38.657956687533,35.6500588423138,41.0030440701416,51.6326464936083,61.716847566545,54.6382379572059,68.6978838222976,76.5777250513434,42.8381940235883,45.3350680975766,32.4888208723835,35.8421509677868,49.0151026259814,42.7780109670925,46.2419088193106,47.7008425588959,36.1967588826069,57.746914836443,30.5766287647975,49.7746692207332,35.7210217668503,41.044298206966,28.8148933658426,61.6592950482924,30.8136081540134,40.0793775475027,37.2993452547192,36.2313919191448,41.5107895060905,31.6517545160507,34.5710798978972,61.95362952553,53.1469180628904,38.0296308699368,38.9228642857945,27.5003644910596,40.413997878252,27.1530141755724,31.6865994070808,30.1564220921894,33.3020263833394,73.0607177896571,39.2993608379418,43.7928993625188,37.4857169865541,35.500381538943,41.1750542536764,39.9580839718909,37.8937018019163,37.5901722275586,33.6616632186487,39.4246269254651,28.8205399696395,36.9488702711976,40.435641349388,29.6723016799928,17.0457780281142,27.5882525320167,31.5108727159361,30.7437828384859,20.6830957420037,19.0889443224426,30.1719553082327,21.2136764005993,28.8861110530009,26.0966390631591,28.3281309903958,27.3994665534469,19.1852601965663,37.2629818178718,38.6870416446934,23.4860434845822,46.3460703626735,42.7197525810427,50.8652663918111,22.9909607514407,16.1822981386956,25.3887506660031,23.2009840873506,17.3152523937715,17.123649530499,17.672579801031,25.2176997315642,22.6524764192309,19.0889425899637,20.8492679380451,16.4569683378087,17.5439984910399,24.5896129125977,31.2700955711666,38.9036404843635,36.3253281698874,180.07823672617,66.3770922325496,20.2623838008472,22.9914305141834,33.5055399437443,42.958590744772,59.5973157504252,81.6067936022879,56.9434873853414,72.3028411238408,62.3311317824668,112.609363175291,69.4072150144068,57.5244421538702,53.8183744187989,58.547534336784,29.3985246477277,27.9908855893836,32.6852433451933,26.6783239477362,31.4203029211554,35.0679099451593,42.6846625588737,47.2352473534727,68.4514453388394,80.3315537130921,50.1004939777282,35.8716977289602,44.2257739004707,47.4459057132041,44.0206463413051,49.200140589493,40.9947621368086,41.1405476554659,23.023202202055,35.1438608880744,17.2521847832825,36.0976719238448,27.1472775609668,36.118779546437,34.4443033962071,39.5603687517961,46.3730507318178,35.6243854128511,30.4744505946588,23.424821836976,16.8976978767722,33.1662389734795,35.7065461329021,42.3440015851423,20.650203877911,27.0186921371505,30.774770350895,45.8817281204066,56.8133590338796,59.5954121355828,67.8560777726725,88.112720778631,30.9811492001993,28.6974216156922,39.334894547009,39.6175500681647,37.7050374366354,28.5292147740941,31.5508219416257,25.7689571235781,29.9438522848591,28.9152245522588,32.3058077419471,25.4768877709949,33.5992882390162,27.7643065015746,22.9266911208984,44.6636629826312,33.4978601091514,23.1485284767432,27.3650091714008,35.9634868080127,14.6019652173959,27.9197731578229,21.4649725444973,18.483297816078,34.8456233599312,27.9765984628974,47.5508059429527,27.6285634402904,29.5892824059319,14.2216541071117,11.5960469432499,20.6271086496374,28.2564872775644,26.2889197285713,18.3689330971511,37.0803070604655,26.2463545790565,31.9280183507706,25.3405491727266,40.1893732831271,30.9766654644098,32.6221389130283,36.1666572810138,24.8978241941635,18.2454802166373,23.5220407219808,21.6063942645677,24.7852758615042,53.6324739398925,40.9789917443226,39.471173464304,27.862227175035,39.0760452750092,35.978375287896,34.9937222965824,54.6779833963589,35.6954702987096,38.4866493890059,37.7285928486077,79.2376612952544,26.4140554640248,28.6680448648857,30.7815221342134,34.9177454344163,40.615436856789,30.6142066293543,29.4246302382196,70.935860277672,68.825550817942,35.4163408459548,54.6782150523665,21.6798991763769,32.0989471486769,27.2231663681667,30.8691978111777,16.3887441726055,28.8698807068555,22.9159717325352,23.8030711846364,30.1980151032508,36.291780788491,24.9648785296261,51.2894794684115,33.1756391642392,22.7361440211141,35.4472857421613,37.3520946988778,26.923780692473,27.7656311088205,23.1213170381258,25.7579006493899,27.828027097768,21.245818001266,37.8112537646495,33.894301632655,32.6491752405904,34.185836819606,23.95359971473,27.5330770837089,39.4106771825669,48.6097611418561,34.4325053622458,42.6593074367341,34.6084751784401,22.5900737046827,26.2385384809091,24.0616115644547,20.4505286988988,32.1988784292202,32.4819375877571,33.0761025113585,22.9663813644352,42.5953864445152,21.7459330935764,26.8809230243018,31.1239401252804,31.2442498530066,23.3382448385562,32.4900402073373,30.3341788942523,36.2262166316633,35.025959730612,31.1291633304061,34.8722152234041,34.7266640849628,30.3688409631583,34.0855087190372,36.1101859563463,43.9955692199998,46.2004880544581,39.9800924509751,46.1053036908255,41.2085900803307,36.3581332731961,31.8868404718436,27.6862257608566,37.6729180116767,26.8890870769808,34.161705090765,29.6997273699785,34.7563148458268,31.0422259496655,36.395502510691,22.4456908663095,37.8445707816116,40.386837773981,44.6061837054961,36.1002839963301,27.3927387593221,28.7282164628638,33.4522200076934,30.941431782955,24.484906504812,33.0887128679273,37.5625893705083 | |||
|short_description=p1@Rab5c | |||
}} |
Revision as of 18:12, 12 September 2013
Short description: | p1@Rab5c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rab5c_5end |
Coexpression cluster: | MCL_coexpression_mm9:1232 |
Association with transcript: | 0bp_to_ENSMUST00000155500_5end |
EntrezGene: | Rab5c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.09e-08 | 70 |
somatic stem cell | 4.36e-07 | 91 |
multi fate stem cell | 4.36e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.55e-08 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.