CL:0000723
From FANTOM5_SSTAR
Name: | somatic stem cell | ||
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Namespace: | FANTOM | ||
Definition: | "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:0048103] | ||
Xrefs: |
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Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.
link to ontology dataset
data
Parents
is_a: | CL:0000034(stem cell),CL:0002371(somatic cell) |
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Children
is a: | CL:0000035 (single fate stem cell),CL:0000048 (multi fate stem cell),CL:0002248 (pluripotent stem cell),CL:1000428 (stem cell of epidermis) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10447-106F6
- 10568-108B1 (mesenchymal stem cell line:Hu5/E18)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 11214-116A8 (Mesenchymal stem cells - umbilical, donor0)
- 11217-116B2 (Mesenchymal stem cells - adipose, donor0)
- 11218-116B3 (Mesenchymal stem cells - hepatic, donor0)
- 11219-116B4 (Mesenchymal Stem Cells - Vertebral, donor1)
- 11229-116C5 (CD14+ monocyte derived endothelial progenitor cells, donor1)
- 11240-116D7 (Skeletal Muscle Satellite Cells, donor1)
- 11271-116H2 (Hair Follicle Dermal Papilla Cells, donor1)
... further results Mouse (Mus musculus)
- 10447-106F6
- 10568-108B1 (mesenchymal stem cell line:Hu5/E18)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 11214-116A8 (Mesenchymal stem cells - umbilical, donor0)
- 11217-116B2 (Mesenchymal stem cells - adipose, donor0)
- 11218-116B3 (Mesenchymal stem cells - hepatic, donor0)
- 11219-116B4 (Mesenchymal Stem Cells - Vertebral, donor1)
- 11229-116C5 (CD14+ monocyte derived endothelial progenitor cells, donor1)
- 11240-116D7 (Skeletal Muscle Satellite Cells, donor1)
- 11271-116H2 (Hair Follicle Dermal Papilla Cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000723 (somatic stem cell), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
2.78e-51 | FFCP PHASE1:Hg19::chr19:48828606..48828637,+#_0c48908a2d0ddbb83cfc211672e9ed3c | p2@EMP3 |
2.78e-51 | FFCP PHASE2:Hg19::chr19:48828606..48828637,+#_0c48908a2d0ddbb83cfc211672e9ed3c | p2@EMP3 |
9.5e-49 | FFCP PHASE2:Hg19::chr2:182322231..182322262,+#_7f4a7f8625ab92e506ed75223f4da16e | p2@ITGA4 |
9.5e-49 | FFCP PHASE1:Hg19::chr2:182322231..182322262,+#_7f4a7f8625ab92e506ed75223f4da16e | p2@ITGA4 |
1.49e-48 | FFCP PHASE1:Hg19::chr1:145096480..145096513,+#_3ba5f27597e8c87549d1f5b073fa37b8 | p2@SEC22B |
1.49e-48 | FFCP PHASE2:Hg19::chr1:145096480..145096513,+#_3ba5f27597e8c87549d1f5b073fa37b8 | p2@SEC22B |
1.29e-46 | FFCP PHASE1:Hg19::chr2:74781828..74781898,+#_ce5f2577242b262da853655144701482 | p1@DOK1 |
1.29e-46 | FFCP PHASE2:Hg19::chr2:74781828..74781898,+#_ce5f2577242b262da853655144701482 | p1@DOK1 |
1.42e-44 | FFCP PHASE2:Mm9::chr1:146456236..146456244,-#_c4810e77f136ec6dc8d287d77abb8063 | p1@ENSMUST00000157471 |
1.42e-44 | FFCP PHASE1:Mm9::chr1:146456236..146456244,-#_c4810e77f136ec6dc8d287d77abb8063 | p1@ENSMUST00000157471 |
1.2e-43 | FFCP PHASE2:Mm9::chr3:32910877..32910881,+#_91221acc49bd0f729dcf6a425d0a3a16 | p1@ENSMUST00000122716 |
1.2e-43 | FFCP PHASE1:Mm9::chr3:32910877..32910881,+#_91221acc49bd0f729dcf6a425d0a3a16 | p1@ENSMUST00000122716 |
5.0e-43 | FFCP PHASE2:Hg19::chr2:114647617..114647739,+#_ef3a8da15621dc6f58552065157d200a | p1@ACTR3 |
5.0e-43 | FFCP PHASE1:Hg19::chr2:114647617..114647739,+#_ef3a8da15621dc6f58552065157d200a | p1@ACTR3 |
2.32e-42 | FFCP PHASE2:Mm9::chr19:18807230..18807233,+#_c08038b1c15054efc5c6fd51454f3286 | p1@ENSMUST00000083007 |
2.32e-42 | FFCP PHASE1:Mm9::chr19:18807230..18807233,+#_c08038b1c15054efc5c6fd51454f3286 | p1@ENSMUST00000083007 |
4.79e-42 | FFCP PHASE2:Hg19::chr5:78281092..78281154,-#_746e8a3cc7d303a12f7025b18da301f3 | p1@ARSB |
4.79e-42 | FFCP PHASE1:Hg19::chr5:78281092..78281154,-#_746e8a3cc7d303a12f7025b18da301f3 | p1@ARSB |
7.27e-42 | FFCP PHASE1:Hg19::chr19:48828647..48828658,+#_b8fb3a437fcf233516bdb1f1ca0cc71f | p3@EMP3 |
7.27e-42 | FFCP PHASE2:Hg19::chr19:48828647..48828658,+#_b8fb3a437fcf233516bdb1f1ca0cc71f | p3@EMP3 |
1.17e-41 | FFCP PHASE2:Hg19::chr6:31704075..31704106,-#_ccb885aa6f408698bdfc960e29826e8e | p2@CLIC1 |
1.17e-41 | FFCP PHASE1:Hg19::chr6:31704075..31704106,-#_ccb885aa6f408698bdfc960e29826e8e | p2@CLIC1 |
2.16e-41 | FFCP PHASE1:Hg19::chr11:504446..504486,-#_151ceb9d7c934c49869e055cb8282842 | p4@RNH1 |
2.16e-41 | FFCP PHASE2:Hg19::chr11:504446..504486,-#_151ceb9d7c934c49869e055cb8282842 | p4@RNH1 |
5.63e-40 | FFCP PHASE2:Mm9::chr4:32085713..32085717,-#_874aab79d40e9f19a3bd1fcee5931806 | p1@ENSMUST00000122491 |
5.63e-40 | FFCP PHASE1:Mm9::chr4:32085713..32085717,-#_874aab79d40e9f19a3bd1fcee5931806 | p1@ENSMUST00000122491 |
9.7e-40 | FFCP PHASE1:Hg19::chr16:50300440..50300485,+#_33c1544d9700385924f2b1ae8f22d918 | p1@ADCY7 |
9.7e-40 | FFCP PHASE2:Hg19::chr16:50300440..50300485,+#_33c1544d9700385924f2b1ae8f22d918 | p1@ADCY7 |
1.07e-39 | FFCP PHASE2:Hg19::chr1:183604794..183604908,-#_409f45230a3c779ae01846b6057398cc | p1@ARPC5 |
1.07e-39 | FFCP PHASE1:Hg19::chr1:183604794..183604908,-#_409f45230a3c779ae01846b6057398cc | p1@ARPC5 |
3.99e-39 | FFCP PHASE2:Mm9::chr3:19460250..19460260,+#_9ac6447388926162036e3172723ca81a | p1@ENSMUST00000083241 |
3.99e-39 | FFCP PHASE1:Mm9::chr3:19460250..19460260,+#_9ac6447388926162036e3172723ca81a | p1@ENSMUST00000083241 |
5.79e-39 | FFCP PHASE2:Mm9::chr11:48596086..48596090,+#_cf04a3ba7c72e04df18928f636f279b2 | p@chr11:48596086..48596090, + |
5.79e-39 | FFCP PHASE1:Mm9::chr11:48596086..48596090,+#_cf04a3ba7c72e04df18928f636f279b2 | p@chr11:48596086..48596090, + |
2.16e-38 | FFCP PHASE2:Mm9::chr16:72264646..72264650,-#_955bab6bc979ea5cd209e2568074d26f | p@chr16:72264646..72264650, - |
2.16e-38 | FFCP PHASE1:Mm9::chr16:72264646..72264650,-#_955bab6bc979ea5cd209e2568074d26f | p@chr16:72264646..72264650, - |
4.54e-38 | FFCP PHASE1:Mm9::chr4:131826124..131826129,-#_ad39f2ce21aa2cc175bb3bf100c39de2 | p1@ENSMUST00000104135 |
4.54e-38 | FFCP PHASE2:Mm9::chr4:131826124..131826129,-#_ad39f2ce21aa2cc175bb3bf100c39de2 | p1@ENSMUST00000104135 |
5.72e-38 | FFCP PHASE1:Mm9::chr19:26334980..26334985,-#_14d4ad89b6ffd795dab722a84816babe | p1@ENSMUST00000122640 |
5.72e-38 | FFCP PHASE2:Mm9::chr19:26334980..26334985,-#_14d4ad89b6ffd795dab722a84816babe | p1@ENSMUST00000122640 |
5.74e-38 | FFCP PHASE1:Hg19::chr15:90358115..90358195,-#_475695113ee37cd749f1288f7226ebb7 | p3@ANPEP |
5.74e-38 | FFCP PHASE2:Hg19::chr15:90358115..90358195,-#_475695113ee37cd749f1288f7226ebb7 | p3@ANPEP |
6.45e-38 | FFCP PHASE2:Hg19::chr12:75874580..75874611,+#_77036bc2eb553887d7c4b170de2c7e64 | p2@GLIPR1 |
6.45e-38 | FFCP PHASE1:Hg19::chr12:75874580..75874611,+#_77036bc2eb553887d7c4b170de2c7e64 | p2@GLIPR1 |
1.1e-37 | FFCP PHASE1:Hg19::chr2:182322070..182322155,+#_e1e58476bdeefca341a4175f646d0302 | p1@ITGA4 |
1.1e-37 | FFCP PHASE2:Hg19::chr2:182322070..182322155,+#_e1e58476bdeefca341a4175f646d0302 | p1@ITGA4 |
4.91e-37 | FFCP PHASE2:Hg19::chr11:504867..504925,-#_f4520e7837b2ef2ba786a7d2f6f68776 | p3@RNH1 |
4.91e-37 | FFCP PHASE1:Hg19::chr11:504867..504925,-#_f4520e7837b2ef2ba786a7d2f6f68776 | p3@RNH1 |
9.41e-37 | FFCP PHASE1:Hg19::chr15:73076030..73076121,-#_8715feb4725a64f1b8d2a4f19b50cbf3 | p1@ADPGK |
9.41e-37 | FFCP PHASE2:Hg19::chr15:73076030..73076121,-#_8715feb4725a64f1b8d2a4f19b50cbf3 | p1@ADPGK |
1.33e-36 | FFCP PHASE2:Mm9::chr3:72925786..72925790,+#_a07d62bc0f939c64d5607d8d48b24d3e | p@chr3:72925786..72925790, + |
1.33e-36 | FFCP PHASE1:Mm9::chr3:72925786..72925790,+#_a07d62bc0f939c64d5607d8d48b24d3e | +, p@chr3:72925786..72925790 |
1.48e-36 | FFCP PHASE1:Hg19::chr12:110888103..110888172,-#_1a218e86d0f5311eafef0d461d6b290d | p1@ARPC3 |
1.48e-36 | FFCP PHASE2:Hg19::chr12:110888103..110888172,-#_1a218e86d0f5311eafef0d461d6b290d | p1@ARPC3 |
4.77e-36 | FFCP PHASE2:Mm9::chr14:106660467..106660471,-#_09f1ea1d06a977776b0493f07aefb56d | p1@ENSMUST00000083259 |
4.77e-36 | FFCP PHASE1:Mm9::chr14:106660467..106660471,-#_09f1ea1d06a977776b0493f07aefb56d | p1@ENSMUST00000083259 |
5.63e-36 | FFCP PHASE1:Hg19::chr18:18691563..18691610,-#_fe1159d2aadf1ded7a2826b94472bcf4 | p4@ROCK1 |
5.63e-36 | FFCP PHASE2:Hg19::chr18:18691563..18691610,-#_fe1159d2aadf1ded7a2826b94472bcf4 | p4@ROCK1 |
6.93e-36 | FFCP PHASE2:Hg19::chr1:46016703..46016755,+#_fcb1a508311dac057a42d4e67ee66b80 | p2@AKR1A1 |
6.93e-36 | FFCP PHASE1:Hg19::chr1:46016703..46016755,+#_fcb1a508311dac057a42d4e67ee66b80 | p2@AKR1A1 |
7.68e-36 | FFCP PHASE1:Hg19::chr15:90358048..90358103,-#_940b4d9aebd6a5d03f4d2141cdfcb96c | p1@ANPEP |
7.68e-36 | FFCP PHASE2:Hg19::chr15:90358048..90358103,-#_940b4d9aebd6a5d03f4d2141cdfcb96c | p1@ANPEP |
8.08e-36 | FFCP PHASE1:Hg19::chr1:20987936..20987969,-#_8663f5472807c8b32a2c7402c337338b | p2@DDOST |
8.08e-36 | FFCP PHASE2:Hg19::chr1:20987936..20987969,-#_8663f5472807c8b32a2c7402c337338b | p2@DDOST |
1.33e-35 | FFCP PHASE2:Mm9::chr10:104477319..104477348,+#_627c683cce30ca7ae0d8306645a3c2c2 | p1@ENSMUST00000082498 |
1.33e-35 | FFCP PHASE1:Mm9::chr10:104477319..104477348,+#_627c683cce30ca7ae0d8306645a3c2c2 | p1@ENSMUST00000082498 |
3.68e-35 | FFCP PHASE2:Hg19::chr2:102091566..102091581,-#_877c1a2881824b54bf87fcd371f20da9 | p1@RFX8 |
3.68e-35 | FFCP PHASE1:Hg19::chr2:102091566..102091581,-#_877c1a2881824b54bf87fcd371f20da9 | p1@RFX8 |
4.08e-35 | FFCP PHASE1:Hg19::chr11:504942..504959,-#_9a187166dd0cb4d77c8ca28e01a1e6e8 | p5@RNH1 |
4.08e-35 | FFCP PHASE2:Hg19::chr11:504942..504959,-#_9a187166dd0cb4d77c8ca28e01a1e6e8 | p5@RNH1 |
4.14e-35 | FFCP PHASE2:Hg19::chr9:35112376..35112395,-#_30bdd1db6024563b1a62f3f91789c6ae | p@chr9:35112376..35112395, - |
4.14e-35 | FFCP PHASE1:Hg19::chr9:35112376..35112395,-#_30bdd1db6024563b1a62f3f91789c6ae | -, p@chr9:35112376..35112395 |
4.18e-35 | FFCP PHASE2:Mm9::chr5:115939562..115939592,-#_940273588e9413fdc84f105aba9527c9 | p@chr5:115939562..115939592, - |
4.18e-35 | FFCP PHASE1:Mm9::chr5:115939562..115939592,-#_940273588e9413fdc84f105aba9527c9 | p@chr5:115939562..115939592, - |
4.79e-35 | FFCP PHASE1:Mm9::chr5:115939465..115939467,+#_ca5f7cfa1ffe72d4c6899f171c2c1cd3 | p1@ENSMUST00000102044 |
4.79e-35 | FFCP PHASE2:Mm9::chr5:115939465..115939467,+#_ca5f7cfa1ffe72d4c6899f171c2c1cd3 | p1@ENSMUST00000102044 |
5.54e-35 | FFCP PHASE2:Hg19::chr10:17271909..17272033,-#_d2df03533fe5b80334ba137067e470b6 | p1@uc001iot.1 |
5.54e-35 | FFCP PHASE1:Hg19::chr10:17271909..17272033,-#_d2df03533fe5b80334ba137067e470b6 | p1@uc001iot.1 |
9.86e-35 | FFCP PHASE1:Hg19::chrX:48432892..48432916,+#_a29ea57de99e7771e08cf19f00b4cf36 | p1@RBM3 |
9.86e-35 | FFCP PHASE2:Hg19::chrX:48432892..48432916,+#_a29ea57de99e7771e08cf19f00b4cf36 | p1@RBM3 |
1.27e-34 | FFCP PHASE2:Hg19::chr20:61584026..61584096,+#_aaa81e897b888cb49d78cd8eb0b518bb | p1@SLC17A9 |
1.27e-34 | FFCP PHASE1:Hg19::chr20:61584026..61584096,+#_aaa81e897b888cb49d78cd8eb0b518bb | p1@SLC17A9 |
1.48e-34 | FFCP PHASE2:Mm9::chr11:68834407..68834410,+#_bde1850e4ecffc8882f604a2f5fe5c54 | p@chr11:68834407..68834410, + |
1.48e-34 | FFCP PHASE1:Mm9::chr11:68834407..68834410,+#_bde1850e4ecffc8882f604a2f5fe5c54 | p@chr11:68834407..68834410, + |
3.9e-34 | FFCP PHASE2:Mm9::chr15:80870069..80870076,+#_9ff249a559a232a6816f757ff04e11ad | p1@ENSMUST00000082653 |
3.9e-34 | FFCP PHASE1:Mm9::chr15:80870069..80870076,+#_9ff249a559a232a6816f757ff04e11ad | p1@ENSMUST00000082653 |
4.09e-34 | FFCP PHASE1:Hg19::chr12:75874561..75874574,+#_a79694289e21a49beaaf80e05815336c | p3@GLIPR1 |
4.09e-34 | FFCP PHASE2:Hg19::chr12:75874561..75874574,+#_a79694289e21a49beaaf80e05815336c | p3@GLIPR1 |
5.21e-34 | FFCP PHASE2:Hg19::chr2:192542577..192542595,-#_aad44e24b6724d2dc7c6aa6d5e3c53c1 | p@chr2:192542577..192542595, - |
5.21e-34 | FFCP PHASE1:Hg19::chr2:192542577..192542595,-#_aad44e24b6724d2dc7c6aa6d5e3c53c1 | p@chr2:192542577..192542595, - |
7.39e-34 | FFCP PHASE1:Hg19::chr12:75874525..75874549,+#_0f42e00e3b9f650ffd93a24e58857852 | p1@GLIPR1 |
7.39e-34 | FFCP PHASE2:Hg19::chr12:75874525..75874549,+#_0f42e00e3b9f650ffd93a24e58857852 | p1@GLIPR1 |
7.52e-34 | FFCP PHASE1:Mm9::chr2:3208787..3208789,-#_060f4dfa4fd852460945a3aeb3272eda | p1@ENSMUST00000082795 |
7.52e-34 | FFCP PHASE2:Mm9::chr2:3208787..3208789,-#_060f4dfa4fd852460945a3aeb3272eda | p1@ENSMUST00000082795 |
8.98e-34 | FFCP PHASE2:Hg19::chr3:50378235..50378286,-#_0ffe7c02760babc1d44152362a8342f9 | p2@RASSF1 |
8.98e-34 | FFCP PHASE1:Hg19::chr3:50378235..50378286,-#_0ffe7c02760babc1d44152362a8342f9 | p2@RASSF1 |
1.02e-33 | FFCP PHASE1:Hg19::chr14:73930324..73930350,-#_93733e89a8d7a0b4b96a919d766ad87c | p2@NUMB |
1.02e-33 | FFCP PHASE2:Hg19::chr14:73930324..73930350,-#_93733e89a8d7a0b4b96a919d766ad87c | p2@NUMB |
1.08e-33 | FFCP PHASE2:Hg19::chr21:26934434..26934452,+#_a04af738bc8ca926ba6aff3b861cf667 | p1@MIR155HG |
1.08e-33 | FFCP PHASE1:Hg19::chr21:26934434..26934452,+#_a04af738bc8ca926ba6aff3b861cf667 | p1@MIR155HG |