FFCP PHASE1:Hg19::chr2:31637816..31637836,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7498|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12805|TSSclassifier=N|UniProt=P47989|association_with_transcript=-205bp_to_NM_000379,uc002rnv.1_5end|coexpression_cluster_id=C117|description=CAGE_peak_7_at_XDH_5end|id=chr2:31637816..31637836,-|ontology_enrichment_celltype=CL:0000244!1.46e-13!4;CL:0000731!1.46e-13!4;CL:0000066!2.51e-12!254;CL:0002076!4.70e-11!43;CL:0000223!4.98e-11!59;CL:0002149!4.37e-09!6;CL:0002255!4.37e-09!6;CL:0000239!1.64e-08!3;CL:1000615!1.64e-08!3;CL:0002306!1.64e-08!3;CL:0002621!1.64e-08!3;CL:0000313!2.95e-07!1;CL:0002159!5.29e-07!13|ontology_enrichment_celltype_v019=CL:0000313;1.23e-66;1!CL:0000159;3.61e-34;2!CL:0000244;9.45e-18;4!CL:0000731;9.45e-18;4|ontology_enrichment_celltype_v019_2=CL:0000313,1.23e-66,1;CL:0000159,3.61e-34,2;CL:0000244,1.03e-17,4;CL:0000731,1.03e-17,4|ontology_enrichment_development_v019=UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10|ontology_enrichment_disease=DOID:3001!4.37e-09!6;DOID:299!1.08e-07!25;DOID:305!2.92e-07!106;DOID:2152!2.95e-07!1|ontology_enrichment_disease_v019=DOID:2152;1.23e-66;1!DOID:4468;5.96e-34;2!DOID:299;1.06e-11;25!DOID:120;6.40e-11;27!DOID:193;3.03e-10;29|ontology_enrichment_disease_v019_2=DOID:2152,1.23e-66,1;DOID:4468,5.04e-34,2;DOID:299,1.03e-11,25;DOID:120,6.25e-11,27;DOID:193,2.96e-10,29|ontology_enrichment_uberon=UBERON:0000365!2.78e-18!5;UBERON:0005910!2.92e-15!6;UBERON:0006853!1.64e-08!3;UBERON:0007685!1.64e-08!3;UBERON:0004134!1.64e-08!3;UBERON:0001949!1.64e-08!3;UBERON:0004911!2.95e-07!1;UBERON:0004913!5.89e-07!1;UBERON:0003703!5.89e-07!1;UBERON:0001174!5.89e-07!1;UBERON:0004914!5.89e-07!1|ontology_enrichment_uberon_v019=UBERON:0004911;1.23e-66;1!UBERON:0004909;3.61e-34;2!UBERON:0000365;1.71e-14;5!UBERON:0005910;2.59e-12;6!UBERON:0000486;8.14e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.23e-66,1;UBERON:0004909,3.61e-34,2;UBERON:0000365,1.83e-14,5;UBERON:0005910,2.74e-12,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77495773870551,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.462102664601353,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0.31020638566432,0,4.25050640831611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0|short_description=p7@XDH}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7498 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12805 | |||
|TSSclassifier=N | |||
|UniProt=P47989 | |||
|association_with_transcript=-205bp_to_NM_000379,uc002rnv.1_5end | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_7_at_XDH_5end | |||
|id=chr2:31637816..31637836,- | |||
|ontology_enrichment_celltype=CL:0000244!1.46e-13!4;CL:0000731!1.46e-13!4;CL:0000066!2.51e-12!254;CL:0002076!4.70e-11!43;CL:0000223!4.98e-11!59;CL:0002149!4.37e-09!6;CL:0002255!4.37e-09!6;CL:0000239!1.64e-08!3;CL:1000615!1.64e-08!3;CL:0002306!1.64e-08!3;CL:0002621!1.64e-08!3;CL:0000313!2.95e-07!1;CL:0002159!5.29e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.23e-66;1!CL:0000159;3.61e-34;2!CL:0000244;9.45e-18;4!CL:0000731;9.45e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.23e-66,1;CL:0000159,3.61e-34,2;CL:0000244,1.03e-17,4;CL:0000731,1.03e-17,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10 | |||
|ontology_enrichment_disease=DOID:3001!4.37e-09!6;DOID:299!1.08e-07!25;DOID:305!2.92e-07!106;DOID:2152!2.95e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.23e-66;1!DOID:4468;5.96e-34;2!DOID:299;1.06e-11;25!DOID:120;6.40e-11;27!DOID:193;3.03e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.23e-66,1;DOID:4468,5.04e-34,2;DOID:299,1.03e-11,25;DOID:120,6.25e-11,27;DOID:193,2.96e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0000365!2.78e-18!5;UBERON:0005910!2.92e-15!6;UBERON:0006853!1.64e-08!3;UBERON:0007685!1.64e-08!3;UBERON:0004134!1.64e-08!3;UBERON:0001949!1.64e-08!3;UBERON:0004911!2.95e-07!1;UBERON:0004913!5.89e-07!1;UBERON:0003703!5.89e-07!1;UBERON:0001174!5.89e-07!1;UBERON:0004914!5.89e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.23e-66;1!UBERON:0004909;3.61e-34;2!UBERON:0000365;1.71e-14;5!UBERON:0005910;2.59e-12;6!UBERON:0000486;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.23e-66,1;UBERON:0004909,3.61e-34,2;UBERON:0000365,1.83e-14,5;UBERON:0005910,2.74e-12,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77495773870551,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.462102664601353,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0.31020638566432,0,4.25050640831611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@XDH | |||
}} |
Revision as of 18:19, 12 September 2013
Short description: | p7@XDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_XDH_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | -205bp_to_NM_000379, uc002rnv.1_5end |
EntrezGene: | XDH |
HGNC: | 12805 |
UniProt: | P47989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.23e-66 | 1 |
seromucus secreting cell | 3.61e-34 | 2 |
transitional epithelial cell | 1.03e-17 | 4 |
urothelial cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.23e-66 | 1 |
epithelium of gonad | 3.61e-34 | 2 |
urothelium | 1.83e-14 | 5 |
transitional epithelium | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.23e-66 | 1 |
clear cell adenocarcinoma | 5.04e-34 | 2 |
adenocarcinoma | 1.03e-11 | 25 |
female reproductive organ cancer | 6.25e-11 | 27 |
reproductive organ cancer | 2.96e-10 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.