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FFCP PHASE1:Mm9::chr11:3309165..3309198,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16886|HGNC=|UniProt=O54785|association_with_transcript=0bp_to_ENSMUST00000101638,ENSMUST00000125832,ENSMUST00000145223_5end|description=CAGE_peak_3_at_Limk2_5end|id=chr11:3309165..3309198,-|ontology_enrichment_celltype=CL:0002076!3.22e-08!15;CL:0000066!3.49e-07!25;CL:0002563!6.60e-07!9;CL:0002251!6.60e-07!9|ontology_enrichment_celltype_v019_2=CL:0002076,3.22e-08,15;CL:0000066,3.49e-07,25;CL:0002563,6.60e-07,9;CL:0002251,6.60e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.08e-20!59;UBERON:0004119!2.22e-19!130;UBERON:0000925!2.22e-19!130;UBERON:0006595!2.22e-19!130;UBERON:0000160!1.34e-18!43;UBERON:0001007!2.03e-18!128;UBERON:0001555!2.03e-18!128;UBERON:0007026!2.03e-18!128;UBERON:0004921!2.25e-17!126;UBERON:0004185!2.25e-17!126;UBERON:0000344!4.46e-10!15;UBERON:0001242!4.48e-09!13;UBERON:0000060!4.48e-09!13;UBERON:0001262!4.48e-09!13;UBERON:0004786!4.48e-09!13;UBERON:0004923!1.25e-08!24;UBERON:0000485!3.82e-07!11;UBERON:0002108!3.87e-07!16;UBERON:0003350!6.60e-07!9;UBERON:0004808!6.60e-07!9;UBERON:0001277!6.60e-07!9;UBERON:0000464!9.89e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.87e-16,47;UBERON:0004119,7.36e-15,118;UBERON:0000925,7.36e-15,118;UBERON:0006595,7.36e-15,118;UBERON:0000160,1.39e-14,31;UBERON:0001007,5.16e-14,116;UBERON:0001555,5.16e-14,116;UBERON:0007026,5.16e-14,116;UBERON:0004921,4.27e-13,114;UBERON:0000344,4.46e-10,15;UBERON:0001242,4.48e-09,13;UBERON:0001262,4.48e-09,13;UBERON:0004786,4.48e-09,13;UBERON:0004923,1.25e-08,24;UBERON:0000485,3.82e-07,11;UBERON:0003350,6.60e-07,9;UBERON:0004808,6.60e-07,9;UBERON:0001277,6.60e-07,9|phase1_expression=5.92550734287738,13.2610654902957,15.0149748998547,14.8207463540347,10.5188103288733,31.8970616632591,34.8082834487333,7.48915275961142,2.111830832275,1.87251621057595,1.88339765048055,2.39316476986009,8.38883576662908,7.43073420561478,3.99731714178795,5.26435695213547,3.49780939064073,5.99378114180652,3.83920414096069,2.97072756258621,6.37824676133023,2.18440092641948,1.56719873483361,13.759348360233,13.0763290208287,10.3361753540704,15.5074318617267,19.1769397090441,19.0023419456374,14.1136872665561,15.9645967671819,6.35030673459631,5.53558308826113,15.8481681015439,52.570994794732,35.4079794613589,53.9007100532654,16.3227335987394,10.1573594788094,6.28228492768558,15.8822501768374,21.8574555186703,11.1667381197165,2.7697299954627,1.4192770370732,1.65192076945513,3.12956537739216,4.14247797122848,4.17403747195497,4.6663175777828,3.91961980551015,2.87505128729943,4.02678254538567,7.25362142011344,5.37750078627942,3.34437266846731,3.15186783932632,2.06268836910977,3.23706337375356,4.7609188134483,1.26766280701236,3.38844532069132,0,5.39939830368839,0.988866362566974,3.5524005747305,2.39680088414724,8.06858441175265,3.7328260431052,3.91517221161903,2.94454945891935,3.42781181284564,4.8591079009355,3.79721477566358,3.54628242767475,1.83843757322004,1.10115880999389,5.61824287574826,3.37934373163736,2.90149833006426,3.11057988248193,2.6045668527838,5.30447698102624,4.50210088025344,5.65353516774197,3.53554302568401,4.41352210477219,4.47358669980721,1.36307147999731,0.831287161174641,14.4932244350839,3.44169550792555,2.719885334831,1.07940638327563,4.54843492213368,1.79210754838934,3.65155492342555,2.04516387093669,0.779358013808606,3.88673531961374,10.2815696436977,6.41632387071589,5.09610479413291,7.11066703153331,12.5564803786504,11.6545538118545,14.6602089054287,4.79572294820052,3.88406825470758,4.30482203287992,3.81667718885499,1.82679286987285,2.07553947530453,2.26083960828934,4.35078216402108,3.39299796590124,27.1914464507811,1.3013942122792,7.07688441559899,1.94120219936891,2.42925670306433,3.39412677194655,13.0474232852686,12.5895742714965,13.6140359428746,18.9038220854358,1.7972268675888,2.39961092397363,3.17675567682662,6.29120685500255,4.11750542536764,3.8952849154988,3.99795936442236,2.55715457330331,7.2725815595846,5.353961681236,3.25885964321012,5.349499736234,4.29628689337247,3.99839526184301,2.99277018814219,3.90833577536904,3.42118046630164,4.67184935290717,5.23881043465224,4.35586648968489,5.80950692270319,7.50239775143145,2.58681591519411,3.78212160335639,3.87092473160687,3.5071317188412,3.33656699070717,3.48252166522167,5.14455341019859,6.56813080501028,2.1066395619397,1.80143534980301,3.12579849335152,4.14251545071004,4.69052119962192,3.42117916775928,3.55117103377815,3.93528463494808,3.23960937063494,1.86027155800326,1.60964040839772,3.97002164048376,3.78487654801005,2.95501435342371,2.99954595319666,2.33919979880532,3.51280184465681,3.62357330653004,5.67782861123144,1.9551876352064,10.9038198384653,9.78467096655114,3.19932375802851,5.80591679651096,7.7320476793256,9.4791256572971,8.00560957841533,8.3699275489526,10.4396393539793,6.91735609840846,11.5614196048124,9.54991065797524,11.307917052909,13.4822911298133,17.5071820398502,21.706398784726,2.84501851429623,3.19895835307241,5.63538678365402,3.25842124552503,3.68509725618489,3.71719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|EntrezGene=16886
|HGNC=
|UniProt=O54785
|association_with_transcript=0bp_to_ENSMUST00000101638,ENSMUST00000125832,ENSMUST00000145223_5end
|description=CAGE_peak_3_at_Limk2_5end
|id=chr11:3309165..3309198,-
|ontology_enrichment_celltype=CL:0002076!3.22e-08!15;CL:0000066!3.49e-07!25;CL:0002563!6.60e-07!9;CL:0002251!6.60e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002076,3.22e-08,15;CL:0000066,3.49e-07,25;CL:0002563,6.60e-07,9;CL:0002251,6.60e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!4.08e-20!59;UBERON:0004119!2.22e-19!130;UBERON:0000925!2.22e-19!130;UBERON:0006595!2.22e-19!130;UBERON:0000160!1.34e-18!43;UBERON:0001007!2.03e-18!128;UBERON:0001555!2.03e-18!128;UBERON:0007026!2.03e-18!128;UBERON:0004921!2.25e-17!126;UBERON:0004185!2.25e-17!126;UBERON:0000344!4.46e-10!15;UBERON:0001242!4.48e-09!13;UBERON:0000060!4.48e-09!13;UBERON:0001262!4.48e-09!13;UBERON:0004786!4.48e-09!13;UBERON:0004923!1.25e-08!24;UBERON:0000485!3.82e-07!11;UBERON:0002108!3.87e-07!16;UBERON:0003350!6.60e-07!9;UBERON:0004808!6.60e-07!9;UBERON:0001277!6.60e-07!9;UBERON:0000464!9.89e-07!57
|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.87e-16,47;UBERON:0004119,7.36e-15,118;UBERON:0000925,7.36e-15,118;UBERON:0006595,7.36e-15,118;UBERON:0000160,1.39e-14,31;UBERON:0001007,5.16e-14,116;UBERON:0001555,5.16e-14,116;UBERON:0007026,5.16e-14,116;UBERON:0004921,4.27e-13,114;UBERON:0000344,4.46e-10,15;UBERON:0001242,4.48e-09,13;UBERON:0001262,4.48e-09,13;UBERON:0004786,4.48e-09,13;UBERON:0004923,1.25e-08,24;UBERON:0000485,3.82e-07,11;UBERON:0003350,6.60e-07,9;UBERON:0004808,6.60e-07,9;UBERON:0001277,6.60e-07,9
|phase1_expression=5.92550734287738,13.2610654902957,15.0149748998547,14.8207463540347,10.5188103288733,31.8970616632591,34.8082834487333,7.48915275961142,2.111830832275,1.87251621057595,1.88339765048055,2.39316476986009,8.38883576662908,7.43073420561478,3.99731714178795,5.26435695213547,3.49780939064073,5.99378114180652,3.83920414096069,2.97072756258621,6.37824676133023,2.18440092641948,1.56719873483361,13.759348360233,13.0763290208287,10.3361753540704,15.5074318617267,19.1769397090441,19.0023419456374,14.1136872665561,15.9645967671819,6.35030673459631,5.53558308826113,15.8481681015439,52.570994794732,35.4079794613589,53.9007100532654,16.3227335987394,10.1573594788094,6.28228492768558,15.8822501768374,21.8574555186703,11.1667381197165,2.7697299954627,1.4192770370732,1.65192076945513,3.12956537739216,4.14247797122848,4.17403747195497,4.6663175777828,3.91961980551015,2.87505128729943,4.02678254538567,7.25362142011344,5.37750078627942,3.34437266846731,3.15186783932632,2.06268836910977,3.23706337375356,4.7609188134483,1.26766280701236,3.38844532069132,0,5.39939830368839,0.988866362566974,3.5524005747305,2.39680088414724,8.06858441175265,3.7328260431052,3.91517221161903,2.94454945891935,3.42781181284564,4.8591079009355,3.79721477566358,3.54628242767475,1.83843757322004,1.10115880999389,5.61824287574826,3.37934373163736,2.90149833006426,3.11057988248193,2.6045668527838,5.30447698102624,4.50210088025344,5.65353516774197,3.53554302568401,4.41352210477219,4.47358669980721,1.36307147999731,0.831287161174641,14.4932244350839,3.44169550792555,2.719885334831,1.07940638327563,4.54843492213368,1.79210754838934,3.65155492342555,2.04516387093669,0.779358013808606,3.88673531961374,10.2815696436977,6.41632387071589,5.09610479413291,7.11066703153331,12.5564803786504,11.6545538118545,14.6602089054287,4.79572294820052,3.88406825470758,4.30482203287992,3.81667718885499,1.82679286987285,2.07553947530453,2.26083960828934,4.35078216402108,3.39299796590124,27.1914464507811,1.3013942122792,7.07688441559899,1.94120219936891,2.42925670306433,3.39412677194655,13.0474232852686,12.5895742714965,13.6140359428746,18.9038220854358,1.7972268675888,2.39961092397363,3.17675567682662,6.29120685500255,4.11750542536764,3.8952849154988,3.99795936442236,2.55715457330331,7.2725815595846,5.353961681236,3.25885964321012,5.349499736234,4.29628689337247,3.99839526184301,2.99277018814219,3.90833577536904,3.42118046630164,4.67184935290717,5.23881043465224,4.35586648968489,5.80950692270319,7.50239775143145,2.58681591519411,3.78212160335639,3.87092473160687,3.5071317188412,3.33656699070717,3.48252166522167,5.14455341019859,6.56813080501028,2.1066395619397,1.80143534980301,3.12579849335152,4.14251545071004,4.69052119962192,3.42117916775928,3.55117103377815,3.93528463494808,3.23960937063494,1.86027155800326,1.60964040839772,3.97002164048376,3.78487654801005,2.95501435342371,2.99954595319666,2.33919979880532,3.51280184465681,3.62357330653004,5.67782861123144,1.9551876352064,10.9038198384653,9.78467096655114,3.19932375802851,5.80591679651096,7.7320476793256,9.4791256572971,8.00560957841533,8.3699275489526,10.4396393539793,6.91735609840846,11.5614196048124,9.54991065797524,11.307917052909,13.4822911298133,17.5071820398502,21.706398784726,2.84501851429623,3.19895835307241,5.63538678365402,3.25842124552503,3.68509725618489,3.71719845418688,5.43834219268613,2.95220295959204,4.86696056308262,5.42947521255922,1.48226313543574,2.66952169145751,1.37591296579242,2.69834534861824,2.63718157805054,2.41177159752417,3.8193877767213,2.87696137450811,3.56697498905078,2.47105271869273,4.31304619582064,5.20997326735905,4.99260276983297,4.2938409251009,3.22915344339442,6.27176577772377,13.3022296919955,4.9267767060326,3.7481944581666,5.60158783058121,6.33663670378956,7.37027532743989,8.80761471278251,7.41507861859636,9.77337893458384,9.30151696524855,7.97273843287435,11.3065687153859,9.15230403889247,13.4523624480806,3.01582567878545,1.08781136763742,2.95058563811422,2.20749397043786,8.66973185934077,6.32943107597897,0.819674726883377,5.30188947129183,3.78609863299508,2.73307121007647,3.01592756825919,4.30143836314594,3.11918143715352,3.11384183867716,4.85772842009873,4.38383786866968,2.76701444562566,6.42642632843614,8.23252494207958,4.98583690268315,3.09485222771795,10.8880281161873,9.2921596837974,7.52619972080442,8.16273603804828,9.43025398779491,6.79194353625777,6.7635732547664,6.71913562237375,8.36127577798263,11.4079161083111,9.16506598013866,12.6502330289999,15.470331487228,6.80879211507576,5.94201610303324,4.65691261617916,6.21577401591618,7.09360934569094,3.92411398724555,4.77192159746151,5.48036908406279,9.1521966144847,14.192748747876,8.15955072803359,3.79238381765404,5.16686165426898,3.43783672090488,4.65552141612232,3.77524069413641,11.0762717919343,8.15871328846243,4.61351378154202,3.714963623338,3.33350149265481,4.1441060541032,3.96413260390973,6.17701067657611,3.0596117398894,3.21888340344413,2.76399947608848,13.3653886522116,6.80122386199441,6.70954241518601,8.10040056163509,8.15444354456428,9.60795280483181,7.8221320903196,10.7449492442937,14.3965768091216,14.6464919819726,9.94142900939081,5.6369293868419,4.78452947340732,4.63283773279873,4.86127970860119,2.19571699912143,3.54807863530634,3.99014611395563,5.208175393758,6.8158573876712,5.07326653734613,5.47257011889944,7.90027801570446,5.87903124341476,6.57350125854894,6.49604114888975,6.08690765269437,4.56967115996909,5.4087952283986,6.35064966850682,5.04832249740738,6.93481940560499,6.04957110821043,5.65255708290564,4.32953287381483,6.89573722871257,4.30787728868902,5.99362074109975,1.79427713218951,2.51826924546118,14.2960299583821,5.44279178808428,17.948859178192,10.0753138167161,3.00943262421218,6.21227026878773,0.920650473014354,1.71868654031819,2.749650917499,3.42541259885321,3.0215755895588,2.02506750069542,4.5032120322422,3.62513927187364,0.51776031175182,2.80225838477277,2.39414924040619,6.14640980714883,2.67417388775123,5.24032906569956,4.22840069435032,5.11167473943715,4.32673620201678,6.09746498224449,4.54854981174835,6.84394109703647,4.90428487603798,3.37109426891577,3.90553429669703,4.47996657853783,4.28664322154766,5.09891034157364,5.40145817298374,3.70877310722976,1.76638704161277,3.42869252385415,4.43689515398344,3.57654284920981,3.92435324907287,4.6113596403512,4.06150117880047,4.20734337607377,2.36762740294059,3.80251518768413,3.36685362994643,3.55905054372522,3.64466584789585,4.91077251803627,4.18329471202108,3.66522560864169,4.99621155875892,3.04111090979031,4.29742108096597,3.44318997723918,3.97064554415128,2.55054619182464
|short_description=p3@Limk2
}}

Revision as of 19:30, 12 September 2013

Short description:p3@Limk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Limk2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000101638, ENSMUST00000125832, ENSMUST00000145223_5end
EntrezGene:Limk2
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p3@Limk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.82
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I731.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I834.81
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.39
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.43
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.08
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I115.51
GP2+ M cell, pool3.CNhs13240.11847-124I219.18
Ileum epithelium, pool1.CNhs13199.10252-104B919.00
Ileum epithelium, pool2.CNhs13232.10253-104C114.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F552.57
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F635.41
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F753.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H221.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.38
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.66
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C53.82
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C14.35
adrenal gland, neonate N25.CNhs11223.1377-27I33.39
amnion, adult pregnant day17.5.CNhs10488.583-22A827.19
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B212.59
cerebellum, neonate N30.CNhs11135.1395-42I213.61
colon, adult.CNhs10468.36-18H718.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.35
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C65.24
eyeball, neonate N01.CNhs11140.1532-43E74.36
eyeball, neonate N02.CNhs11205.1551-44G85.81
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G13.00
heart, neonate N20.CNhs11127.821-26I62.34
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I310.90
intestine, adult.CNhs10496.178-9A39.78
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D87.73
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D38.01
intestine, embryo E18.CNhs10526.1289-20F78.37
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E96.92
intestine, neonate N06.CNhs11102.688-20B811.56
intestine, neonate N07.CNhs11095.720-20F29.55
intestine, neonate N10.CNhs11098.755-23A511.31
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E317.51
intestine, neonate N30.CNhs11131.1384-42G121.71
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F83.20
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G73.72
kidney, neonate N10.CNhs11206.758-6D55.44
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B113.30
lung, embryo E12.CNhs10522.354-16G24.93
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B66.34
lung, embryo E17.CNhs10605.480-44A67.37
lung, embryo E18.CNhs10583.1287-20I68.81
lung, neonate N00.CNhs11224.640-42C67.42
lung, neonate N06.CNhs11212.683-20E59.77
lung, neonate N07.CNhs11111.715-19A39.30
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A411.31
lung, neonate N25.CNhs11119.1359-25C79.15
lung, neonate N30.CNhs11133.1394-42H213.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C28.67
medulla oblongata, neonate N30.CNhs11200.1396-42A36.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I78.23
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G610.89
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F47.53
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E59.43
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G96.72
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D811.41
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E65.94
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A56.22
pituitary gland, embryo E15.CNhs10592.427-16B97.09
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I79.15
placenta, adult pregnant day17.CNhs10464.577-18G314.19
prostate, adult.CNhs10470.859-1F88.16
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H33.44
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I111.08
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H13.96
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E36.80
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D48.10
stomach, embryo E17.CNhs11006.1035-18D58.15
stomach, embryo E18.CNhs10999.1286-20C69.61
stomach, neonate N03.CNhs11193.1340-24B87.82
stomach, neonate N07.CNhs11210.718-18A910.74
stomach, neonate N25.CNhs11104.1355-25E414.40
stomach, neonate N30.CNhs11134.1386-42I114.65
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C54.63
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I45.21
testis, neonate N10.CNhs11204.763-44D96.82
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I45.88
thymus, embryo E15.CNhs11005.430-45I26.57
thymus, embryo E16.CNhs11002.456-26C56.50
thymus, embryo E17.CNhs10581.478-18C16.09
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F85.41
thymus, neonate N03.CNhs11137.2104-43C76.35
thymus, neonate N06.CNhs11197.681-26C45.05
thymus, neonate N07.CNhs11211.713-19D36.93
thymus, neonate N10.CNhs11194.748-24E46.05
thymus, neonate N20.CNhs11186.820-7A25.65
thymus, neonate N25.CNhs11125.1362-25G74.33
thymus, neonate N30.CNhs11132.1393-42G26.90
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E414.30
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E517.95
vagina, adult.CNhs10502.89-27D510.08
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H26.15
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen
endo-epithelial cell3.22e-0815
epithelial cell3.49e-0725
intestinal epithelial cell6.60e-079
epithelial cell of alimentary canal6.60e-079







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