FFCP PHASE1:Mm9::chr11:50109704..50109715,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:50109704..50109715,-|id=chr11:50109704..50109715,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.49e-07,3;CL:0002202,1.49e-07,3;CL:0000069,1.49e-07,3;CL:0002632,1.49e-07,3;CL:0002368,1.49e-07,3;CL:0000307,1.49e-07,3;CL:0000377,1.49e-07,3;CL:0002321,6.40e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.49e-07,3;UBERON:0001005,1.49e-07,3;UBERON:0007196,1.49e-07,3;UBERON:0001558,1.49e-07,3;UBERON:0000331,2.47e-07,3;UBERON:0002116,2.47e-07,3;UBERON:0001204,2.47e-07,3;UBERON:0001168,2.47e-07,3|phase1_expression=0.160148847104794,0.348975407639361,0,0.90739263392049,0,0.33575854382378,0.700837921786577,0.258246646883153,0.422366166455,0.234064526321993,1.36974374580404,0.558405112967355,0.171200729931206,0.524522414513984,0.333109761815663,0.404950534779652,1.39912375625629,0.315462165358238,0.274228867211478,0,0.255129870453209,0.992909512008853,0,0.799962113967033,0.45881856213434,0.57423196411502,0.86152399231815,0.215471232685889,2.09025761402011,1.00812051903972,1.55211357458713,0,0,0,1.1554064790051,0.498703936075477,0.612508068787107,0.418531630736908,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,1.51076181570693,0.608261587317087,2.0190142737785,0,0.436050312760893,0.439372365468944,1.36100929351998,0.699932108126813,0,1.17447824240415,0,0,0.514518872071894,1.71920063963254,1.03134418455488,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0,0,0,0.311068836925433,0,0,1.14260393761521,0.441737081903227,0.122490799214954,0.479227355091182,0.919218786610021,0,1.0214987046815,0.921639199537461,0.263772575460388,0.457438218012048,1.04182674111352,0.837548997004143,1.12552522006336,1.22238598221448,0.883885756421003,0.427115042397309,0.559198337475902,1.8931548333296,0.831287161174641,0.289864488701678,0.860423876981386,0,4.31762553310254,1.29955283489534,0,0.280888840263504,0.681721290312231,1.29893002301434,0.70667914902068,1.12674735821344,1.28326477414318,0,0,1.08245520505607,2.28023878927589,1.51657333504435,1.02765491747154,0,0.29688427812965,0.693941307064543,0,0.230615497256059,0.904335843315735,0.23517741427141,0.879666139307728,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0.958520996047362,0,1.90605340609597,0.299581278809645,0,0.251308704225729,0.521472960576829,0.255715457330331,0.41557608911912,0.486723789203273,0.305518091550949,0.870848794270651,0.758168275301024,0.420883711772948,0.520481771850815,0.229902104433473,0.180062129805349,0.60281927134286,0.272145996605311,0.768682321709099,0.374806898238915,0.776110112217047,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0.51469581422943,0.568326998791185,0.207125772535502,0.703578179943289,0.540186184383045,0.23674473558521,0.393528463494808,1.23413690309903,0.465067889500816,0.268273401399619,0.467061369468678,0.493679549740441,0.985004784474571,0.0810688095458557,0.438599962275997,0.439100230582101,0.268412837520744,0,0.205809224758569,0,0.528901133327089,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0.988193728344065,1.25667604400135,0.397912944082302,0.779856348476481,0,1.72910439899755,0.597423819763102,0.189667900953082,0.456994050438915,0,0.610953983535943,0.969762435838129,0.280543279561274,0.505892296994058,0.442830443938806,0.941992367048249,0.616985819609003,0.296452627087149,0.166845105716094,0.786235980452812,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0.823684239564244,1.43768206527355,0,0.624075346229121,0.505157755894224,0.896987067609561,0,0,0,0.162964976442026,0.169745085775188,0.704070744865506,0,0,0,0.315270288212382,0,0.478364305972461,0.163863314715738,1.03610989119537,0.289298117163023,3.01582567878545,2.17562273527484,0.491764273019036,0,0.160550589987792,0.586058432961016,0.327869890753351,0.252470927204373,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0.35613120733451,0.488660878060728,0,0,0.728341908464944,0.906970670894253,1.32023555829129,0,0.922305443831782,0,1.09060118843252,0.356497378384721,0.948110273807448,0,1.03135543248187,0.680879211507576,0.36012218806262,0.258717367565509,0.214337035031592,0,0.535106452806212,0.987294123612726,0.608929898229199,0.469343416127421,1.0591603543191,0.441056796109924,0,0.322928853391811,0.542816324353403,0.119372344003136,0.328281799490123,0.291480836629851,0.370850604021019,0,0.206386867963223,0.185194527369712,0.565105371014073,0.683471138605126,0.457556346413045,0,0.279902904647316,0.552799895217695,0.954670618015114,0.158167996790568,0.203319467126849,0.648032044930808,0.209088296014469,0.436725127492355,0.134864346384821,0.495920734352016,0.26175594198403,0.388844919875379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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:50109704..50109715,- | |||
|id=chr11:50109704..50109715,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.49e-07,3;CL:0002202,1.49e-07,3;CL:0000069,1.49e-07,3;CL:0002632,1.49e-07,3;CL:0002368,1.49e-07,3;CL:0000307,1.49e-07,3;CL:0000377,1.49e-07,3;CL:0002321,6.40e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.49e-07,3;UBERON:0001005,1.49e-07,3;UBERON:0007196,1.49e-07,3;UBERON:0001558,1.49e-07,3;UBERON:0000331,2.47e-07,3;UBERON:0002116,2.47e-07,3;UBERON:0001204,2.47e-07,3;UBERON:0001168,2.47e-07,3 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0.90739263392049,0,0.33575854382378,0.700837921786577,0.258246646883153,0.422366166455,0.234064526321993,1.36974374580404,0.558405112967355,0.171200729931206,0.524522414513984,0.333109761815663,0.404950534779652,1.39912375625629,0.315462165358238,0.274228867211478,0,0.255129870453209,0.992909512008853,0,0.799962113967033,0.45881856213434,0.57423196411502,0.86152399231815,0.215471232685889,2.09025761402011,1.00812051903972,1.55211357458713,0,0,0,1.1554064790051,0.498703936075477,0.612508068787107,0.418531630736908,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,1.51076181570693,0.608261587317087,2.0190142737785,0,0.436050312760893,0.439372365468944,1.36100929351998,0.699932108126813,0,1.17447824240415,0,0,0.514518872071894,1.71920063963254,1.03134418455488,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0,0,0,0.311068836925433,0,0,1.14260393761521,0.441737081903227,0.122490799214954,0.479227355091182,0.919218786610021,0,1.0214987046815,0.921639199537461,0.263772575460388,0.457438218012048,1.04182674111352,0.837548997004143,1.12552522006336,1.22238598221448,0.883885756421003,0.427115042397309,0.559198337475902,1.8931548333296,0.831287161174641,0.289864488701678,0.860423876981386,0,4.31762553310254,1.29955283489534,0,0.280888840263504,0.681721290312231,1.29893002301434,0.70667914902068,1.12674735821344,1.28326477414318,0,0,1.08245520505607,2.28023878927589,1.51657333504435,1.02765491747154,0,0.29688427812965,0.693941307064543,0,0.230615497256059,0.904335843315735,0.23517741427141,0.879666139307728,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0.958520996047362,0,1.90605340609597,0.299581278809645,0,0.251308704225729,0.521472960576829,0.255715457330331,0.41557608911912,0.486723789203273,0.305518091550949,0.870848794270651,0.758168275301024,0.420883711772948,0.520481771850815,0.229902104433473,0.180062129805349,0.60281927134286,0.272145996605311,0.768682321709099,0.374806898238915,0.776110112217047,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0.51469581422943,0.568326998791185,0.207125772535502,0.703578179943289,0.540186184383045,0.23674473558521,0.393528463494808,1.23413690309903,0.465067889500816,0.268273401399619,0.467061369468678,0.493679549740441,0.985004784474571,0.0810688095458557,0.438599962275997,0.439100230582101,0.268412837520744,0,0.205809224758569,0,0.528901133327089,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0.988193728344065,1.25667604400135,0.397912944082302,0.779856348476481,0,1.72910439899755,0.597423819763102,0.189667900953082,0.456994050438915,0,0.610953983535943,0.969762435838129,0.280543279561274,0.505892296994058,0.442830443938806,0.941992367048249,0.616985819609003,0.296452627087149,0.166845105716094,0.786235980452812,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0.823684239564244,1.43768206527355,0,0.624075346229121,0.505157755894224,0.896987067609561,0,0,0,0.162964976442026,0.169745085775188,0.704070744865506,0,0,0,0.315270288212382,0,0.478364305972461,0.163863314715738,1.03610989119537,0.289298117163023,3.01582567878545,2.17562273527484,0.491764273019036,0,0.160550589987792,0.586058432961016,0.327869890753351,0.252470927204373,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0.35613120733451,0.488660878060728,0,0,0.728341908464944,0.906970670894253,1.32023555829129,0,0.922305443831782,0,1.09060118843252,0.356497378384721,0.948110273807448,0,1.03135543248187,0.680879211507576,0.36012218806262,0.258717367565509,0.214337035031592,0,0.535106452806212,0.987294123612726,0.608929898229199,0.469343416127421,1.0591603543191,0.441056796109924,0,0.322928853391811,0.542816324353403,0.119372344003136,0.328281799490123,0.291480836629851,0.370850604021019,0,0.206386867963223,0.185194527369712,0.565105371014073,0.683471138605126,0.457556346413045,0,0.279902904647316,0.552799895217695,0.954670618015114,0.158167996790568,0.203319467126849,0.648032044930808,0.209088296014469,0.436725127492355,0.134864346384821,0.495920734352016,0.26175594198403,0.388844919875379,0,0.56369293868419,0.149516546043979,0.330916980914195,0,0.387479470433193,0.844780627453891,0.469428954583016,0.39061315453185,0,0.241584120826006,0.864090018773596,0,0.202725215290164,0.616265742988964,0.389762468933385,0.179026695667481,0,0.360586348559907,0.443068581523732,0.100966449948148,0.228620419965,0.403304740547362,0.292373642219257,0.0962118416403295,0.350630706544707,0.226730383615211,0,0.448569283047378,0.335769232728157,0,0.375364950902364,0.36630324853453,0,0.501572104035363,0,0,0,0.515559547031063,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0.207574695168353,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074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| |||
|short_description=p@chr11:50109704..50109715,- | |||
}} | |||
Revision as of 19:49, 12 September 2013
| Short description: | p@chr11:50109704..50109715, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr11:50109704..50109715, - |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| duct epithelial cell | 1.49e-07 | 3 |
| epithelial cell of tracheobronchial tree | 1.49e-07 | 3 |
| branched duct epithelial cell | 1.49e-07 | 3 |
| epithelial cell of lower respiratory tract | 1.49e-07 | 3 |
| respiratory epithelial cell | 1.49e-07 | 3 |
| tracheal epithelial cell | 1.49e-07 | 3 |
| tracheoblast | 1.49e-07 | 3 |
| embryonic cell | 6.40e-07 | 70 |
| Ontology term | p-value | n |
|---|---|---|
| trachea | 1.49e-07 | 3 |
| respiratory airway | 1.49e-07 | 3 |
| tracheobronchial tree | 1.49e-07 | 3 |
| lower respiratory tract | 1.49e-07 | 3 |
| ileal mucosa | 2.47e-07 | 3 |
| ileum | 2.47e-07 | 3 |
| mucosa of small intestine | 2.47e-07 | 3 |
| wall of small intestine | 2.47e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
