Personal tools

FFCP PHASE1:Mm9::chr11:79967573..79967584,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=216991|HGNC=|MCL_coexpression_id=24|UniProt=Q8R2V5,Q3V340|association_with_transcript=-22bp_to_ENSMUST00000021050,ENSMUST00000164168_5end|description=CAGE_peak_2_at_Adap2_5end|id=chr11:79967573..79967584,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,7.16e-08,6;CL:0000677,7.16e-08,6;CL:0000584,7.16e-08,6;CL:0000473,8.10e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.02e-14!59;UBERON:0000160!1.51e-14!43;UBERON:0004119!6.32e-10!130;UBERON:0000925!6.32e-10!130;UBERON:0006595!6.32e-10!130;UBERON:0004923!1.76e-09!24;UBERON:0001007!2.58e-09!128;UBERON:0001555!2.58e-09!128;UBERON:0007026!2.58e-09!128;UBERON:0004921!1.27e-08!126;UBERON:0004185!1.27e-08!126;UBERON:0000344!1.58e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.33e-18,31;UBERON:0004119,9.22e-12,118;UBERON:0000925,9.22e-12,118;UBERON:0006595,9.22e-12,118;UBERON:0005409,1.33e-11,47;UBERON:0000344,1.55e-11,15;UBERON:0001007,2.61e-11,116;UBERON:0001555,2.61e-11,116;UBERON:0007026,2.61e-11,116;UBERON:0004921,3.04e-10,114;UBERON:0001242,6.08e-10,13;UBERON:0001262,6.08e-10,13;UBERON:0004786,6.08e-10,13;UBERON:0004923,1.52e-09,24;UBERON:0005177,1.84e-07,79;UBERON:0009854,3.76e-07,23;UBERON:0009856,3.76e-07,23|phase1_expression=0,6.97950815278722,6.82498859084304,15.4256747766483,15.5277676283368,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0.473193248037357,1.09691546884591,0.42438965179803,1.02051948181284,0.0992909512008853,0,2.3998863419011,2.06468352960453,4.01962374880514,3.01533397311352,2.37018355954478,2.85035129184561,4.78857246543868,1.33038306393183,0,0,0,1.73310971850765,0.332469290716985,0.204169356262369,0.837063261473815,0,0,1.76469446409304,3.41522742479223,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43266719969378,0,0,0,0,0,0,2.2497492932035,2.96659908770092,2.8419204597844,2.09720077362883,1.53687322128622,0.207379224616955,0.135005938331691,0,0,0.662605622854841,0.122490799214954,0,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.0914876436024097,0.52091337055676,0.837548997004143,0.56276261003168,0.30559649555362,0.589257170947335,0.284743361598206,0,0,0.0755715601067855,0.579728977403356,0,0,2.15881276655127,3.24888208723835,3.58421509677868,1.54488862144927,0,0,0,0,0,0,0,0,0,0,1.7127581957859,1.29468941823586,0.890652834388949,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,4.20231445148436,0.722996784599558,0,0.323533699894818,0.883366073841574,0,1.86391761218122,0,0.41889341362691,2.81002760729451,0,0,0.254140454146129,0.299581278809645,0.915001205637253,0,0.347648640384553,0.511430914660661,0.41557608911912,0.162241263067758,0.203678727700633,0.746441823660558,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,0,0,0.204109497453984,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0.467061369468678,0.822799249567402,0,0.56748166682099,0.877199924551994,0.878200461164203,1.47627060636409,0,0.308713837137853,6.93879444265976,4.49565963328025,0,0.696710015581316,0.128867461322093,0.605050573870028,1.33426826306922,1.33157938278791,4.2707615539006,1.31759163779209,2.76468729680296,2.78539060857611,2.72949721966768,5.39291645192533,2.59365659849633,4.58024928485045,0,0,0,1.01825663922657,0.775809948670503,0.98190147846446,1.26473074248515,1.62371162777562,1.8839847340965,1.85095745882701,3.55743152504579,0.166845105716094,0.196558995113203,0.224862112384854,0.811440485554012,1.20588579876208,1.01850340712568,0.863088412352432,0.810676133875177,3.0201755450689,2.87536413054709,4.46569137202204,4.68056509671841,2.52578877947112,2.87035861635059,4.82443521363367,1.10851914099963,0,0.162964976442026,0,0,0,0,1.36593553500459,0.315270288212382,0.44292937929755,1.43509291791738,2.13022309130459,1.72684981865896,1.59113964439663,3.01582567878545,3.26343410291226,0.491764273019036,0,0.160550589987792,0.35163505977661,0,0.504941854408746,0,0,0,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.425820255624806,0.178065603667255,0.162886959353576,1.81467135269789,3.98235415019888,0,0,1.13163047853539,1.47650946440386,1.53717573971964,2.06742634534577,1.81766864738753,2.85197902707777,0.632073515871632,2.10837217149998,6.18813259489121,0,0,0,0,0.177340233642274,0,0.329098041204242,0.608929898229199,0.704015124191131,4.02480934641258,0,0.65954501176592,0.161464426695906,0.180938774784468,0,0.164140899745061,3.20628920292836,0.18542530201051,0.854354403989263,0.619160603889667,0.555583582109135,0.565105371014073,0.820165366326151,1.60144721244566,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.674321731924103,0.578574190077352,0.523511883968059,2.59229946583586,0,0,0,0.496375471371293,0,0.129159823477731,0,0,0.13020438484395,0,0.724752362478018,0.288030006257865,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.350630706544707,0,0.221985953374065,0.538283139656854,0.335769232728157,1.73870634628971,0.563047426353546,0.549454872801795,0,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0.367687016900028,0,0.824140228955577,0,0.758091635291392,0.50695859978048,0.188626341386076,0.280924522409647,0.384150914429216,0.34461281373368,0.476293691283074,0.463537303779422,0.578727661391115,0.824171801606613,0.735994600671987,0,0.354951612318675,0.476872379894642,0.726732083161643,0,0.169229215783353,0.365855945745545,0.789209134313529,0.679020569229309,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,0.619747364743864,0.385813221962283,0,0.233931608445408,0.644613162144895,0.956441660344217,0.441182838239031,0.695603506861264|short_description=p2@Adap2}}
|EntrezGene=216991
|HGNC=
|MCL_coexpression_id=24
|UniProt=Q8R2V5,Q3V340
|association_with_transcript=-22bp_to_ENSMUST00000021050,ENSMUST00000164168_5end
|description=CAGE_peak_2_at_Adap2_5end
|id=chr11:79967573..79967584,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,7.16e-08,6;CL:0000677,7.16e-08,6;CL:0000584,7.16e-08,6;CL:0000473,8.10e-08,7
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.02e-14!59;UBERON:0000160!1.51e-14!43;UBERON:0004119!6.32e-10!130;UBERON:0000925!6.32e-10!130;UBERON:0006595!6.32e-10!130;UBERON:0004923!1.76e-09!24;UBERON:0001007!2.58e-09!128;UBERON:0001555!2.58e-09!128;UBERON:0007026!2.58e-09!128;UBERON:0004921!1.27e-08!126;UBERON:0004185!1.27e-08!126;UBERON:0000344!1.58e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.33e-18,31;UBERON:0004119,9.22e-12,118;UBERON:0000925,9.22e-12,118;UBERON:0006595,9.22e-12,118;UBERON:0005409,1.33e-11,47;UBERON:0000344,1.55e-11,15;UBERON:0001007,2.61e-11,116;UBERON:0001555,2.61e-11,116;UBERON:0007026,2.61e-11,116;UBERON:0004921,3.04e-10,114;UBERON:0001242,6.08e-10,13;UBERON:0001262,6.08e-10,13;UBERON:0004786,6.08e-10,13;UBERON:0004923,1.52e-09,24;UBERON:0005177,1.84e-07,79;UBERON:0009854,3.76e-07,23;UBERON:0009856,3.76e-07,23
|phase1_expression=0,6.97950815278722,6.82498859084304,15.4256747766483,15.5277676283368,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0.473193248037357,1.09691546884591,0.42438965179803,1.02051948181284,0.0992909512008853,0,2.3998863419011,2.06468352960453,4.01962374880514,3.01533397311352,2.37018355954478,2.85035129184561,4.78857246543868,1.33038306393183,0,0,0,1.73310971850765,0.332469290716985,0.204169356262369,0.837063261473815,0,0,1.76469446409304,3.41522742479223,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43266719969378,0,0,0,0,0,0,2.2497492932035,2.96659908770092,2.8419204597844,2.09720077362883,1.53687322128622,0.207379224616955,0.135005938331691,0,0,0.662605622854841,0.122490799214954,0,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.0914876436024097,0.52091337055676,0.837548997004143,0.56276261003168,0.30559649555362,0.589257170947335,0.284743361598206,0,0,0.0755715601067855,0.579728977403356,0,0,2.15881276655127,3.24888208723835,3.58421509677868,1.54488862144927,0,0,0,0,0,0,0,0,0,0,1.7127581957859,1.29468941823586,0.890652834388949,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,4.20231445148436,0.722996784599558,0,0.323533699894818,0.883366073841574,0,1.86391761218122,0,0.41889341362691,2.81002760729451,0,0,0.254140454146129,0.299581278809645,0.915001205637253,0,0.347648640384553,0.511430914660661,0.41557608911912,0.162241263067758,0.203678727700633,0.746441823660558,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,0,0,0.204109497453984,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0.467061369468678,0.822799249567402,0,0.56748166682099,0.877199924551994,0.878200461164203,1.47627060636409,0,0.308713837137853,6.93879444265976,4.49565963328025,0,0.696710015581316,0.128867461322093,0.605050573870028,1.33426826306922,1.33157938278791,4.2707615539006,1.31759163779209,2.76468729680296,2.78539060857611,2.72949721966768,5.39291645192533,2.59365659849633,4.58024928485045,0,0,0,1.01825663922657,0.775809948670503,0.98190147846446,1.26473074248515,1.62371162777562,1.8839847340965,1.85095745882701,3.55743152504579,0.166845105716094,0.196558995113203,0.224862112384854,0.811440485554012,1.20588579876208,1.01850340712568,0.863088412352432,0.810676133875177,3.0201755450689,2.87536413054709,4.46569137202204,4.68056509671841,2.52578877947112,2.87035861635059,4.82443521363367,1.10851914099963,0,0.162964976442026,0,0,0,0,1.36593553500459,0.315270288212382,0.44292937929755,1.43509291791738,2.13022309130459,1.72684981865896,1.59113964439663,3.01582567878545,3.26343410291226,0.491764273019036,0,0.160550589987792,0.35163505977661,0,0.504941854408746,0,0,0,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.425820255624806,0.178065603667255,0.162886959353576,1.81467135269789,3.98235415019888,0,0,1.13163047853539,1.47650946440386,1.53717573971964,2.06742634534577,1.81766864738753,2.85197902707777,0.632073515871632,2.10837217149998,6.18813259489121,0,0,0,0,0.177340233642274,0,0.329098041204242,0.608929898229199,0.704015124191131,4.02480934641258,0,0.65954501176592,0.161464426695906,0.180938774784468,0,0.164140899745061,3.20628920292836,0.18542530201051,0.854354403989263,0.619160603889667,0.555583582109135,0.565105371014073,0.820165366326151,1.60144721244566,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.674321731924103,0.578574190077352,0.523511883968059,2.59229946583586,0,0,0,0.496375471371293,0,0.129159823477731,0,0,0.13020438484395,0,0.724752362478018,0.288030006257865,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.350630706544707,0,0.221985953374065,0.538283139656854,0.335769232728157,1.73870634628971,0.563047426353546,0.549454872801795,0,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0.367687016900028,0,0.824140228955577,0,0.758091635291392,0.50695859978048,0.188626341386076,0.280924522409647,0.384150914429216,0.34461281373368,0.476293691283074,0.463537303779422,0.578727661391115,0.824171801606613,0.735994600671987,0,0.354951612318675,0.476872379894642,0.726732083161643,0,0.169229215783353,0.365855945745545,0.789209134313529,0.679020569229309,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,0.619747364743864,0.385813221962283,0,0.233931608445408,0.644613162144895,0.956441660344217,0.441182838239031,0.695603506861264
|short_description=p2@Adap2
}}

Revision as of 21:07, 12 September 2013

Short description:p2@Adap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Adap2_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: -22bp_to_ENSMUST00000021050, ENSMUST00000164168_5end
EntrezGene:Adap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Adap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I315.43
CD326+ enterocyte, pool2.CNhs13197.11849-124I415.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B92.85
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell7.16e-086
gut absorptive cell7.16e-086
enterocyte7.16e-086
defensive cell8.10e-087

Uber anatomy
Ontology termp-valuen
intestine1.33e-1831
endoderm-derived structure9.22e-12118
endoderm9.22e-12118
presumptive endoderm9.22e-12118
gastrointestinal system1.33e-1147
mucosa1.55e-1115
digestive system2.61e-11116
digestive tract2.61e-11116
primitive gut2.61e-11116
subdivision of digestive tract3.04e-10114
intestinal mucosa6.08e-1013
wall of intestine6.08e-1013
gastrointestinal system mucosa6.08e-1013
organ component layer1.52e-0924
trunk region element1.84e-0779
digestive tract diverticulum3.76e-0723
sac3.76e-0723







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:79967573..79967584,%2B&oldid=2895931"