FFCP PHASE1:Hg19::chr3:125635500..125635514,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=27bp_to_ENST00000485843_5end|description=CAGE_peak_1_at_ENST00000485843_5end|id=chr3:125635500..125635514,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002550;2.71e-19;1!CL:0002363;1.43e-10;2!CL:0000064;2.63e-07;3!CL:0000067;2.63e-07;3!CL:0005012;2.63e-07;3!CL:0002304;2.63e-07;3!CL:0002577;2.63e-07;3!CL:0002592;2.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0002550,2.71e-19,1;CL:0002363,1.43e-10,2;CL:0000008,1.43e-10,2;CL:0002577,2.05e-07,3;CL:0002592,2.32e-07,3;CL:0000064,3.16e-07,3;CL:0000067,3.16e-07,3;CL:0005012,3.16e-07,3;CL:0002304,3.16e-07,3|ontology_enrichment_development_v019=CL:0000008;1.43e-10;2|ontology_enrichment_disease=DOID:14566!2.20e-07!239;DOID:162!6.09e-07!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003566;1.43e-10;2!UBERON:0001777;1.43e-10;2!UBERON:0003498;2.63e-07;3!UBERON:0005985;2.63e-07;3!UBERON:0001778;2.63e-07;3!UBERON:0001621;2.63e-07;3!UBERON:0001775;2.63e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003566,1.43e-10,2;UBERON:0001777,1.43e-10,2;UBERON:0001621,2.32e-07,3;UBERON:0001778,3.16e-07,3;UBERON:0001775,3.16e-07,3|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,0,0,0,0,0,0.443067789167242,0.270803863765016,0,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0.604820229674197,0.267440195783507,0.434473211648397,0,0,0.12786256184353,0,0,0.434539556882471,1.5905718941022,0,0.0945348171640679,1.10864698731282,0.351339142772504,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,1.40592859100278,0.312160076830321,0.570471821544449,0.149448680551801,0.23486899728753,0,0,0.408308342509787,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0.300091096084402,0,0,0,0.337552664482532,0.292311015483596,0,0.0920498986422993,0,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0.860413786167011,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0.100528972411631,0.370353780634118,0.651616610620649,3.11980435583874,0,0,0,0,0,0.380508304469197,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0.179117045405697,0.581267877027924,0,0,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0.266422179016099,0.142977993658148,0,0,0.65147236858747,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0,0.234282829985426,0,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0.391602314925481,0,0,0,0,0.909382714338778,1.66435439510497,0,0,0,0,0,0,0,0,0,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0,0.0920809889358963,0.34444334449382,0.182091168006717,0.393373244878272,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0.183138929636687,0.577566499444116,0,0.650060246036521,0,0.290012154876366,0,0,0,0,0,0.0852266274161009,0.356128142586949,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0.532306030317022,0.869932992075073,0,0.143124886741991,0,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0.117812402345686,0.404364963146632,1.58510321173008,0,0,0,0,0.409499734223957,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.557409525377156,0.28853842595289,0.213425530045242,0,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.935702702041099,0,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0.329607748453519,0.211125408127993,0.19924798825107,0,0.251932747854276,0,0.123084805461069,0,0.269605053441981,0.537063524026827,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0.341380344856499,0.254253650292766,0.236387681767936,0.344743373241465,0.2916046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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=27bp_to_ENST00000485843_5end | |||
|description=CAGE_peak_1_at_ENST00000485843_5end | |||
|id=chr3:125635500..125635514,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002550;2.71e-19;1!CL:0002363;1.43e-10;2!CL:0000064;2.63e-07;3!CL:0000067;2.63e-07;3!CL:0005012;2.63e-07;3!CL:0002304;2.63e-07;3!CL:0002577;2.63e-07;3!CL:0002592;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002550,2.71e-19,1;CL:0002363,1.43e-10,2;CL:0000008,1.43e-10,2;CL:0002577,2.05e-07,3;CL:0002592,2.32e-07,3;CL:0000064,3.16e-07,3;CL:0000067,3.16e-07,3;CL:0005012,3.16e-07,3;CL:0002304,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000008;1.43e-10;2 | |||
|ontology_enrichment_disease=DOID:14566!2.20e-07!239;DOID:162!6.09e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;1.43e-10;2!UBERON:0001777;1.43e-10;2!UBERON:0003498;2.63e-07;3!UBERON:0005985;2.63e-07;3!UBERON:0001778;2.63e-07;3!UBERON:0001621;2.63e-07;3!UBERON:0001775;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,1.43e-10,2;UBERON:0001777,1.43e-10,2;UBERON:0001621,2.32e-07,3;UBERON:0001778,3.16e-07,3;UBERON:0001775,3.16e-07,3 | |||
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| |||
|short_description=p1@ENST00000485843 | |||
}} |
Revision as of 21:18, 12 September 2013
Short description: | p1@ENST00000485843 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000485843_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000485843_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of the conjuctiva | 2.71e-19 | 1 |
keratocyte | 1.43e-10 | 2 |
migratory cranial neural crest cell | 1.43e-10 | 2 |
placental epithelial cell | 2.05e-07 | 3 |
smooth muscle cell of the coronary artery | 2.32e-07 | 3 |
ciliated cell | 3.16e-07 | 3 |
ciliated epithelial cell | 3.16e-07 | 3 |
multi-ciliated epithelial cell | 3.16e-07 | 3 |
non-pigmented ciliary epithelial cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 1.43e-10 | 2 |
substantia propria of cornea | 1.43e-10 | 2 |
coronary artery | 2.32e-07 | 3 |
ciliary epithelium | 3.16e-07 | 3 |
ciliary body | 3.16e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.