FFCP PHASE1:Mm9::chr11:86570954..86570965,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=67300|HGNC=|UniProt=E9Q434,Q68FD5|association_with_transcript=28bp_to_ENSMUST00000100663,NM_001003908,uc007kta.1_5end|description=CAGE_peak_2_at_Cltc_5end|id=chr11:86570954..86570965,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!2.52e-07!10;UBERON:0000411!2.52e-07!10;UBERON:0001950!2.52e-07!10;UBERON:0007023!4.57e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.50e-07,10;UBERON:0000411,2.50e-07,10;UBERON:0001950,2.50e-07,10;UBERON:0007023,4.14e-07,51|phase1_expression=1.12104192973356,8.37540978334467,7.27998783023258,5.14189159221611,4.50806156951712,2.85394762250213,2.56973904655078,0.903863264091034,8.4473233291,12.1713553687437,1.71217968225505,1.91453181588807,0.513602189793617,0.786783621770977,1.66554880907831,3.84703008040669,0.699561878128147,1.57731082679119,1.91960207048034,2.12194825899015,2.12608225377674,3.3758923408301,2.08959831311148,3.19984845586813,4.12936705920906,4.59385571292016,5.1691439539089,4.52489588640367,4.75058548640935,4.53654233567875,3.54768817048488,0.635030673459631,1.23012957516914,0,0.577703239502549,0.498703936075477,0.408338712524738,6.69650609179052,1.5626706890476,5.23523743973798,5.88231488031014,5.46436387966757,3.88408282424923,11.330713617802,12.0638548151222,8.44315059943735,1.56478268869608,0.436050312760893,0.439372365468944,0.972149495371417,0.839918529752175,0,3.18786951509699,4.35217285206807,3.6970317905671,4.88792928468299,5.44413535883638,3.09403255366465,0.809265843438391,2.64495489636016,0.633831403506179,1.35537812827653,2.66788438833342,2.2497492932035,0.988866362566974,3.5524005747305,2.99600110518405,4.2264013585371,1.03689612308478,0.540023753326763,2.3135745748652,1.71390590642282,1.76694832761291,0.857435594504678,0.670918297127655,0.919218786610021,8.8092704799511,4.85211884723713,4.6081959976873,1.45074916503213,0.914876436024097,1.04182674111352,1.95428099300967,5.06486349028512,4.73674568108111,5.00868595305235,2.84743361598206,3.54158947068071,1.36307147999731,1.51143120213571,6.66688324013859,1.72084775396277,1.3599426674155,2.69851595818909,3.89865850468601,3.13618820968135,3.23022166303029,0.681721290312231,2.07828803682295,0.35333957451034,1.40843419776681,2.56652954828636,0,0,1.94841936910093,2.02687892380079,1.51657333504435,2.96878087269556,9.32176381129818,3.41416919849097,2.94925055502431,2.13125834818499,2.53677046981664,3.01445281105245,4.23319345688537,1.63366568728578,7.41584903203122,5.35017620603673,0,3.23533699894818,3.75430581382669,2.42437626567611,9.31958806090611,3.51336956413857,8.16842156572475,8.17462576667492,2.99537811264801,2.39961092397363,2.66847476853436,3.44518470631092,5.49000723382352,1.25654352112864,7.30062144807561,6.90431734791892,5.81806524766768,6.32740925964255,2.64782346010822,4.35424397135326,2.77995034277042,2.52530227063769,2.99277018814219,1.83921683546778,1.44049703844279,1.50704817835715,1.90502197623718,2.69038812598185,1.78033276663485,1.81092359517311,1.07783996466421,2.64748512234947,1.93546236580344,3.06874025398605,2.50242524303038,2.43776516565517,4.32142486456681,1.79130840136644,1.40442637462647,1.28673953557358,1.13665399758237,3.52113813310353,3.28336483973535,3.06105504483725,2.84093682702252,1.57411385397923,2.46827380619805,1.86027155800326,3.48755421819505,3.03589890154641,2.63295759861569,1.80584210487005,2.35099547682982,2.04679982395465,2.41505126820156,3.89198614405078,5.25724871410318,1.3377599609307,7.26921322564356,3.70230793328962,3.83918850963421,2.09013004674395,3.73715637834071,3.02525286935014,3.7804267453628,2.85338439168839,6.64340686162316,2.14108641141214,4.02136334080431,6.56556357735798,3.50935356814416,11.6846523125049,4.97117514711797,3.38540164532424,3.60369011810855,2.28497025219458,2.25415471346161,3.05476991767971,3.29719228184964,4.34842083319975,3.35153646758564,2.80459281161244,3.29697328466887,4.07210640941942,2.37162101669719,4.00428253718626,5.70021085828289,3.14806957338795,4.26006254915856,3.13530307678142,2.29163266603278,3.74004978686054,5.99900339067631,1.92192989231657,5.75072826109418,9.30352369171258,1.5601883655728,2.02063102357689,1.79397413521912,5.30687873499704,3.14080423283228,3.7898282354097,1.95557971730431,1.18821560042632,3.05097322775053,2.01007508930179,1.6663054862021,4.48807390072937,4.72905432318573,3.10050565508285,3.50800491046472,3.11340297959902,4.31712454664739,3.61622646453779,13.5712155545345,10.8781136763742,3.44234991113325,4.69092468718045,3.69266356971921,5.15731421005694,2.29508923527346,2.01976741763498,1.89304931649754,1.56175497718655,3.44677436372478,2.86762557543062,2.45078541490634,3.11384183867716,2.42886421004937,2.92255857911312,3.55759000151871,3.21321316421807,4.5420827266646,2.13678724400706,3.4206261464251,3.79431282836832,1.32745138339963,1.94224508923985,2.11626489875326,2.64047111658257,3.54362271456927,0.922305443831782,3.35956781118687,1.09060118843252,2.13898427030833,0.948110273807448,1.05418608574999,2.06271086496374,2.04263763452273,3.06103859853227,2.06973894052407,2.14337035031592,1.06404140185364,2.85390108163313,3.1264313914403,3.34911444026059,8.68285319835728,4.44847348814022,4.19003956304428,1.97863503529776,8.88054346827481,2.5934557719107,4.77489376012546,2.46211349617592,6.70405924248657,5.00648315428376,5.46786818553129,4.12773735926445,3.1483069652851,4.33247451110789,7.79157098009843,5.0331198105435,4.9293744698218,6.43776680688827,5.11339903076368,1.90934123603023,3.00519193902079,2.23651413839534,2.59212817972323,1.88179466413022,3.05707589244649,4.04593039154462,3.55409859618945,3.92633912976044,3.49960427887841,3.72803587852155,1.69107881605257,3.28936401296753,2.81279433777066,2.52786544847262,2.45403664607689,1.520605129417,1.87771581833206,1.95306577265925,3.14578033277133,1.44950472495604,1.15212002503146,3.47612232690996,2.22997736819181,2.05421914329655,2.46849563657811,1.79026695667481,1.58945083825012,0.961563596159751,1.9199638532695,2.42319479875554,2.13379058634,1.41156659191577,2.33898913775406,1.82802499116626,2.33753804363138,2.26730383615211,6.65957860122194,5.02397597013064,7.38692312001945,3.28422309854724,6.00583921443782,5.86085197655248,3.64426244434412,1.50471631210609,7.34177395402186,10.5874804396651,7.44764167471216,8.07709957015332,7.53590771747707,7.55393897389701,7.42524750254986,9.00642406448441,12.2348450425735,10.8729665467882,2.28332164685189,4.78829848081237,1.53660245178721,3.16038732188782,2.72497111416377,2.20612210140017,2.00022055021454,1.64828045791115,2.56735367673452,3.28506375292937,0.760437899670719,1.50901073108861,2.1537546718073,1.92075457214608,1.49332219284595,0.476293691283074,2.31768651889711,1.73618298417335,1.64834360321323,1.61918812147837,1.71434626192708,1.59728225543404,2.38436189947321,2.32554266611726,1.69396884747595,2.03075058940024,1.64635175585495,2.10455769150274,1.49384525230448,1.68342681497322,2.49133538060766,1.97008964751127,1.22769312950907,1.39443157067369,3.08650577569826,2.99772693525535,2.8071793013449,5.58664740525576,5.54736162999646,3.52946270591225,3.47801753430632|short_description=p2@Cltc}} | ||
|EntrezGene=67300 | |||
|HGNC= | |||
|UniProt=E9Q434,Q68FD5 | |||
|association_with_transcript=28bp_to_ENSMUST00000100663,NM_001003908,uc007kta.1_5end | |||
|description=CAGE_peak_2_at_Cltc_5end | |||
|id=chr11:86570954..86570965,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.52e-07!10;UBERON:0000411!2.52e-07!10;UBERON:0001950!2.52e-07!10;UBERON:0007023!4.57e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.50e-07,10;UBERON:0000411,2.50e-07,10;UBERON:0001950,2.50e-07,10;UBERON:0007023,4.14e-07,51 | |||
|phase1_expression=1.12104192973356,8.37540978334467,7.27998783023258,5.14189159221611,4.50806156951712,2.85394762250213,2.56973904655078,0.903863264091034,8.4473233291,12.1713553687437,1.71217968225505,1.91453181588807,0.513602189793617,0.786783621770977,1.66554880907831,3.84703008040669,0.699561878128147,1.57731082679119,1.91960207048034,2.12194825899015,2.12608225377674,3.3758923408301,2.08959831311148,3.19984845586813,4.12936705920906,4.59385571292016,5.1691439539089,4.52489588640367,4.75058548640935,4.53654233567875,3.54768817048488,0.635030673459631,1.23012957516914,0,0.577703239502549,0.498703936075477,0.408338712524738,6.69650609179052,1.5626706890476,5.23523743973798,5.88231488031014,5.46436387966757,3.88408282424923,11.330713617802,12.0638548151222,8.44315059943735,1.56478268869608,0.436050312760893,0.439372365468944,0.972149495371417,0.839918529752175,0,3.18786951509699,4.35217285206807,3.6970317905671,4.88792928468299,5.44413535883638,3.09403255366465,0.809265843438391,2.64495489636016,0.633831403506179,1.35537812827653,2.66788438833342,2.2497492932035,0.988866362566974,3.5524005747305,2.99600110518405,4.2264013585371,1.03689612308478,0.540023753326763,2.3135745748652,1.71390590642282,1.76694832761291,0.857435594504678,0.670918297127655,0.919218786610021,8.8092704799511,4.85211884723713,4.6081959976873,1.45074916503213,0.914876436024097,1.04182674111352,1.95428099300967,5.06486349028512,4.73674568108111,5.00868595305235,2.84743361598206,3.54158947068071,1.36307147999731,1.51143120213571,6.66688324013859,1.72084775396277,1.3599426674155,2.69851595818909,3.89865850468601,3.13618820968135,3.23022166303029,0.681721290312231,2.07828803682295,0.35333957451034,1.40843419776681,2.56652954828636,0,0,1.94841936910093,2.02687892380079,1.51657333504435,2.96878087269556,9.32176381129818,3.41416919849097,2.94925055502431,2.13125834818499,2.53677046981664,3.01445281105245,4.23319345688537,1.63366568728578,7.41584903203122,5.35017620603673,0,3.23533699894818,3.75430581382669,2.42437626567611,9.31958806090611,3.51336956413857,8.16842156572475,8.17462576667492,2.99537811264801,2.39961092397363,2.66847476853436,3.44518470631092,5.49000723382352,1.25654352112864,7.30062144807561,6.90431734791892,5.81806524766768,6.32740925964255,2.64782346010822,4.35424397135326,2.77995034277042,2.52530227063769,2.99277018814219,1.83921683546778,1.44049703844279,1.50704817835715,1.90502197623718,2.69038812598185,1.78033276663485,1.81092359517311,1.07783996466421,2.64748512234947,1.93546236580344,3.06874025398605,2.50242524303038,2.43776516565517,4.32142486456681,1.79130840136644,1.40442637462647,1.28673953557358,1.13665399758237,3.52113813310353,3.28336483973535,3.06105504483725,2.84093682702252,1.57411385397923,2.46827380619805,1.86027155800326,3.48755421819505,3.03589890154641,2.63295759861569,1.80584210487005,2.35099547682982,2.04679982395465,2.41505126820156,3.89198614405078,5.25724871410318,1.3377599609307,7.26921322564356,3.70230793328962,3.83918850963421,2.09013004674395,3.73715637834071,3.02525286935014,3.7804267453628,2.85338439168839,6.64340686162316,2.14108641141214,4.02136334080431,6.56556357735798,3.50935356814416,11.6846523125049,4.97117514711797,3.38540164532424,3.60369011810855,2.28497025219458,2.25415471346161,3.05476991767971,3.29719228184964,4.34842083319975,3.35153646758564,2.80459281161244,3.29697328466887,4.07210640941942,2.37162101669719,4.00428253718626,5.70021085828289,3.14806957338795,4.26006254915856,3.13530307678142,2.29163266603278,3.74004978686054,5.99900339067631,1.92192989231657,5.75072826109418,9.30352369171258,1.5601883655728,2.02063102357689,1.79397413521912,5.30687873499704,3.14080423283228,3.7898282354097,1.95557971730431,1.18821560042632,3.05097322775053,2.01007508930179,1.6663054862021,4.48807390072937,4.72905432318573,3.10050565508285,3.50800491046472,3.11340297959902,4.31712454664739,3.61622646453779,13.5712155545345,10.8781136763742,3.44234991113325,4.69092468718045,3.69266356971921,5.15731421005694,2.29508923527346,2.01976741763498,1.89304931649754,1.56175497718655,3.44677436372478,2.86762557543062,2.45078541490634,3.11384183867716,2.42886421004937,2.92255857911312,3.55759000151871,3.21321316421807,4.5420827266646,2.13678724400706,3.4206261464251,3.79431282836832,1.32745138339963,1.94224508923985,2.11626489875326,2.64047111658257,3.54362271456927,0.922305443831782,3.35956781118687,1.09060118843252,2.13898427030833,0.948110273807448,1.05418608574999,2.06271086496374,2.04263763452273,3.06103859853227,2.06973894052407,2.14337035031592,1.06404140185364,2.85390108163313,3.1264313914403,3.34911444026059,8.68285319835728,4.44847348814022,4.19003956304428,1.97863503529776,8.88054346827481,2.5934557719107,4.77489376012546,2.46211349617592,6.70405924248657,5.00648315428376,5.46786818553129,4.12773735926445,3.1483069652851,4.33247451110789,7.79157098009843,5.0331198105435,4.9293744698218,6.43776680688827,5.11339903076368,1.90934123603023,3.00519193902079,2.23651413839534,2.59212817972323,1.88179466413022,3.05707589244649,4.04593039154462,3.55409859618945,3.92633912976044,3.49960427887841,3.72803587852155,1.69107881605257,3.28936401296753,2.81279433777066,2.52786544847262,2.45403664607689,1.520605129417,1.87771581833206,1.95306577265925,3.14578033277133,1.44950472495604,1.15212002503146,3.47612232690996,2.22997736819181,2.05421914329655,2.46849563657811,1.79026695667481,1.58945083825012,0.961563596159751,1.9199638532695,2.42319479875554,2.13379058634,1.41156659191577,2.33898913775406,1.82802499116626,2.33753804363138,2.26730383615211,6.65957860122194,5.02397597013064,7.38692312001945,3.28422309854724,6.00583921443782,5.86085197655248,3.64426244434412,1.50471631210609,7.34177395402186,10.5874804396651,7.44764167471216,8.07709957015332,7.53590771747707,7.55393897389701,7.42524750254986,9.00642406448441,12.2348450425735,10.8729665467882,2.28332164685189,4.78829848081237,1.53660245178721,3.16038732188782,2.72497111416377,2.20612210140017,2.00022055021454,1.64828045791115,2.56735367673452,3.28506375292937,0.760437899670719,1.50901073108861,2.1537546718073,1.92075457214608,1.49332219284595,0.476293691283074,2.31768651889711,1.73618298417335,1.64834360321323,1.61918812147837,1.71434626192708,1.59728225543404,2.38436189947321,2.32554266611726,1.69396884747595,2.03075058940024,1.64635175585495,2.10455769150274,1.49384525230448,1.68342681497322,2.49133538060766,1.97008964751127,1.22769312950907,1.39443157067369,3.08650577569826,2.99772693525535,2.8071793013449,5.58664740525576,5.54736162999646,3.52946270591225,3.47801753430632 | |||
|short_description=p2@Cltc | |||
}} | |||
Revision as of 21:19, 12 September 2013
| Short description: | p2@Cltc |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Cltc_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 28bp_to_ENSMUST00000100663, NM_001003908, uc007kta.1_5end |
| EntrezGene: | Cltc |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 2.50e-07 | 10 |
| visual cortex | 2.50e-07 | 10 |
| neocortex | 2.50e-07 | 10 |
| adult organism | 4.14e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
