FFCP PHASE1:Mm9::chr11:94183212..94183223,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67684|HGNC=|UniProt=Q5SUF2|association_with_transcript=1bp_to_NM_026313,uc007kyh.1,uc007kyj.1_5end|description=CAGE_peak_3_at_Luc7l3_5end|id=chr11:94183212..94183223,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!9.02e-10!94;UBERON:0007811!5.44e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.59e-07,64;UBERON:0003075,8.59e-07,64;UBERON:0007284,8.59e-07,64|phase1_expression=3.68342348341026,0.348975407639361,1.36499771816861,1.20985684522732,0,1.51091344720701,1.86890112476421,1.16210991097419,7.60259099619,8.66038747391376,2.56826952338257,3.90883579077148,1.54080656938085,0.961624426608971,2.99798785634096,2.63217847606774,2.09868563438444,2.68142840554502,2.74228867211478,2.12194825899015,4.5072943780067,5.26242041364692,3.13439746966722,0.95995453676044,0.91763712426868,1.14846392823004,1.29228598847722,1.07735616342945,1.33016393619462,0.504060259519861,0.665191531965914,1.90509202037889,1.23012957516914,0,1.44425809875637,0.498703936075477,0.816677425049476,0.837063261473815,0.7813353445238,1.0470474879476,0,0,0.485510353031154,1.6366586336825,1.72340783073175,5.13930906052708,0,0.436050312760893,0.219686182734472,0.972149495371417,0.279972843250725,0,5.03347818173209,1.45072428402269,2.35265659399725,1.02903774414379,0.85960031981627,1.03134418455488,1.21389876515759,1.5869729378161,1.26766280701236,0,0.889294796111139,0.449949858640699,0,0,0,0,5.28817022773236,1.62007125998029,2.10324961351382,1.42825492201902,2.42955395046775,3.91970557487853,2.49198224647415,4.5960939330501,9.91042928994498,3.70293280447044,4.76180253094355,1.97829431595291,2.28719109006024,2.08365348222704,1.3959149950069,3.93933827022176,5.19514042441154,5.30331453852602,6.69146899755784,4.10078780815661,1.81742863999642,1.43585964202892,2.31891590961342,0,0,1.61910957491345,0.649776417447669,2.24013443548668,2.80888840263504,2.04516387093669,1.29893002301434,1.06001872353102,3.66192891419369,1.28326477414318,0,14.2213340630666,1.5154372870785,0.760079596425296,1.01104889002957,2.16949371466214,9.06282592765101,2.22663208597237,3.12273588179045,1.52232739156071,2.7673859670727,3.01445281105245,3.88042733547826,0.628332956648377,3.46072954828123,2.16899035379867,1.76922110389975,3.07357014900077,4.63767188766826,3.87900202508178,0,5.27005434620785,6.28340120440365,1.27728527604296,1.43778149407104,4.19931911695385,2.28726408731516,5.69204429738326,6.8625090422794,5.52879149296603,5.9100268865374,10.7400492078739,4.36354893575076,4.38051410282946,4.48093200941392,2.86136032403214,5.05445516867349,3.36706969418358,6.63614259109789,5.74755261083682,5.94205028357652,8.13806016312861,12.3826428455417,12.2989171473456,8.99536555773397,9.05461797586555,4.52692785158969,9.45530400839096,8.2697028357056,3.28793598641362,5.00485048606076,5.92028683087683,3.90986059175093,7.16523360546575,5.61770549850588,4.37491442095016,2.84163499395593,4.76389276831654,5.62862543954631,4.50155153652537,6.62885259638589,4.9191057936851,2.93107514486019,4.18561100550734,2.68273401399619,5.13767506415546,3.94943639792353,3.447516745661,3.64809642956351,2.92399974850665,3.51280184465681,1.8788898626452,8.20130799400096,9.8788427884113,0.991256348951394,0,5.54549451391608,6.96710015581316,5.15469845288373,4.43703754171354,3.55804870151792,3.99473814836374,0.474529061544512,1.15289268306808,2.26201687920243,2.18852119245266,2.14460495831032,2.69645822596266,1.29682829924817,0.597423819763102,1.51734320762465,5.36968009265725,3.38123207019241,5.49858585182348,4.46090720485539,6.24208797023835,3.41477300470989,1.77132177575523,1.8839847340965,2.46794327843601,1.1858105083486,4.17112764290235,3.34150291692445,3.37293168577281,3.44862206360455,1.68824011826692,2.29163266603278,1.72617682470486,2.59416362840057,4.11842119782122,7.18841032636773,1.86070473834252,2.18426371180192,2.02063102357689,2.15276896226295,0.482443521363367,3.69506380333209,3.97931964718018,5.37784422258685,3.56464680127895,4.92849521405854,6.19773152534718,3.57065461329021,4.87834119644497,5.04432461139811,3.5434350343804,5.26200736569707,3.27726629431476,4.14443956478149,2.74833211304872,1.50791283939272,0,0.491764273019036,2.48343071674259,4.65596710964597,7.2671245687166,1.63934945376675,1.76729649043061,7.88770548540642,6.24701990874622,8.18608911384636,6.93009514062401,6.90675889655422,5.37845408498782,5.26253912177363,7.59865230569411,8.30104333687699,10.2822821254978,4.11626247103979,3.5613120733451,3.90928702448583,4.45419332025846,2.65490276679926,4.37005145078967,0.906970670894253,2.45186603682668,1.47650946440386,3.3817866273832,3.6179961043551,3.99887102425256,1.78248689192361,2.21225730555071,2.10837217149998,2.06271086496374,3.74483566329167,5.04171063287669,2.32845630808958,3.64372959553707,6.0295679438373,4.63758925765383,4.60737257685939,0.913394847343798,2.11204537257339,2.75381692122966,2.64634077665954,7.58476763530808,4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| ||
|EntrezGene=67684 | |||
|HGNC= | |||
|UniProt=Q5SUF2 | |||
|association_with_transcript=1bp_to_NM_026313,uc007kyh.1,uc007kyj.1_5end | |||
|description=CAGE_peak_3_at_Luc7l3_5end | |||
|id=chr11:94183212..94183223,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!9.02e-10!94;UBERON:0007811!5.44e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.59e-07,64;UBERON:0003075,8.59e-07,64;UBERON:0007284,8.59e-07,64 | |||
|phase1_expression=3.68342348341026,0.348975407639361,1.36499771816861,1.20985684522732,0,1.51091344720701,1.86890112476421,1.16210991097419,7.60259099619,8.66038747391376,2.56826952338257,3.90883579077148,1.54080656938085,0.961624426608971,2.99798785634096,2.63217847606774,2.09868563438444,2.68142840554502,2.74228867211478,2.12194825899015,4.5072943780067,5.26242041364692,3.13439746966722,0.95995453676044,0.91763712426868,1.14846392823004,1.29228598847722,1.07735616342945,1.33016393619462,0.504060259519861,0.665191531965914,1.90509202037889,1.23012957516914,0,1.44425809875637,0.498703936075477,0.816677425049476,0.837063261473815,0.7813353445238,1.0470474879476,0,0,0.485510353031154,1.6366586336825,1.72340783073175,5.13930906052708,0,0.436050312760893,0.219686182734472,0.972149495371417,0.279972843250725,0,5.03347818173209,1.45072428402269,2.35265659399725,1.02903774414379,0.85960031981627,1.03134418455488,1.21389876515759,1.5869729378161,1.26766280701236,0,0.889294796111139,0.449949858640699,0,0,0,0,5.28817022773236,1.62007125998029,2.10324961351382,1.42825492201902,2.42955395046775,3.91970557487853,2.49198224647415,4.5960939330501,9.91042928994498,3.70293280447044,4.76180253094355,1.97829431595291,2.28719109006024,2.08365348222704,1.3959149950069,3.93933827022176,5.19514042441154,5.30331453852602,6.69146899755784,4.10078780815661,1.81742863999642,1.43585964202892,2.31891590961342,0,0,1.61910957491345,0.649776417447669,2.24013443548668,2.80888840263504,2.04516387093669,1.29893002301434,1.06001872353102,3.66192891419369,1.28326477414318,0,14.2213340630666,1.5154372870785,0.760079596425296,1.01104889002957,2.16949371466214,9.06282592765101,2.22663208597237,3.12273588179045,1.52232739156071,2.7673859670727,3.01445281105245,3.88042733547826,0.628332956648377,3.46072954828123,2.16899035379867,1.76922110389975,3.07357014900077,4.63767188766826,3.87900202508178,0,5.27005434620785,6.28340120440365,1.27728527604296,1.43778149407104,4.19931911695385,2.28726408731516,5.69204429738326,6.8625090422794,5.52879149296603,5.9100268865374,10.7400492078739,4.36354893575076,4.38051410282946,4.48093200941392,2.86136032403214,5.05445516867349,3.36706969418358,6.63614259109789,5.74755261083682,5.94205028357652,8.13806016312861,12.3826428455417,12.2989171473456,8.99536555773397,9.05461797586555,4.52692785158969,9.45530400839096,8.2697028357056,3.28793598641362,5.00485048606076,5.92028683087683,3.90986059175093,7.16523360546575,5.61770549850588,4.37491442095016,2.84163499395593,4.76389276831654,5.62862543954631,4.50155153652537,6.62885259638589,4.9191057936851,2.93107514486019,4.18561100550734,2.68273401399619,5.13767506415546,3.94943639792353,3.447516745661,3.64809642956351,2.92399974850665,3.51280184465681,1.8788898626452,8.20130799400096,9.8788427884113,0.991256348951394,0,5.54549451391608,6.96710015581316,5.15469845288373,4.43703754171354,3.55804870151792,3.99473814836374,0.474529061544512,1.15289268306808,2.26201687920243,2.18852119245266,2.14460495831032,2.69645822596266,1.29682829924817,0.597423819763102,1.51734320762465,5.36968009265725,3.38123207019241,5.49858585182348,4.46090720485539,6.24208797023835,3.41477300470989,1.77132177575523,1.8839847340965,2.46794327843601,1.1858105083486,4.17112764290235,3.34150291692445,3.37293168577281,3.44862206360455,1.68824011826692,2.29163266603278,1.72617682470486,2.59416362840057,4.11842119782122,7.18841032636773,1.86070473834252,2.18426371180192,2.02063102357689,2.15276896226295,0.482443521363367,3.69506380333209,3.97931964718018,5.37784422258685,3.56464680127895,4.92849521405854,6.19773152534718,3.57065461329021,4.87834119644497,5.04432461139811,3.5434350343804,5.26200736569707,3.27726629431476,4.14443956478149,2.74833211304872,1.50791283939272,0,0.491764273019036,2.48343071674259,4.65596710964597,7.2671245687166,1.63934945376675,1.76729649043061,7.88770548540642,6.24701990874622,8.18608911384636,6.93009514062401,6.90675889655422,5.37845408498782,5.26253912177363,7.59865230569411,8.30104333687699,10.2822821254978,4.11626247103979,3.5613120733451,3.90928702448583,4.45419332025846,2.65490276679926,4.37005145078967,0.906970670894253,2.45186603682668,1.47650946440386,3.3817866273832,3.6179961043551,3.99887102425256,1.78248689192361,2.21225730555071,2.10837217149998,2.06271086496374,3.74483566329167,5.04171063287669,2.32845630808958,3.64372959553707,6.0295679438373,4.63758925765383,4.60737257685939,0.913394847343798,2.11204537257339,2.75381692122966,2.64634077665954,7.58476763530808,4.52100394748536,3.25689794612042,3.10368094408155,1.80554989719567,1.45740418314925,3.8939313422207,2.39219233116994,2.27025554759545,2.96311243791539,4.1441060541032,4.10082683163076,4.11800711771741,3.22959016988325,2.93898049879682,1.79659965945751,0,8.22473583310952,5.48962561242491,3.56417624711944,5.85447228840512,3.49380101993884,3.64133735239016,3.71940550764012,0.785267825952089,1.16653475962614,0.621339313086926,5.07323644815771,7.027277664067,3.47462829959905,1.94451188344048,2.71235629303235,4.89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| |||
|short_description=p3@Luc7l3 | |||
}} | |||
Revision as of 21:30, 12 September 2013
| Short description: | p3@Luc7l3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Luc7l3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 1bp_to_NM_026313, uc007kyh.1, uc007kyj.1_5end |
| EntrezGene: | Luc7l3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 8.59e-07 | 64 |
| neural plate | 8.59e-07 | 64 |
| presumptive neural plate | 8.59e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
