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FFCP PHASE1:Mm9::chr11:98821749..98821799,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=19401|HGNC=|UniProt=P11416|association_with_transcript=0bp_to_NM_001176528,uc007lhz.2_5end|description=CAGE_peak_2_at_Rara_5end|id=chr11:98821749..98821799,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!6.79e-07!14;UBERON:0000117!6.79e-07!14;UBERON:0000171!6.79e-07!14;UBERON:0000170!6.79e-07!14;UBERON:0005597!6.79e-07!14;UBERON:0000118!6.79e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.68e-07,14;UBERON:0000117,6.68e-07,14;UBERON:0000171,6.68e-07,14;UBERON:0000170,6.68e-07,14;UBERON:0005597,6.68e-07,14;UBERON:0000118,6.68e-07,14|phase1_expression=5.76535849577258,2.44282785347553,5.91499011206397,3.0246421130683,8.01433167914156,3.02182689441402,4.20502753071946,1.67860320474049,45.3339685328367,47.9832278960087,0.856089841127525,0.558405112967355,0.684802919724823,0.524522414513984,0.333109761815663,1.01237633694913,0,1.26184866143295,1.50825876966313,1.69755860719212,5.44277056966847,0.0992909512008853,0,1.11994695955385,2.98232065387321,5.7423196411502,2.15380998079537,1.50829862880122,5.13063232532209,5.29263272495855,1.55211357458713,0,1.84519436275371,0,0.577703239502549,3.65716219788683,3.47087905646027,25.1118978442145,21.8773896466664,16.2292360631877,31.1762688656438,34.1522742479223,24.7610280045888,4.90997590104751,3.14268486780495,2.75320128242522,14.0830441982647,1.74420125104357,6.15121311656521,4.6663175777828,3.63964696225943,4.31257693094915,0.335565212115473,3.62681071005672,2.35265659399725,6.94600477297057,7.44986943840768,7.21940929188419,2.42779753031517,1.05798195854407,1.26766280701236,6.77689064138264,7.11435836888911,2.2497492932035,1.97773272513395,0,4.49400165777607,5.76327457982332,1.76272340924412,1.35005938331691,1.26194976810829,1.99955689082663,3.75476519617743,6.85948475603743,10.4471563409878,6.43453150627015,1.10115880999389,0.383062014255563,0,1.18697658957174,1.28082701043374,0,0.558365998002762,0,0.61119299110724,3.83017161115768,3.41692033917847,5.40558392893372,0.984440513331393,3.17400552448499,5.50742528533188,9.46466264679525,8.15965600449301,3.77792234146472,3.89865850468601,2.68816132258401,4.0728881838208,3.2381761289831,5.71529210126311,2.47337702157238,6.19711047017394,7.69958864485907,5.09610479413291,7.11066703153331,1.08245520505607,1.77351905832569,2.02209778005913,5.36664234679582,2.33044095282455,4.30482203287992,6.41895709034703,8.52503339273995,6.22661842591358,4.52167921657868,8.11362079236363,5.02666365318702,16.5620628382031,1.59059292611903,7.07688441559899,5.98537344805414,4.63767188766826,1.45462575940567,1.86391761218122,0.585561594023094,1.04723353406728,5.8755122697976,2.03685711660064,2.39961092397363,1.14363204365758,0.449371918214468,0.457500602818626,5.27748278874031,1.21677024134594,1.27857728665165,1.0389402227978,1.1356888414743,11.6096874789361,3.6078021476927,2.0217820674694,2.73574412652416,4.55421550369463,5.0578462975364,5.40186389416048,7.53524089178575,9.93332887609387,8.58361925908494,5.80950692270319,3.10444044886819,8.83828771024653,6.61871280587367,4.92663147659057,4.60311038097907,3.61461423993277,7.3132954969655,7.20237477427802,10.1507476077432,0,0.772043721344145,0.852490498186778,4.97101854085205,4.45599513964083,4.8616756594474,3.55117103377815,5.3126342571799,4.9365476123961,6.27841650826101,6.70683503499048,6.18856314545998,4.11399624783701,3.447516745661,3.4859588104718,3.21639972335731,2.63460138349261,3.89198614405078,2.52347938276953,1.3377599609307,3.63460661282178,3.43785736662608,7.25180051819795,8.82499353069666,7.98978260196979,6.05050573870028,5.33707305227689,7.03834816616469,3.32170343081158,6.91735609840846,5.7807098024062,5.17286827306992,6.04388670069272,8.98819408654222,5.40345124686736,3.38540164532424,5.50036912763937,5.36968009265725,5.63538678365402,4.68398054044223,5.43066964069352,6.87331034925122,6.82954600941979,3.69025369949005,2.04098346193787,1.48076596706161,5.63259991465583,3.83743743147016,2.35870794135844,1.34917267430912,2.23146133527353,3.37648023653384,2.03700681425136,2.5892652370573,1.62135226775035,1.37280706594041,17.2521847832825,4.46569137202204,3.43241440426017,7.57736633841335,3.94674309748207,3.37710464954357,14.2259956428286,6.82169082373745,5.86673915191293,7.29903868833309,5.39787571063555,14.2380318825543,15.4728366575909,22.6355031515047,16.7093252752562,16.6098517236581,19.4534817762134,9.34020893879707,13.4694285855399,14.3202567995696,0,0.54390568381871,0.983528546038072,1.93155722413313,0.160550589987792,0.35163505977661,6.39346286969034,1.51482556322624,20.5080342620567,12.8844785617891,21.7577631710127,13.6212214832955,16.0415045339324,11.6061377623421,18.2164815753702,16.0740721851222,15.0209355619679,1.28528526568723,7.09700426041343,11.7523298420388,13.3567306669932,7.25868541079156,0,6.31229654002952,4.83717691143602,5.28094223316515,6.79194353625777,5.84126781093462,9.04499026088774,7.99774204850512,5.34746067577082,2.21225730555071,1.05418608574999,1.03135543248187,1.70219802876894,2.70091641046965,6.07985813778946,6.85878512101095,6.91626911204867,6.59964625127661,6.08831376227848,7.61162372786498,3.75474732901937,3.38931313382112,2.42581237860458,2.63818004706368,3.87514624070173,5.36785031860587,3.10368094408155,2.29797259643086,5.82961673259701,0.741701208042039,3.93003025835061,15.0662413613152,9.07453184111587,1.88368457004691,1.36694227721025,1.37266903923914,7.13909405974192,4.89830083132803,6.49539876880792,11.4560474161814,11.8625997592926,8.3360981522008,8.3164112432787,8.36353184057875,8.51613998610093,6.87808166562586,6.03370226794952,6.28214260761671,6.09190374471426,0.621339313086926,3.94585057078933,13.4564891439581,12.2439282938252,11.8615224889869,14.9825395234168,10.3063236549375,23.8235194450881,19.4004533417486,10.3810750981454,4.59009829569411,4.32045009386798,6.00421129193539,4.05450430580328,4.31386020092274,3.24802057444488,6.80301443536429,8.94066096515692,6.61074972359829,8.86137163047463,8.58214824559255,8.30654192539498,8.97353047717881,8.47883562435846,7.79315917286669,9.23327527234395,3.62768613784338,5.10567692760349,3.76798197759798,4.02923079273788,3.86379188064381,5.44279178808428,12.0880072016395,3.00115730710692,3.51100472824754,0,0.460325236507177,2.29158205375759,0.859265911718438,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,10.2749474108335,6.3843979744165,3.75613932659095,5.34834777550247,5.03071590307158,4.22840069435032,5.33392146723877,5.97501665992793,6.09746498224449,6.57012750585873,4.81610669791456,4.71565853465191,7.21039607518095,5.8262888688431,7.52404643318534,3.33405583898152,6.2577536010222,5.78727661391115,6.1812885120496,5.7407578852415,7.20025430009372,3.19456451086807,4.29185141905178,3.77900683244054,4.04670335785922,5.24610568928394,5.67076715905595,5.78753365163254,5.02475221229689,3.36685362994643,5.81311588808453,5.51625101303155,2.45538625901814,3.56354734727722,4.82266527452853,8.24374907195222,6.08222181958062,5.80151845930405,5.54736162999646,6.61774257358547,4.86922454802885|short_description=p2@Rara}}
|EntrezGene=19401
|HGNC=
|UniProt=P11416
|association_with_transcript=0bp_to_NM_001176528,uc007lhz.2_5end
|description=CAGE_peak_2_at_Rara_5end
|id=chr11:98821749..98821799,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!6.79e-07!14;UBERON:0000117!6.79e-07!14;UBERON:0000171!6.79e-07!14;UBERON:0000170!6.79e-07!14;UBERON:0005597!6.79e-07!14;UBERON:0000118!6.79e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.68e-07,14;UBERON:0000117,6.68e-07,14;UBERON:0000171,6.68e-07,14;UBERON:0000170,6.68e-07,14;UBERON:0005597,6.68e-07,14;UBERON:0000118,6.68e-07,14
|phase1_expression=5.76535849577258,2.44282785347553,5.91499011206397,3.0246421130683,8.01433167914156,3.02182689441402,4.20502753071946,1.67860320474049,45.3339685328367,47.9832278960087,0.856089841127525,0.558405112967355,0.684802919724823,0.524522414513984,0.333109761815663,1.01237633694913,0,1.26184866143295,1.50825876966313,1.69755860719212,5.44277056966847,0.0992909512008853,0,1.11994695955385,2.98232065387321,5.7423196411502,2.15380998079537,1.50829862880122,5.13063232532209,5.29263272495855,1.55211357458713,0,1.84519436275371,0,0.577703239502549,3.65716219788683,3.47087905646027,25.1118978442145,21.8773896466664,16.2292360631877,31.1762688656438,34.1522742479223,24.7610280045888,4.90997590104751,3.14268486780495,2.75320128242522,14.0830441982647,1.74420125104357,6.15121311656521,4.6663175777828,3.63964696225943,4.31257693094915,0.335565212115473,3.62681071005672,2.35265659399725,6.94600477297057,7.44986943840768,7.21940929188419,2.42779753031517,1.05798195854407,1.26766280701236,6.77689064138264,7.11435836888911,2.2497492932035,1.97773272513395,0,4.49400165777607,5.76327457982332,1.76272340924412,1.35005938331691,1.26194976810829,1.99955689082663,3.75476519617743,6.85948475603743,10.4471563409878,6.43453150627015,1.10115880999389,0.383062014255563,0,1.18697658957174,1.28082701043374,0,0.558365998002762,0,0.61119299110724,3.83017161115768,3.41692033917847,5.40558392893372,0.984440513331393,3.17400552448499,5.50742528533188,9.46466264679525,8.15965600449301,3.77792234146472,3.89865850468601,2.68816132258401,4.0728881838208,3.2381761289831,5.71529210126311,2.47337702157238,6.19711047017394,7.69958864485907,5.09610479413291,7.11066703153331,1.08245520505607,1.77351905832569,2.02209778005913,5.36664234679582,2.33044095282455,4.30482203287992,6.41895709034703,8.52503339273995,6.22661842591358,4.52167921657868,8.11362079236363,5.02666365318702,16.5620628382031,1.59059292611903,7.07688441559899,5.98537344805414,4.63767188766826,1.45462575940567,1.86391761218122,0.585561594023094,1.04723353406728,5.8755122697976,2.03685711660064,2.39961092397363,1.14363204365758,0.449371918214468,0.457500602818626,5.27748278874031,1.21677024134594,1.27857728665165,1.0389402227978,1.1356888414743,11.6096874789361,3.6078021476927,2.0217820674694,2.73574412652416,4.55421550369463,5.0578462975364,5.40186389416048,7.53524089178575,9.93332887609387,8.58361925908494,5.80950692270319,3.10444044886819,8.83828771024653,6.61871280587367,4.92663147659057,4.60311038097907,3.61461423993277,7.3132954969655,7.20237477427802,10.1507476077432,0,0.772043721344145,0.852490498186778,4.97101854085205,4.45599513964083,4.8616756594474,3.55117103377815,5.3126342571799,4.9365476123961,6.27841650826101,6.70683503499048,6.18856314545998,4.11399624783701,3.447516745661,3.4859588104718,3.21639972335731,2.63460138349261,3.89198614405078,2.52347938276953,1.3377599609307,3.63460661282178,3.43785736662608,7.25180051819795,8.82499353069666,7.98978260196979,6.05050573870028,5.33707305227689,7.03834816616469,3.32170343081158,6.91735609840846,5.7807098024062,5.17286827306992,6.04388670069272,8.98819408654222,5.40345124686736,3.38540164532424,5.50036912763937,5.36968009265725,5.63538678365402,4.68398054044223,5.43066964069352,6.87331034925122,6.82954600941979,3.69025369949005,2.04098346193787,1.48076596706161,5.63259991465583,3.83743743147016,2.35870794135844,1.34917267430912,2.23146133527353,3.37648023653384,2.03700681425136,2.5892652370573,1.62135226775035,1.37280706594041,17.2521847832825,4.46569137202204,3.43241440426017,7.57736633841335,3.94674309748207,3.37710464954357,14.2259956428286,6.82169082373745,5.86673915191293,7.29903868833309,5.39787571063555,14.2380318825543,15.4728366575909,22.6355031515047,16.7093252752562,16.6098517236581,19.4534817762134,9.34020893879707,13.4694285855399,14.3202567995696,0,0.54390568381871,0.983528546038072,1.93155722413313,0.160550589987792,0.35163505977661,6.39346286969034,1.51482556322624,20.5080342620567,12.8844785617891,21.7577631710127,13.6212214832955,16.0415045339324,11.6061377623421,18.2164815753702,16.0740721851222,15.0209355619679,1.28528526568723,7.09700426041343,11.7523298420388,13.3567306669932,7.25868541079156,0,6.31229654002952,4.83717691143602,5.28094223316515,6.79194353625777,5.84126781093462,9.04499026088774,7.99774204850512,5.34746067577082,2.21225730555071,1.05418608574999,1.03135543248187,1.70219802876894,2.70091641046965,6.07985813778946,6.85878512101095,6.91626911204867,6.59964625127661,6.08831376227848,7.61162372786498,3.75474732901937,3.38931313382112,2.42581237860458,2.63818004706368,3.87514624070173,5.36785031860587,3.10368094408155,2.29797259643086,5.82961673259701,0.741701208042039,3.93003025835061,15.0662413613152,9.07453184111587,1.88368457004691,1.36694227721025,1.37266903923914,7.13909405974192,4.89830083132803,6.49539876880792,11.4560474161814,11.8625997592926,8.3360981522008,8.3164112432787,8.36353184057875,8.51613998610093,6.87808166562586,6.03370226794952,6.28214260761671,6.09190374471426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|short_description=p2@Rara
}}

Revision as of 21:51, 12 September 2013

Short description:p2@Rara
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rara_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_001176528, uc007lhz.2_5end
EntrezGene:Rara
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rara

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E745.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F247.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B95.13
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G825.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G931.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H234.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H424.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.45
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F93.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.20
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C56.42
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F54.52
adrenal gland, neonate N00.CNhs11191.1311-23C18.11
adrenal gland, neonate N25.CNhs11223.1377-27I35.03
amnion, adult pregnant day17.5.CNhs10488.583-22A816.56
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F55.99
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C64.55
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C69.93
eyeball, neonate N01.CNhs11140.1532-43E78.58
eyeball, neonate N02.CNhs11205.1551-44G85.81
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E28.84
forelimb, embryo E12.CNhs10600.359-14H26.62
forelimb, embryo E13.CNhs10589.384-1E24.93
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B57.20
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I94.86
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C64.94
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E36.19
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G13.49
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D23.89
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I57.25
intestine, embryo E13.CNhs11010.381-16D58.82
intestine, embryo E15.CNhs10602.976-16D87.99
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E96.92
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F85.37
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I24.68
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G76.87
kidney, neonate N10.CNhs11206.758-6D56.83
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G26.82
lung, embryo E14.CNhs10604.404-26F85.87
lung, embryo E15.CNhs11020.432-17C57.30
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A614.24
lung, embryo E18.CNhs10583.1287-20I615.47
lung, neonate N00.CNhs11224.640-42C622.64
lung, neonate N06.CNhs11212.683-20E516.71
lung, neonate N07.CNhs11111.715-19A316.61
lung, neonate N10.CNhs11219.750-23E619.45
lung, neonate N20.CNhs11109.822-18A49.34
lung, neonate N25.CNhs11119.1359-25C713.47
lung, neonate N30.CNhs11133.1394-42H214.32
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.39
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E120.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.88
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.62
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D418.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.07
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.02
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I77.10
ovary, embryo E18.CNhs11040.505-44H711.75
ovary, neonate N00.CNhs11217.1299-22I413.36
oviduct, adult pregnant day01.CNhs10500.988-6G67.26
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G99.04
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C76.08
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B96.92
pituitary gland, embryo E16.CNhs11036.449-43F66.60
pituitary gland, embryo E17.CNhs11039.1265-44F56.09
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H35.37
skin, neonate N06.CNhs11097.693-20I53.10
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C115.07
spleen, embryo E18.CNhs11011.1271-21F29.07
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.50
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E311.86
stomach, embryo E15.CNhs10603.1252-16G88.34
stomach, embryo E16.CNhs11022.459-17D48.32
stomach, embryo E17.CNhs11006.1035-18D58.36
stomach, embryo E18.CNhs10999.1286-20C68.52
stomach, neonate N03.CNhs11193.1340-24B86.88
stomach, neonate N07.CNhs11210.718-18A96.03
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I16.09
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F513.46
testis, embryo E15.CNhs11034.443-27C512.24
testis, embryo E16.CNhs11033.470-26G511.86
testis, embryo E17.CNhs11029.486-18I514.98
testis, embryo E18.CNhs11027.503-18G510.31
testis, neonate N00.CNhs11189.1300-22B723.82
testis, neonate N07.CNhs11222.726-26I419.40
testis, neonate N10.CNhs11204.763-44D910.38
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I24.31
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G48.94
thymus, neonate N02.CNhs11181.1541-43F86.61
thymus, neonate N03.CNhs11137.2104-43C78.86
thymus, neonate N06.CNhs11197.681-26C48.58
thymus, neonate N07.CNhs11211.713-19D38.31
thymus, neonate N10.CNhs11194.748-24E48.97
thymus, neonate N20.CNhs11186.820-7A28.48
thymus, neonate N25.CNhs11125.1362-25G77.79
thymus, neonate N30.CNhs11132.1393-42G29.23
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E512.09
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I810.27
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B44.87





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung6.68e-0714
respiratory tube6.68e-0714
respiration organ6.68e-0714
pair of lungs6.68e-0714
lung primordium6.68e-0714
lung bud6.68e-0714







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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