FFCP PHASE1:Mm9::chr12:114720620..114720627,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=50|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114720620..114720627,-|id=chr12:114720620..114720627,-|ontology_enrichment_celltype=CL:0000553!1.55e-09!6;CL:0000556!1.55e-09!6|ontology_enrichment_celltype_v019_2=CL:0000945,2.06e-13,1;CL:0000236,2.06e-13,1;CL:0000826,2.06e-13,1;CL:0002031,8.12e-13,25;CL:0000838,3.87e-10,12;CL:0000988,4.41e-10,32;CL:0002032,4.41e-10,32;CL:0000037,4.41e-10,32;CL:0000837,4.41e-10,32;CL:0000542,2.07e-09,13;CL:0000051,2.07e-09,13;CL:0000553,3.15e-09,6;CL:0000556,3.15e-09,6;CL:0000738,2.40e-07,17;CL:0002087,2.40e-07,17;CL:0002320,4.36e-07,46;CL:0000134,4.36e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!6.23e-09!6;UBERON:0004457!6.23e-09!6;UBERON:0000042!6.23e-09!6;UBERON:0004854!6.23e-09!6;UBERON:0009034!6.23e-09!6;UBERON:0002095!6.23e-09!6;UBERON:0004782!6.23e-09!6;UBERON:0003281!6.23e-09!6;UBERON:0009664!6.23e-09!6;UBERON:0002296!6.23e-09!6;UBERON:0005602!6.23e-09!6;UBERON:0001179!6.23e-09!6;UBERON:0006293!6.23e-09!6;UBERON:0003887!4.28e-08!10;UBERON:0007823!4.32e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000029,6.50e-14,1;UBERON:0001097,6.50e-14,1;UBERON:0003968,6.50e-14,1;UBERON:0001467,6.50e-14,1;UBERON:0002384,4.36e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,1.41957974411207,1.7824876368746,0.84877930359606,0,7.04965753526286,6.52999472847338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.10725460376606,0,0,0,0,0,0,0,0,0.289198713839823,1.76922110389975,0,0.883366073841574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,0,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr12:114720620..114720627,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=50 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114720620..114720627,- | |||
|id=chr12:114720620..114720627,- | |||
|ontology_enrichment_celltype=CL:0000553!1.55e-09!6;CL:0000556!1.55e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.06e-13,1;CL:0000236,2.06e-13,1;CL:0000826,2.06e-13,1;CL:0002031,8.12e-13,25;CL:0000838,3.87e-10,12;CL:0000988,4.41e-10,32;CL:0002032,4.41e-10,32;CL:0000037,4.41e-10,32;CL:0000837,4.41e-10,32;CL:0000542,2.07e-09,13;CL:0000051,2.07e-09,13;CL:0000553,3.15e-09,6;CL:0000556,3.15e-09,6;CL:0000738,2.40e-07,17;CL:0002087,2.40e-07,17;CL:0002320,4.36e-07,46;CL:0000134,4.36e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!6.23e-09!6;UBERON:0004457!6.23e-09!6;UBERON:0000042!6.23e-09!6;UBERON:0004854!6.23e-09!6;UBERON:0009034!6.23e-09!6;UBERON:0002095!6.23e-09!6;UBERON:0004782!6.23e-09!6;UBERON:0003281!6.23e-09!6;UBERON:0009664!6.23e-09!6;UBERON:0002296!6.23e-09!6;UBERON:0005602!6.23e-09!6;UBERON:0001179!6.23e-09!6;UBERON:0006293!6.23e-09!6;UBERON:0003887!4.28e-08!10;UBERON:0007823!4.32e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,6.50e-14,1;UBERON:0001097,6.50e-14,1;UBERON:0003968,6.50e-14,1;UBERON:0001467,6.50e-14,1;UBERON:0002384,4.36e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,1.41957974411207,1.7824876368746,0.84877930359606,0,7.04965753526286,6.52999472847338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.10725460376606,0,0,0,0,0,0,0,0,0.289198713839823,1.76922110389975,0,0.883366073841574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,0,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr12:114720620..114720627,- | |||
}} |
Revision as of 22:27, 12 September 2013
Short description: | p@chr12:114720620..114720627, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114720620..114720627, - |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.06e-13 | 1 |
B cell | 2.06e-13 | 1 |
pro-B cell | 2.06e-13 | 1 |
hematopoietic lineage restricted progenitor cell | 8.12e-13 | 25 |
lymphoid lineage restricted progenitor cell | 3.87e-10 | 12 |
hematopoietic cell | 4.41e-10 | 32 |
hematopoietic oligopotent progenitor cell | 4.41e-10 | 32 |
hematopoietic stem cell | 4.41e-10 | 32 |
hematopoietic multipotent progenitor cell | 4.41e-10 | 32 |
lymphocyte | 2.07e-09 | 13 |
common lymphoid progenitor | 2.07e-09 | 13 |
megakaryocyte progenitor cell | 3.15e-09 | 6 |
megakaryocyte | 3.15e-09 | 6 |
leukocyte | 2.40e-07 | 17 |
nongranular leukocyte | 2.40e-07 | 17 |
connective tissue cell | 4.36e-07 | 46 |
mesenchymal cell | 4.36e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
lymph node | 6.50e-14 | 1 |
axillary lymph node | 6.50e-14 | 1 |
peripheral lymph node | 6.50e-14 | 1 |
shoulder | 6.50e-14 | 1 |
connective tissue | 4.36e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.