FFCP PHASE1:Hg19::chr3:30691791..30691820,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7048|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=11773|TSSclassifier=W|UniProt=Q6A176|association_with_transcript=-90bp_to_AJ786388_5end|description=CAGE_peak_6_at_TGFBR2_5end|id=chr3:30691791..30691820,+|ontology_enrichment_celltype=CL:0000136!1.25e-09!15;CL:0002139!9.22e-09!24;CL:0000115!4.26e-08!35|ontology_enrichment_celltype_v019=CL:0000136;2.38e-12;13!CL:0002334;3.74e-10;12!CL:0002138;2.17e-07;6!CL:0000115;3.28e-07;36!CL:0000775;6.97e-07;3|ontology_enrichment_celltype_v019_2=CL:0000136,1.33e-14,15;CL:0002334,4.09e-10,12;CL:0000115,1.19e-08,36;CL:0002078,5.89e-08,45;CL:0005020,1.74e-07,6;CL:0002138,1.74e-07,6;CL:0005022,1.74e-07,6;CL:0000775,5.16e-07,3|ontology_enrichment_development_v019=CL:0005022;2.17e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!2.77e-11!69;UBERON:0004872!1.19e-10!84;UBERON:0002049!2.41e-10!79;UBERON:0007798!2.41e-10!79;UBERON:0001981!2.02e-09!60;UBERON:0007500!2.02e-09!60;UBERON:0004537!2.02e-09!60;UBERON:0006965!2.02e-09!60;UBERON:0001009!9.47e-09!113;UBERON:0004535!1.02e-08!110;UBERON:0003914!4.12e-07!118;UBERON:0004573!4.56e-07!33;UBERON:0004571!4.56e-07!33;UBERON:0001637!5.52e-07!42;UBERON:0003509!5.52e-07!42;UBERON:0004572!5.52e-07!42|ontology_enrichment_uberon_v019=UBERON:0004457;3.21e-11;9!UBERON:0000042;3.21e-11;9!UBERON:0003688;2.35e-10;6!UBERON:0002358;2.35e-10;6!UBERON:0003684;2.35e-10;6!UBERON:0001178;2.35e-10;6!UBERON:0001013;5.76e-07;14!UBERON:0004151;6.59e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.65e-10,6;UBERON:0002358,3.65e-10,6;UBERON:0003684,3.65e-10,6;UBERON:0001178,3.65e-10,6;UBERON:0004457,3.94e-10,12;UBERON:0000042,3.94e-10,12;UBERON:0001013,5.63e-07,14;UBERON:0004151,7.40e-07,3|phase1_expression=2.90685406832891,2.78330681058278,2.67813367782345,1.0007329835313,2.68176656656373,2.61701557230111,2.53299878168311,3.79031924056099,0.783556884599516,0.491467873003018,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0.217010870715852,2.91090116511902,1.6194683300949,2.57575567634187,0.436194716338694,0,0.727752183563449,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0,1.03423704220986,0,1.35426486594342,1.12945403725563,0.818718450173537,0.224723484445085,0.918251677112708,0,1.91801137739712,0,0.199463657621632,0.426224750532694,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0.450530678524519,0.32145117339416,0,0,0,0,1.09227722252426,0.889509253863555,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0,0.786021525498329,0.616804496998528,0.501559486172034,0.32592226663359,0,0,0.668462741311041,0.294605907474837,0,0,0.25618263945135,0.390178042679635,0.328875809207352,0.276350017785848,0.289803085735052,1.4828656316206,0.535081656179426,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0.451725357233318,0.383959833463255,0,0.473554504088034,0,0.201606743224732,0,0.724122019413995,0,0,0,0,0,1.01392563272577,0,0,0.283604451492204,0,0,0.392937226493138,0,0,0,0.696518949197069,0.664789802594326,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0.56530794192401,0.838998872419812,1.6507082516404,0.417989933073621,2.58416759169329,2.13459757612026,2.67776490211736,4.02829317109147,2.28081631715554,1.46437234528902,0.367663080345869,2.43042584364528,0.803697554556718,0.22452937262617,0.225222960966644,0,0.949265659568129,0.732806975721629,0,3.87780264148325,0,0,1.64619665163954,0.397227542439656,3.44203944898576,0.709336764396714,0,2.1349799145941,0.24666754841716,0.622422070799533,0.942974704487816,0.490385709340376,0.605429710579726,0.576175924479999,0,0.312160076830321,0,1.19558944441441,0.352303495931295,0.161872944368132,0.280901613404497,0.204154171254893,0,0.413303124703062,1.18800285728205,0.494533858557114,0,0.718618141816238,0,0.250237039743928,0,0,0.919463387397059,0.751190294532984,0.113432183160021,0.179389635688862,0,0.847727604638247,0,0.206105058476878,0,1.48893485065272,0.506328996723799,0.974370051611986,0,0.552299391853796,1.2931684545505,0.710019185033229,0.403008392910561,0.169560592310488,0.966304265816484,1.63647672354501,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0,1.75600456653801,0,0,0.0925884451585296,0,0,0,0,0,1.87676382089396,0.462985512576611,1.33177906564219,0,0,0.246217006087397,0.702012795417713,0.148631162288728,0,1.51183915378974,0.567100388969546,0,0.290633938513962,0,0.492663237895943,1.93706554829097,0.414656231081544,0.144119953416961,0,0,0.763976851116555,0,0,0,0,0,0.11213108434536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0.594092800654172,0,0,2.6315497034359,0.322289439867886,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.0679914901909147,0,0.5290268405154,2.23197010900051,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,2.27336094654718,0,0.829169439458779,0.20686599172379,0.213233981900981,0.952257725854961,0.710478008196067,0.372448285775147,0,0.572824424503484,0,1.08858373948481,0,0.26940821205835,1.72133292942423,0.665320713092027,0,0.320182037633146,0,0.628776414746108,0,0.611207220914332,0,1.33151354837103,2.21401172950129,0|short_description=p6@TGFBR2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7048 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11773 | |||
|TSSclassifier=W | |||
|UniProt=Q6A176 | |||
|association_with_transcript=-90bp_to_AJ786388_5end | |||
|description=CAGE_peak_6_at_TGFBR2_5end | |||
|id=chr3:30691791..30691820,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.25e-09!15;CL:0002139!9.22e-09!24;CL:0000115!4.26e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.38e-12;13!CL:0002334;3.74e-10;12!CL:0002138;2.17e-07;6!CL:0000115;3.28e-07;36!CL:0000775;6.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.33e-14,15;CL:0002334,4.09e-10,12;CL:0000115,1.19e-08,36;CL:0002078,5.89e-08,45;CL:0005020,1.74e-07,6;CL:0002138,1.74e-07,6;CL:0005022,1.74e-07,6;CL:0000775,5.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;2.17e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.77e-11!69;UBERON:0004872!1.19e-10!84;UBERON:0002049!2.41e-10!79;UBERON:0007798!2.41e-10!79;UBERON:0001981!2.02e-09!60;UBERON:0007500!2.02e-09!60;UBERON:0004537!2.02e-09!60;UBERON:0006965!2.02e-09!60;UBERON:0001009!9.47e-09!113;UBERON:0004535!1.02e-08!110;UBERON:0003914!4.12e-07!118;UBERON:0004573!4.56e-07!33;UBERON:0004571!4.56e-07!33;UBERON:0001637!5.52e-07!42;UBERON:0003509!5.52e-07!42;UBERON:0004572!5.52e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.21e-11;9!UBERON:0000042;3.21e-11;9!UBERON:0003688;2.35e-10;6!UBERON:0002358;2.35e-10;6!UBERON:0003684;2.35e-10;6!UBERON:0001178;2.35e-10;6!UBERON:0001013;5.76e-07;14!UBERON:0004151;6.59e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.65e-10,6;UBERON:0002358,3.65e-10,6;UBERON:0003684,3.65e-10,6;UBERON:0001178,3.65e-10,6;UBERON:0004457,3.94e-10,12;UBERON:0000042,3.94e-10,12;UBERON:0001013,5.63e-07,14;UBERON:0004151,7.40e-07,3 | |||
|phase1_expression=2.90685406832891,2.78330681058278,2.67813367782345,1.0007329835313,2.68176656656373,2.61701557230111,2.53299878168311,3.79031924056099,0.783556884599516,0.491467873003018,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0.217010870715852,2.91090116511902,1.6194683300949,2.57575567634187,0.436194716338694,0,0.727752183563449,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0,1.03423704220986,0,1.35426486594342,1.12945403725563,0.818718450173537,0.224723484445085,0.918251677112708,0,1.91801137739712,0,0.199463657621632,0.426224750532694,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0.450530678524519,0.32145117339416,0,0,0,0,1.09227722252426,0.889509253863555,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0,0.786021525498329,0.616804496998528,0.501559486172034,0.32592226663359,0,0,0.668462741311041,0.294605907474837,0,0,0.25618263945135,0.390178042679635,0.328875809207352,0.276350017785848,0.289803085735052,1.4828656316206,0.535081656179426,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0.451725357233318,0.383959833463255,0,0.473554504088034,0,0.201606743224732,0,0.724122019413995,0,0,0,0,0,1.01392563272577,0,0,0.283604451492204,0,0,0.392937226493138,0,0,0,0.696518949197069,0.664789802594326,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0.56530794192401,0.838998872419812,1.6507082516404,0.417989933073621,2.58416759169329,2.13459757612026,2.67776490211736,4.02829317109147,2.28081631715554,1.46437234528902,0.367663080345869,2.43042584364528,0.803697554556718,0.22452937262617,0.225222960966644,0,0.949265659568129,0.732806975721629,0,3.87780264148325,0,0,1.64619665163954,0.397227542439656,3.44203944898576,0.709336764396714,0,2.1349799145941,0.24666754841716,0.622422070799533,0.942974704487816,0.490385709340376,0.605429710579726,0.576175924479999,0,0.312160076830321,0,1.19558944441441,0.352303495931295,0.161872944368132,0.280901613404497,0.204154171254893,0,0.413303124703062,1.18800285728205,0.494533858557114,0,0.718618141816238,0,0.250237039743928,0,0,0.919463387397059,0.751190294532984,0.113432183160021,0.179389635688862,0,0.847727604638247,0,0.206105058476878,0,1.48893485065272,0.506328996723799,0.974370051611986,0,0.552299391853796,1.2931684545505,0.710019185033229,0.403008392910561,0.169560592310488,0.966304265816484,1.63647672354501,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0,1.75600456653801,0,0,0.0925884451585296,0,0,0,0,0,1.87676382089396,0.462985512576611,1.33177906564219,0,0,0.246217006087397,0.702012795417713,0.148631162288728,0,1.51183915378974,0.567100388969546,0,0.290633938513962,0,0.492663237895943,1.93706554829097,0.414656231081544,0.144119953416961,0,0,0.763976851116555,0,0,0,0,0,0.112131084345361,0.87192013766656,0,0,0,0.845302752556,0.531876233169741,0,0,0,0,0.428933980974443,0,0,1.62868092146868,0,0,0.602878754119172,0,0.299918973546171,0,0.502257091432126,4.21667878966063,0,0,0,1.01346914667305,1.02738161275192,0.895304816199478,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,3.74503511973591,2.99161459204025,4.55857064779639,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,1.50473049863859,0,1.03473071292505,0,0.368738337083406,0.695068915744663,0.195801157462741,0.343143423810856,0.206768026122887,1.2942852049117,0,0.606255142892519,0,0,3.2254015016441,0,1.40330047216537,1.79394808957981,3.07024349440022,1.12597744800525,0,0.925258162815933,2.30830242907065,1.06765302817952,1.55776328755086,1.74315567689939,1.69203229428271,7.01772646061497,0.644566922551274,0.34444334449382,0.546273504020151,1.57349297951309,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,1.19065593693561,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,3.09123034943167,0.0915694648183434,0,0.574265537996172,0,1.6068392984416,2.90012154876366,0.462145851343933,0.15350367472613,0,0.644521469209642,0.145016693914229,0.340906509664404,0.445160178233687,1.81813406897076,1.92190067365106,0.127612712494584,0.30347334256665,3.253918845081,2.51849877464512,0.6970372701606,0.616067160352178,0.532306030317022,1.73986598415015,0.18532421910392,0.429374660225974,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0.636406495851874,0.78494864019923,0,0.54907405947211,0.117812402345686,0.606547444719948,0,0,0,1.94970791705028,2.11300293513511,0.682499557039929,0.989838023675989,0,0.551365343546124,0,0.876901770507525,1.15755106853338,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0.35667105148125,0,1.47775344708365,1.31717957183961,0,0,0.1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| |||
|short_description=p6@TGFBR2 | |||
}} |
Revision as of 23:49, 12 September 2013
Short description: | p6@TGFBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TGFBR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -90bp_to_AJ786388_5end |
EntrezGene: | TGFBR2 |
HGNC: | 11773 |
UniProt: | Q6A176 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.33e-14 | 15 |
preadipocyte | 4.09e-10 | 12 |
endothelial cell | 1.19e-08 | 36 |
meso-epithelial cell | 5.89e-08 | 45 |
lymphangioblast | 1.74e-07 | 6 |
endothelial cell of lymphatic vessel | 1.74e-07 | 6 |
vascular lymphangioblast | 1.74e-07 | 6 |
neutrophil | 5.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.65e-10 | 6 |
peritoneum | 3.65e-10 | 6 |
abdominal cavity | 3.65e-10 | 6 |
visceral peritoneum | 3.65e-10 | 6 |
cavity lining | 3.94e-10 | 12 |
serous membrane | 3.94e-10 | 12 |
adipose tissue | 5.63e-07 | 14 |
cardiac chamber | 7.40e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.