FFCP PHASE1:Mm9::chr13:24151158..24151182,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68732|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=5bp_to_ENSMUST00000147261_5end|description=CAGE_peak_9_at_Lrrc16a_5end|id=chr13:24151158..24151182,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.41e-12,14;UBERON:0003135,2.49e-11,15;UBERON:0003101,1.13e-10,16;UBERON:0000079,1.13e-10,16;UBERON:0004176,4.31e-10,17;UBERON:0009196,4.31e-10,17;UBERON:0009117,4.31e-10,17;UBERON:0000991,1.42e-09,18;UBERON:0005564,1.42e-09,18;UBERON:0003133,2.29e-07,24;UBERON:0005156,7.46e-07,26;UBERON:0000990,7.46e-07,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.67441559540912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.7514515005242,0,0,0,0,0,0,0,0,4.83168241652012,38.3079908322961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@Lrrc16a}} | ||
|EntrezGene=68732 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENSMUST00000147261_5end | |||
|description=CAGE_peak_9_at_Lrrc16a_5end | |||
|id=chr13:24151158..24151182,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.41e-12,14;UBERON:0003135,2.49e-11,15;UBERON:0003101,1.13e-10,16;UBERON:0000079,1.13e-10,16;UBERON:0004176,4.31e-10,17;UBERON:0009196,4.31e-10,17;UBERON:0009117,4.31e-10,17;UBERON:0000991,1.42e-09,18;UBERON:0005564,1.42e-09,18;UBERON:0003133,2.29e-07,24;UBERON:0005156,7.46e-07,26;UBERON:0000990,7.46e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.67441559540912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.7514515005242,0,0,0,0,0,0,0,0,4.83168241652012,38.3079908322961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@Lrrc16a | |||
}} | |||
Revision as of 00:11, 13 September 2013
| Short description: | p9@Lrrc16a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_9_at_Lrrc16a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | 5bp_to_ENSMUST00000147261_5end |
| EntrezGene: | Lrrc16a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| testis | 4.41e-12 | 14 |
| male reproductive organ | 2.49e-11 | 15 |
| male organism | 1.13e-10 | 16 |
| male reproductive system | 1.13e-10 | 16 |
| external genitalia | 4.31e-10 | 17 |
| indifferent external genitalia | 4.31e-10 | 17 |
| indifferent gonad | 4.31e-10 | 17 |
| gonad | 1.42e-09 | 18 |
| gonad primordium | 1.42e-09 | 18 |
| reproductive organ | 2.29e-07 | 24 |
| reproductive structure | 7.46e-07 | 26 |
| reproductive system | 7.46e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
