FFCP PHASE1:Mm9::chr13:56539742..56539754,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=328258|HGNC=|MCL_coexpression_id=2078|UniProt=Q8BW66|association_with_transcript=26bp_to_ENSMUST00000021971,NM_177809,uc007qsn.2_5end|description=CAGE_peak_3_at_Slc25a48_5end|id=chr13:56539742..56539754,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,2.71e-12,3;CL:0002202,2.71e-12,3;CL:0000069,2.71e-12,3;CL:0002632,2.71e-12,3;CL:0002368,2.71e-12,3;CL:0000307,2.71e-12,3;CL:0000377,2.71e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003100!2.58e-11!11;UBERON:0002365!9.27e-11!25;UBERON:0002330!9.27e-11!25;UBERON:0000474!1.87e-09!9;UBERON:0005172!7.20e-09!49;UBERON:0005173!7.20e-09!49;UBERON:0002417!7.20e-09!49;UBERON:0000916!7.20e-09!49;UBERON:0003134!2.29e-08!8;UBERON:0002107!2.46e-08!22;UBERON:0007499!2.46e-08!22;UBERON:0006925!2.46e-08!22;UBERON:0009497!2.46e-08!22;UBERON:0000015!2.46e-08!22;UBERON:0002423!2.46e-08!22;UBERON:0006235!2.46e-08!22;UBERON:0008835!2.46e-08!22;UBERON:0003894!2.46e-08!22;UBERON:0004161!2.46e-08!22;UBERON:0008836!2.46e-08!22;UBERON:0009854!9.44e-08!23;UBERON:0009856!9.44e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0003100,7.10e-16,11;UBERON:0000474,2.17e-14,9;UBERON:0003126,2.71e-12,3;UBERON:0001005,2.71e-12,3;UBERON:0007196,2.71e-12,3;UBERON:0001558,2.71e-12,3;UBERON:0003975,8.26e-12,5;UBERON:0003134,2.92e-11,8;UBERON:0007023,9.03e-10,51;UBERON:0004175,1.07e-09,9;UBERON:0005795,6.00e-09,4;UBERON:0000995,6.00e-09,4;UBERON:0001987,3.49e-08,2;UBERON:0003124,3.49e-08,2;UBERON:0004340,3.49e-08,2;UBERON:0000161,9.64e-07,5|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,4.75058548640935,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,3.46385665617943,3.29367825117628,4.54972000513305,0.79928715803342,0,0.29688427812965,0,0,0,0,0.117588707135705,0,0.494389935468748,3.18118585223806,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,1.0108910337347,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,1.39300866608867,0.823128545631774,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0.193952487167626,0.280543279561274,0.0632365371242573,0.885660887877613,0.941992367048249,2.22114895059241,0.592905254174298,0,0,0.224862112384854,1.01430060694251,0.482354319504834,0.50925170356284,0,0.810676133875177,0.549122826376163,1.43768206527355,1.11642284300551,0.936113019343682,1.01031551178845,0.896987067609561,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93411418415229,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2710413633323,0.534196811001766,0.325773918707152,16.0021019283359,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0,2.11204537257339,1.69465656691056,0,1.81374878235628,0.807322133479528,0.361877549568935,0.477489376012546,1.14898629821543,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.129614973291793,1.24267862617385,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,1.73870634628971,0.750729901804728,4.39563898241436,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0.407412341537585,0.561142271657738,0.237270036248348,0,0,0.309873682371932,0.192906610981141,0,0.233931608445408,1.07435527024149,0,0,0|short_description=p3@Slc25a48}} | ||
|EntrezGene=328258 | |||
|HGNC= | |||
|MCL_coexpression_id=2078 | |||
|UniProt=Q8BW66 | |||
|association_with_transcript=26bp_to_ENSMUST00000021971,NM_177809,uc007qsn.2_5end | |||
|description=CAGE_peak_3_at_Slc25a48_5end | |||
|id=chr13:56539742..56539754,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.71e-12,3;CL:0002202,2.71e-12,3;CL:0000069,2.71e-12,3;CL:0002632,2.71e-12,3;CL:0002368,2.71e-12,3;CL:0000307,2.71e-12,3;CL:0000377,2.71e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!2.58e-11!11;UBERON:0002365!9.27e-11!25;UBERON:0002330!9.27e-11!25;UBERON:0000474!1.87e-09!9;UBERON:0005172!7.20e-09!49;UBERON:0005173!7.20e-09!49;UBERON:0002417!7.20e-09!49;UBERON:0000916!7.20e-09!49;UBERON:0003134!2.29e-08!8;UBERON:0002107!2.46e-08!22;UBERON:0007499!2.46e-08!22;UBERON:0006925!2.46e-08!22;UBERON:0009497!2.46e-08!22;UBERON:0000015!2.46e-08!22;UBERON:0002423!2.46e-08!22;UBERON:0006235!2.46e-08!22;UBERON:0008835!2.46e-08!22;UBERON:0003894!2.46e-08!22;UBERON:0004161!2.46e-08!22;UBERON:0008836!2.46e-08!22;UBERON:0009854!9.44e-08!23;UBERON:0009856!9.44e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003100,7.10e-16,11;UBERON:0000474,2.17e-14,9;UBERON:0003126,2.71e-12,3;UBERON:0001005,2.71e-12,3;UBERON:0007196,2.71e-12,3;UBERON:0001558,2.71e-12,3;UBERON:0003975,8.26e-12,5;UBERON:0003134,2.92e-11,8;UBERON:0007023,9.03e-10,51;UBERON:0004175,1.07e-09,9;UBERON:0005795,6.00e-09,4;UBERON:0000995,6.00e-09,4;UBERON:0001987,3.49e-08,2;UBERON:0003124,3.49e-08,2;UBERON:0004340,3.49e-08,2;UBERON:0000161,9.64e-07,5 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,4.75058548640935,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,3.46385665617943,3.29367825117628,4.54972000513305,0.79928715803342,0,0.29688427812965,0,0,0,0,0.117588707135705,0,0.494389935468748,3.18118585223806,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,1.0108910337347,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,1.39300866608867,0.823128545631774,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0.193952487167626,0.280543279561274,0.0632365371242573,0.885660887877613,0.941992367048249,2.22114895059241,0.592905254174298,0,0,0.224862112384854,1.01430060694251,0.482354319504834,0.50925170356284,0,0.810676133875177,0.549122826376163,1.43768206527355,1.11642284300551,0.936113019343682,1.01031551178845,0.896987067609561,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93411418415229,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2710413633323,0.534196811001766,0.325773918707152,16.0021019283359,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0,2.11204537257339,1.69465656691056,0,1.81374878235628,0.807322133479528,0.361877549568935,0.477489376012546,1.14898629821543,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.129614973291793,1.24267862617385,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,1.73870634628971,0.750729901804728,4.39563898241436,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0.407412341537585,0.561142271657738,0.237270036248348,0,0,0.309873682371932,0.192906610981141,0,0.233931608445408,1.07435527024149,0,0,0 | |||
|short_description=p3@Slc25a48 | |||
}} |
Revision as of 00:52, 13 September 2013
Short description: | p3@Slc25a48 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc25a48_5end |
Coexpression cluster: | MCL_coexpression_mm9:2078 |
Association with transcript: | 26bp_to_ENSMUST00000021971, NM_177809, uc007qsn.2_5end |
EntrezGene: | Slc25a48 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.71e-12 | 3 |
epithelial cell of tracheobronchial tree | 2.71e-12 | 3 |
branched duct epithelial cell | 2.71e-12 | 3 |
epithelial cell of lower respiratory tract | 2.71e-12 | 3 |
respiratory epithelial cell | 2.71e-12 | 3 |
tracheal epithelial cell | 2.71e-12 | 3 |
tracheoblast | 2.71e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
female organism | 7.10e-16 | 11 |
female reproductive system | 2.17e-14 | 9 |
trachea | 2.71e-12 | 3 |
respiratory airway | 2.71e-12 | 3 |
tracheobronchial tree | 2.71e-12 | 3 |
lower respiratory tract | 2.71e-12 | 3 |
internal female genitalia | 8.26e-12 | 5 |
female reproductive organ | 2.92e-11 | 8 |
adult organism | 9.03e-10 | 51 |
internal genitalia | 1.07e-09 | 9 |
embryonic uterus | 6.00e-09 | 4 |
uterus | 6.00e-09 | 4 |
placenta | 3.49e-08 | 2 |
chorion | 3.49e-08 | 2 |
allantois | 3.49e-08 | 2 |
orifice | 9.64e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.