FFCP PHASE1:Hg19::chr3:57960696..57960707,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1800|description=CAGE_peak_at_chr3:57960696..57960707,-|id=chr3:57960696..57960707,-|ontology_enrichment_celltype=CL:0000066!2.45e-10!254;CL:0002150!9.50e-10!3;CL:0000861!9.50e-10!3;CL:1000487!3.30e-07!2;CL:1000507!5.60e-07!12;CL:1000494!5.60e-07!12|ontology_enrichment_celltype_v019=CL:0002097;3.61e-34;2!CL:0000174;2.62e-23;3!CL:0000243;1.37e-16;15!CL:0000125;1.37e-16;15!CL:0000095;5.66e-15;17!CL:0002319;6.90e-11;25!CL:0000150;1.04e-08;9!CL:0000163;1.04e-08;9|ontology_enrichment_celltype_v019_2=CL:0002097,3.61e-34,2;CL:0000174,2.62e-23,3;CL:0000243,1.37e-16,15;CL:0000125,1.37e-16,15;CL:0000030,1.37e-16,15;CL:0000339,1.37e-16,15;CL:0000095,5.66e-15,17;CL:0000123,5.66e-15,17;CL:0002319,6.90e-11,25;CL:0000150,1.04e-08,9;CL:0000163,1.04e-08,9;CL:0000333,3.05e-07,41|ontology_enrichment_development_v019=UBERON:0006238;6.20e-25;10!CL:0000339;1.37e-16;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3093;5.74e-23;11!DOID:170;2.19e-12;6|ontology_enrichment_disease_v019_2=DOID:3093,5.74e-23,11;DOID:170,2.19e-12,6|ontology_enrichment_uberon=UBERON:0003064!2.58e-12!37;UBERON:0000162!2.21e-10!14;UBERON:0001353!2.21e-10!14;UBERON:0000163!2.21e-10!14;UBERON:0006866!2.21e-10!14;UBERON:0000164!2.21e-10!14;UBERON:0000931!2.21e-10!14;UBERON:0002367!4.81e-10!11;UBERON:0010147!4.81e-10!11;UBERON:0009846!4.81e-10!11;UBERON:0003353!4.81e-10!11;UBERON:0004902!4.81e-10!11;UBERON:0003820!4.81e-10!11;UBERON:0009847!4.81e-10!11;UBERON:0004122!1.27e-09!15;UBERON:0003937!3.75e-09!12;UBERON:0005399!3.75e-09!12;UBERON:0006554!3.13e-08!44;UBERON:0001008!5.43e-08!45;UBERON:0001046!2.17e-07!19;UBERON:0009773!5.60e-07!12;UBERON:0001231!5.60e-07!12;UBERON:0004810!5.60e-07!12|ontology_enrichment_uberon_v019=UBERON:0002369;2.62e-23;3!UBERON:0001235;2.62e-23;3!UBERON:0006858;2.62e-23;3|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.62e-23,3;UBERON:0001235,2.62e-23,3;UBERON:0006858,2.62e-23,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0.451199612907412,0,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818149460017238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,1.08723364858891,1.15063130943567,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.89741304669944,0,0,0,0.463044948647668,0.244736704506468,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0.111231401892069,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0|short_description=p@chr3:57960696..57960707,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1800 | |||
|description=CAGE_peak_at_chr3:57960696..57960707,- | |||
|id=chr3:57960696..57960707,- | |||
|ontology_enrichment_celltype=CL:0000066!2.45e-10!254;CL:0002150!9.50e-10!3;CL:0000861!9.50e-10!3;CL:1000487!3.30e-07!2;CL:1000507!5.60e-07!12;CL:1000494!5.60e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002097;3.61e-34;2!CL:0000174;2.62e-23;3!CL:0000243;1.37e-16;15!CL:0000125;1.37e-16;15!CL:0000095;5.66e-15;17!CL:0002319;6.90e-11;25!CL:0000150;1.04e-08;9!CL:0000163;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,3.61e-34,2;CL:0000174,2.62e-23,3;CL:0000243,1.37e-16,15;CL:0000125,1.37e-16,15;CL:0000030,1.37e-16,15;CL:0000339,1.37e-16,15;CL:0000095,5.66e-15,17;CL:0000123,5.66e-15,17;CL:0002319,6.90e-11,25;CL:0000150,1.04e-08,9;CL:0000163,1.04e-08,9;CL:0000333,3.05e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006238;6.20e-25;10!CL:0000339;1.37e-16;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;5.74e-23;11!DOID:170;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,5.74e-23,11;DOID:170,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0003064!2.58e-12!37;UBERON:0000162!2.21e-10!14;UBERON:0001353!2.21e-10!14;UBERON:0000163!2.21e-10!14;UBERON:0006866!2.21e-10!14;UBERON:0000164!2.21e-10!14;UBERON:0000931!2.21e-10!14;UBERON:0002367!4.81e-10!11;UBERON:0010147!4.81e-10!11;UBERON:0009846!4.81e-10!11;UBERON:0003353!4.81e-10!11;UBERON:0004902!4.81e-10!11;UBERON:0003820!4.81e-10!11;UBERON:0009847!4.81e-10!11;UBERON:0004122!1.27e-09!15;UBERON:0003937!3.75e-09!12;UBERON:0005399!3.75e-09!12;UBERON:0006554!3.13e-08!44;UBERON:0001008!5.43e-08!45;UBERON:0001046!2.17e-07!19;UBERON:0009773!5.60e-07!12;UBERON:0001231!5.60e-07!12;UBERON:0004810!5.60e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;2.62e-23;3!UBERON:0001235;2.62e-23;3!UBERON:0006858;2.62e-23;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.62e-23,3;UBERON:0001235,2.62e-23,3;UBERON:0006858,2.62e-23,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0.451199612907412,0,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818149460017238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,1.08723364858891,1.15063130943567,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.89741304669944,0,0,0,0.463044948647668,0.244736704506468,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0.111231401892069,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:57960696..57960707,- | |||
}} |
Revision as of 01:00, 13 September 2013
Short description: | p@chr3:57960696..57960707, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:57960696..57960707, - |
Coexpression cluster: | C1800_mesothelioma_adult_Wilms_liposarcoma_mixed_extraskeletal_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 3.61e-34 | 2 |
steroid hormone secreting cell | 2.62e-23 | 3 |
glial cell (sensu Vertebrata) | 1.37e-16 | 15 |
glial cell | 1.37e-16 | 15 |
glioblast | 1.37e-16 | 15 |
glioblast (sensu Vertebrata) | 1.37e-16 | 15 |
neuron associated cell | 5.66e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 5.66e-15 | 17 |
neural cell | 6.90e-11 | 25 |
glandular epithelial cell | 1.04e-08 | 9 |
endocrine cell | 1.04e-08 | 9 |
migratory neural crest cell | 3.05e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.62e-23 | 3 |
adrenal cortex | 2.62e-23 | 3 |
adrenal/interrenal gland | 2.62e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 5.74e-23 | 11 |
endocrine gland cancer | 2.19e-12 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.