FFCP PHASE1:Mm9::chr13:74487747..74487756,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67433|HGNC=|UniProt=Q3TC33|association_with_transcript=0bp_to_ENSMUST00000022063_5end|description=CAGE_peak_2_at_Ccdc127_5end|id=chr13:74487747..74487756,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004176!2.12e-08!17;UBERON:0009196!2.12e-08!17;UBERON:0009117!2.12e-08!17;UBERON:0000991!2.69e-08!18;UBERON:0005564!2.69e-08!18;UBERON:0003133!1.98e-07!24;UBERON:0005156!3.05e-07!26;UBERON:0000990!3.05e-07!26;UBERON:0000473!7.21e-07!14;UBERON:0003135!7.75e-07!15;UBERON:0000468!8.52e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0004176,1.71e-08,17;UBERON:0009196,1.71e-08,17;UBERON:0009117,1.71e-08,17;UBERON:0000991,2.18e-08,18;UBERON:0005564,2.18e-08,18;UBERON:0003133,1.65e-07,24;UBERON:0005156,2.55e-07,26;UBERON:0000990,2.55e-07,26;UBERON:0000473,6.11e-07,14;UBERON:0003135,6.57e-07,15|phase1_expression=2.88267924788629,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0.671517087647559,1.16806320297763,0.258246646883153,0.703943610758334,0.70219357896598,1.54096171402954,0.558405112967355,0.171200729931206,0.174840804837995,0.333109761815663,0.607425802169478,0.699561878128147,0.473193248037357,0.411343300817216,0.84877930359606,1.7008658030214,0.595745707205312,1.04479915655574,0.47997726838022,0.45881856213434,0.57423196411502,0,0.215471232685889,1.33016393619462,0.252030129759931,0,0,0,0,1.73310971850765,0.498703936075477,1.02084678131185,1.25559489221072,0.7813353445238,1.57057123192139,0,0,0.971020706062307,5.16176953699867,4.25783111121961,4.58866880404204,0.782391344348039,0.436050312760893,0.659058548203415,2.13872888981712,1.95980990275508,2.87505128729943,0.167782606057736,0.725362142011344,0.336093799142464,2.31533492432352,2.0057340795713,2.57836046138721,0.404632921719196,2.11596391708813,1.26766280701236,1.0165335962074,0,1.3498495759221,0,0,0.599200221036809,0.384218305321555,1.45165457231869,2.16009501330705,0.630974884054146,1.71390590642282,1.98781686856452,0.857435594504678,0.670918297127655,0.919218786610021,0,1.53224805702225,2.30409799884365,0.923204014111357,0.731901148819277,2.08365348222704,1.95428099300967,2.8138130501584,1.06958773443767,1.76777151284201,1.85083185038834,2.23679334990361,1.59025005999687,1.81371744256285,1.15945795480671,0.860423876981386,0.679971333707751,0.539703191637817,1.94932925234301,1.79210754838934,2.52799956237153,4.60161870960756,1.55871602761721,2.47337702157238,2.67602497575693,0,5.09610479413291,0,0.649473123033642,1.52015919285059,2.02209778005913,2.05530983494308,1.55362730188303,2.22663208597237,1.90833859442749,2.43572382649713,3.92046345335299,1.95939432718409,1.76383060703557,2.26199864393416,3.46072954828123,2.89198713839823,0,3.07357014900077,1.98757366614354,2.42437626567611,0,2.34224637609238,1.46612694769419,1.02182822083437,0.958520996047362,1.79970819298022,1.52484272487678,2.24685959107234,1.37250180845588,0.879580464790051,2.08589184230732,1.79000820131231,2.49345653471472,2.43361894601636,4.88828946481518,1.99051152976149,2.27450482590307,1.89397670297827,1.69156575851515,0.689706313300419,2.34080768746954,2.71268672104287,2.65342346690179,3.97152532883034,2.24884138943349,3.62184719034622,1.5089759505299,3.40390944302075,2.81521798662318,2.41115305670332,5.00485048606076,3.83077383174383,3.2925141825271,2.18937693500343,1.40442637462647,1.02939162845886,0.852490498186778,1.44988040774851,2.81431271977315,2.16074473753218,1.18372367792605,2.75469924446365,2.62254091908543,2.09280550275367,2.41446061259657,3.15266424391358,3.29119699826961,2.46251196118643,3.08061476274252,3.07019973593198,2.85415149878366,2.81833479396781,0.841159794256509,1.64647379806855,0,0.793351699990633,2.34617075588757,2.55460339046482,2.31961430379768,1.4117846723634,2.44615848229357,2.09248188723815,1.42358718463353,1.31759163779209,2.76468729680296,1.59165177632921,1.55971269695296,0,0.864552199498777,2.19055400579804,2.84501851429623,2.05647322697512,1.1270773567308,2.64746726198909,3.29719228184964,2.31448205638051,2.27651533647326,4.13308414342886,2.511979645462,1.48076596706161,1.1858105083486,1.50160595144485,1.17935397067922,1.12431056192427,1.42002084971952,1.68824011826692,1.2731292589071,0.863088412352432,1.29708181420028,1.09824565275233,1.43768206527355,2.60498663367952,2.49630138491648,2.27320990152401,2.51156378930677,1.92977408545347,0.923765950833023,1.89491411770485,2.77040459951444,3.56464680127895,2.34690248288502,3.51763140627813,3.09456733151818,1.56106918286239,2.67979744980525,1.55025282754142,2.55127629851979,1.96635977658886,2.59027472798843,1.44649058581512,1.50791283939272,1.08781136763742,2.45882136509518,1.93155722413313,3.53211297973142,2.34423373184406,2.45902418065013,3.53459298086122,2.52406575533005,1.56175497718655,0.646270193198397,0.955875191810208,1.33679204449436,1.69845918473299,2.42886421004937,0.292255857911312,2.76701444562566,0.321321316421807,3.2646219597901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| ||
|EntrezGene=67433 | |||
|HGNC= | |||
|UniProt=Q3TC33 | |||
|association_with_transcript=0bp_to_ENSMUST00000022063_5end | |||
|description=CAGE_peak_2_at_Ccdc127_5end | |||
|id=chr13:74487747..74487756,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004176!2.12e-08!17;UBERON:0009196!2.12e-08!17;UBERON:0009117!2.12e-08!17;UBERON:0000991!2.69e-08!18;UBERON:0005564!2.69e-08!18;UBERON:0003133!1.98e-07!24;UBERON:0005156!3.05e-07!26;UBERON:0000990!3.05e-07!26;UBERON:0000473!7.21e-07!14;UBERON:0003135!7.75e-07!15;UBERON:0000468!8.52e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,1.71e-08,17;UBERON:0009196,1.71e-08,17;UBERON:0009117,1.71e-08,17;UBERON:0000991,2.18e-08,18;UBERON:0005564,2.18e-08,18;UBERON:0003133,1.65e-07,24;UBERON:0005156,2.55e-07,26;UBERON:0000990,2.55e-07,26;UBERON:0000473,6.11e-07,14;UBERON:0003135,6.57e-07,15 | |||
|phase1_expression=2.88267924788629,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0.671517087647559,1.16806320297763,0.258246646883153,0.703943610758334,0.70219357896598,1.54096171402954,0.558405112967355,0.171200729931206,0.174840804837995,0.333109761815663,0.607425802169478,0.699561878128147,0.473193248037357,0.411343300817216,0.84877930359606,1.7008658030214,0.595745707205312,1.04479915655574,0.47997726838022,0.45881856213434,0.57423196411502,0,0.215471232685889,1.33016393619462,0.252030129759931,0,0,0,0,1.73310971850765,0.498703936075477,1.02084678131185,1.25559489221072,0.7813353445238,1.57057123192139,0,0,0.971020706062307,5.16176953699867,4.25783111121961,4.58866880404204,0.782391344348039,0.436050312760893,0.659058548203415,2.13872888981712,1.95980990275508,2.87505128729943,0.167782606057736,0.725362142011344,0.336093799142464,2.31533492432352,2.0057340795713,2.57836046138721,0.404632921719196,2.11596391708813,1.26766280701236,1.0165335962074,0,1.3498495759221,0,0,0.599200221036809,0.384218305321555,1.45165457231869,2.16009501330705,0.630974884054146,1.71390590642282,1.98781686856452,0.857435594504678,0.670918297127655,0.919218786610021,0,1.53224805702225,2.30409799884365,0.923204014111357,0.731901148819277,2.08365348222704,1.95428099300967,2.8138130501584,1.06958773443767,1.76777151284201,1.85083185038834,2.23679334990361,1.59025005999687,1.81371744256285,1.15945795480671,0.860423876981386,0.679971333707751,0.539703191637817,1.94932925234301,1.79210754838934,2.52799956237153,4.60161870960756,1.55871602761721,2.47337702157238,2.67602497575693,0,5.09610479413291,0,0.649473123033642,1.52015919285059,2.02209778005913,2.05530983494308,1.55362730188303,2.22663208597237,1.90833859442749,2.43572382649713,3.92046345335299,1.95939432718409,1.76383060703557,2.26199864393416,3.46072954828123,2.89198713839823,0,3.07357014900077,1.98757366614354,2.42437626567611,0,2.34224637609238,1.46612694769419,1.02182822083437,0.958520996047362,1.79970819298022,1.52484272487678,2.24685959107234,1.37250180845588,0.879580464790051,2.08589184230732,1.79000820131231,2.49345653471472,2.43361894601636,4.88828946481518,1.99051152976149,2.27450482590307,1.89397670297827,1.69156575851515,0.689706313300419,2.34080768746954,2.71268672104287,2.65342346690179,3.97152532883034,2.24884138943349,3.62184719034622,1.5089759505299,3.40390944302075,2.81521798662318,2.41115305670332,5.00485048606076,3.83077383174383,3.2925141825271,2.18937693500343,1.40442637462647,1.02939162845886,0.852490498186778,1.44988040774851,2.81431271977315,2.16074473753218,1.18372367792605,2.75469924446365,2.62254091908543,2.09280550275367,2.41446061259657,3.15266424391358,3.29119699826961,2.46251196118643,3.08061476274252,3.07019973593198,2.85415149878366,2.81833479396781,0.841159794256509,1.64647379806855,0,0.793351699990633,2.34617075588757,2.55460339046482,2.31961430379768,1.4117846723634,2.44615848229357,2.09248188723815,1.42358718463353,1.31759163779209,2.76468729680296,1.59165177632921,1.55971269695296,0,0.864552199498777,2.19055400579804,2.84501851429623,2.05647322697512,1.1270773567308,2.64746726198909,3.29719228184964,2.31448205638051,2.27651533647326,4.13308414342886,2.511979645462,1.48076596706161,1.1858105083486,1.50160595144485,1.17935397067922,1.12431056192427,1.42002084971952,1.68824011826692,1.2731292589071,0.863088412352432,1.29708181420028,1.09824565275233,1.43768206527355,2.60498663367952,2.49630138491648,2.27320990152401,2.51156378930677,1.92977408545347,0.923765950833023,1.89491411770485,2.77040459951444,3.56464680127895,2.34690248288502,3.51763140627813,3.09456733151818,1.56106918286239,2.67979744980525,1.55025282754142,2.55127629851979,1.96635977658886,2.59027472798843,1.44649058581512,1.50791283939272,1.08781136763742,2.45882136509518,1.93155722413313,3.53211297973142,2.34423373184406,2.45902418065013,3.53459298086122,2.52406575533005,1.56175497718655,0.646270193198397,0.955875191810208,1.33679204449436,1.69845918473299,2.42886421004937,0.292255857911312,2.76701444562566,0.321321316421807,3.26462195979018,3.02711526234334,5.04949573996086,2.3095817216155,2.65490276679926,1.94224508923985,0.906970670894253,3.20628635585027,2.65771703592696,2.76691633149535,1.80899805217755,1.45413491791002,1.78248689192361,2.84433082142234,5.27093042874994,0,1.70219802876894,1.08036656418786,1.29358683782755,1.71469628025274,1.95074257006501,2.49716344642899,2.46823530903181,0.913394847343798,3.28540391289194,2.75381692122966,1.7642271844397,2.4732937941222,2.09903754704677,2.77439454669517,2.38744688006273,1.96969079694074,2.04036585640896,3.8939313422207,1.53783792718067,3.714963623338,2.22233432843654,1.13021074202815,0.683471138605126,0.686334519619568,0.849892149969277,0.979660166265606,1.24379976423981,2.86401185404534,2.21435195506795,4.67634774391752,2.91614420218863,2.92723614420256,3.27543845619266,2.15782954215713,2.14898984885873,1.57053565190418,1.29614973291793,3.72803587852155,2.81846469342095,3.88743019714345,3.3091698091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| |||
|short_description=p2@Ccdc127 | |||
}} |
Revision as of 01:06, 13 September 2013
Short description: | p2@Ccdc127 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ccdc127_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000022063_5end |
EntrezGene: | Ccdc127 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 1.71e-08 | 17 |
indifferent external genitalia | 1.71e-08 | 17 |
indifferent gonad | 1.71e-08 | 17 |
gonad | 2.18e-08 | 18 |
gonad primordium | 2.18e-08 | 18 |
reproductive organ | 1.65e-07 | 24 |
reproductive structure | 2.55e-07 | 26 |
reproductive system | 2.55e-07 | 26 |
testis | 6.11e-07 | 14 |
male reproductive organ | 6.57e-07 | 15 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.