FFCP PHASE1:Hg19::chr4:4501240..4501257,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C923|description=CAGE_peak_at_chr4:4501240..4501257,-|id=chr4:4501240..4501257,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000313;7.68e-13;1!CL:0002149;1.02e-08;6!CL:0002255;1.02e-08;6!CL:0000159;4.69e-07;2|ontology_enrichment_celltype_v019_2=CL:0000313,1.09e-12,1;CL:0002149,1.04e-08,6;CL:0002255,1.04e-08,6;CL:0000159,5.60e-07,2|ontology_enrichment_development_v019=UBERON:0006242;4.23e-13;1!UBERON:0005795;2.11e-11;10!UBERON:0007297;2.82e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2152;7.68e-13;1!DOID:3001;1.02e-08;6|ontology_enrichment_disease_v019_2=DOID:2152,1.09e-12,1;DOID:3001,1.04e-08,6|ontology_enrichment_uberon=UBERON:0007023!1.51e-11!115;UBERON:0000007!5.00e-11!2;UBERON:0005795!4.87e-08!22;UBERON:0001896!1.99e-07!3;UBERON:0005290!1.99e-07!3;UBERON:0010096!1.99e-07!3;UBERON:0003133!3.19e-07!48;UBERON:0004175!5.60e-07!25;UBERON:0005156!6.86e-07!59;UBERON:0000990!6.86e-07!59;UBERON:0006834!7.90e-07!1;UBERON:0001301!9.30e-07!1|ontology_enrichment_uberon_v019=UBERON:0004175;5.57e-14;21!UBERON:0005795;1.61e-13;1!UBERON:0006834;2.05e-13;1!UBERON:0001301;2.78e-13;1!UBERON:0004911;7.68e-13;1!UBERON:0003134;2.43e-11;33!UBERON:0000995;2.50e-11;17!UBERON:0003975;1.03e-10;18!UBERON:0003133;1.07e-10;44!UBERON:0000474;1.70e-09;37!UBERON:0003100;2.35e-08;41!UBERON:0004909;4.69e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.82e-13,1;UBERON:0005795,2.12e-13,22;UBERON:0001301,2.62e-13,1;UBERON:0004911,1.09e-12,1;UBERON:0004175,9.57e-12,25;UBERON:0003133,2.47e-11,48;UBERON:0003134,5.26e-11,37;UBERON:0000474,5.26e-11,37;UBERON:0003100,6.75e-10,41;UBERON:0000995,3.23e-09,21;UBERON:0005156,4.18e-09,59;UBERON:0000990,4.18e-09,59;UBERON:0003975,8.31e-09,22;UBERON:0005172,1.78e-07,54;UBERON:0005173,1.78e-07,54;UBERON:0004909,5.60e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,2.38545801361771,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,1.13843818411917,0,4.16543372004314,0,0,5.41652671550293,0,0,0,0,0,0,0,0,0,0,0,0,3.84215390530835,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3343139014559,1.15400093896996,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42899623863589,0,6.25211208986474,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669888618013,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60103798587479,34.5861751568378,0,0,0|short_description=p@chr4:4501240..4501257,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C923 | |||
|description=CAGE_peak_at_chr4:4501240..4501257,- | |||
|id=chr4:4501240..4501257,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;7.68e-13;1!CL:0002149;1.02e-08;6!CL:0002255;1.02e-08;6!CL:0000159;4.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.09e-12,1;CL:0002149,1.04e-08,6;CL:0002255,1.04e-08,6;CL:0000159,5.60e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;4.23e-13;1!UBERON:0005795;2.11e-11;10!UBERON:0007297;2.82e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;7.68e-13;1!DOID:3001;1.02e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.09e-12,1;DOID:3001,1.04e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-11!115;UBERON:0000007!5.00e-11!2;UBERON:0005795!4.87e-08!22;UBERON:0001896!1.99e-07!3;UBERON:0005290!1.99e-07!3;UBERON:0010096!1.99e-07!3;UBERON:0003133!3.19e-07!48;UBERON:0004175!5.60e-07!25;UBERON:0005156!6.86e-07!59;UBERON:0000990!6.86e-07!59;UBERON:0006834!7.90e-07!1;UBERON:0001301!9.30e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004175;5.57e-14;21!UBERON:0005795;1.61e-13;1!UBERON:0006834;2.05e-13;1!UBERON:0001301;2.78e-13;1!UBERON:0004911;7.68e-13;1!UBERON:0003134;2.43e-11;33!UBERON:0000995;2.50e-11;17!UBERON:0003975;1.03e-10;18!UBERON:0003133;1.07e-10;44!UBERON:0000474;1.70e-09;37!UBERON:0003100;2.35e-08;41!UBERON:0004909;4.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.82e-13,1;UBERON:0005795,2.12e-13,22;UBERON:0001301,2.62e-13,1;UBERON:0004911,1.09e-12,1;UBERON:0004175,9.57e-12,25;UBERON:0003133,2.47e-11,48;UBERON:0003134,5.26e-11,37;UBERON:0000474,5.26e-11,37;UBERON:0003100,6.75e-10,41;UBERON:0000995,3.23e-09,21;UBERON:0005156,4.18e-09,59;UBERON:0000990,4.18e-09,59;UBERON:0003975,8.31e-09,22;UBERON:0005172,1.78e-07,54;UBERON:0005173,1.78e-07,54;UBERON:0004909,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,2.38545801361771,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,1.13843818411917,0,4.16543372004314,0,0,5.41652671550293,0,0,0,0,0,0,0,0,0,0,0,0,3.84215390530835,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3343139014559,1.15400093896996,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42899623863589,0,6.25211208986474,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669888618013,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60103798587479,34.5861751568378,0,0,0 | |||
|short_description=p@chr4:4501240..4501257,- | |||
}} |
Revision as of 10:59, 13 September 2013
Short description: | p@chr4:4501240..4501257, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:4501240..4501257, - |
Coexpression cluster: | C923_uterus_epididymis_prostate_Hepatocyte_cervix_seminal_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.09e-12 | 1 |
epithelial cell of uterus | 1.04e-08 | 6 |
stromal cell of endometrium | 1.04e-08 | 6 |
seromucus secreting cell | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.82e-13 | 1 |
embryonic uterus | 2.12e-13 | 22 |
epididymis | 2.62e-13 | 1 |
epithelium of female gonad | 1.09e-12 | 1 |
internal genitalia | 9.57e-12 | 25 |
reproductive organ | 2.47e-11 | 48 |
female reproductive organ | 5.26e-11 | 37 |
female reproductive system | 5.26e-11 | 37 |
female organism | 6.75e-10 | 41 |
uterus | 3.23e-09 | 21 |
reproductive structure | 4.18e-09 | 59 |
reproductive system | 4.18e-09 | 59 |
internal female genitalia | 8.31e-09 | 22 |
abdomen element | 1.78e-07 | 54 |
abdominal segment element | 1.78e-07 | 54 |
epithelium of gonad | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.09e-12 | 1 |
female reproductive endometrioid cancer | 1.04e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.