FFCP PHASE1:Mm9::chr15:79788839..79788856,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=53|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:79788839..79788856,-|id=chr15:79788839..79788856,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!7.31e-10!9;UBERON:0000019!7.31e-10!9;UBERON:0000047!7.31e-10!9;UBERON:0004088!7.31e-10!9;UBERON:0002104!7.31e-10!9;UBERON:0001456!7.31e-10!9;UBERON:0003072!7.31e-10!9;UBERON:0003071!7.31e-10!9;UBERON:0004128!7.31e-10!9;UBERON:0001444!9.90e-08!11;UBERON:0000020!6.17e-07!12;UBERON:0001032!6.17e-07!12;UBERON:0004456!6.17e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.14e-19,9;UBERON:0000019,3.14e-19,9;UBERON:0000047,3.14e-19,9;UBERON:0010312,3.14e-19,9;UBERON:0004088,3.14e-19,9;UBERON:0002104,3.14e-19,9;UBERON:0001456,3.14e-19,9;UBERON:0003072,3.14e-19,9;UBERON:0004128,3.14e-19,9;UBERON:0003071,3.14e-19,9;UBERON:0001444,9.62e-16,11;UBERON:0000020,1.96e-14,12;UBERON:0001032,1.96e-14,12;UBERON:0004456,1.96e-14,12;UBERON:0000033,2.52e-13,13;UBERON:0005085,2.52e-13,13;UBERON:0005631,2.68e-10,3;UBERON:0000478,2.68e-10,3;UBERON:0000158,2.68e-10,3;UBERON:0002259,3.50e-08,1;UBERON:0002314,3.50e-08,1;UBERON:0004061,3.50e-08,1;UBERON:0006777,3.50e-08,1;UBERON:0005882,3.50e-08,1;UBERON:0000305,4.10e-08,1;UBERON:0002346,8.63e-08,64;UBERON:0003075,8.63e-08,64;UBERON:0007284,8.63e-08,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0.445326417194474,0,0,0,0.150722640552623,0.117588707135705,0.376999773989026,1.97755974187499,0,0,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0.628340120440365,0,0,0,0,2.09706895166752,0,0,0.347648640384553,0.511430914660661,1.45451631191692,0.973447578406546,0,0.497627882440372,0.758168275301024,0.420883711772948,0.130120442962704,0,0.180062129805349,1.20563854268572,3.6739709541717,4.35586648968489,5.24729657534481,2.84573707812917,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0,0.318909537314974,0.327726629431476,0.345369963731791,1.15719246865209,0,0,0,0,0.963303539926752,1.75817529888305,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,10.1679394014634,0.220528398054962,0,0,0,0.119372344003136,0,0,1.48340241608408,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0.463735671240843|short_description=p@chr15:79788839..79788856,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=53 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:79788839..79788856,- | |||
|id=chr15:79788839..79788856,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!7.31e-10!9;UBERON:0000019!7.31e-10!9;UBERON:0000047!7.31e-10!9;UBERON:0004088!7.31e-10!9;UBERON:0002104!7.31e-10!9;UBERON:0001456!7.31e-10!9;UBERON:0003072!7.31e-10!9;UBERON:0003071!7.31e-10!9;UBERON:0004128!7.31e-10!9;UBERON:0001444!9.90e-08!11;UBERON:0000020!6.17e-07!12;UBERON:0001032!6.17e-07!12;UBERON:0004456!6.17e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.14e-19,9;UBERON:0000019,3.14e-19,9;UBERON:0000047,3.14e-19,9;UBERON:0010312,3.14e-19,9;UBERON:0004088,3.14e-19,9;UBERON:0002104,3.14e-19,9;UBERON:0001456,3.14e-19,9;UBERON:0003072,3.14e-19,9;UBERON:0004128,3.14e-19,9;UBERON:0003071,3.14e-19,9;UBERON:0001444,9.62e-16,11;UBERON:0000020,1.96e-14,12;UBERON:0001032,1.96e-14,12;UBERON:0004456,1.96e-14,12;UBERON:0000033,2.52e-13,13;UBERON:0005085,2.52e-13,13;UBERON:0005631,2.68e-10,3;UBERON:0000478,2.68e-10,3;UBERON:0000158,2.68e-10,3;UBERON:0002259,3.50e-08,1;UBERON:0002314,3.50e-08,1;UBERON:0004061,3.50e-08,1;UBERON:0006777,3.50e-08,1;UBERON:0005882,3.50e-08,1;UBERON:0000305,4.10e-08,1;UBERON:0002346,8.63e-08,64;UBERON:0003075,8.63e-08,64;UBERON:0007284,8.63e-08,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0.445326417194474,0,0,0,0.150722640552623,0.117588707135705,0.376999773989026,1.97755974187499,0,0,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0.628340120440365,0,0,0,0,2.09706895166752,0,0,0.347648640384553,0.511430914660661,1.45451631191692,0.973447578406546,0,0.497627882440372,0.758168275301024,0.420883711772948,0.130120442962704,0,0.180062129805349,1.20563854268572,3.6739709541717,4.35586648968489,5.24729657534481,2.84573707812917,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0,0.318909537314974,0.327726629431476,0.345369963731791,1.15719246865209,0,0,0,0,0.963303539926752,1.75817529888305,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,10.1679394014634,0.220528398054962,0,0,0,0.119372344003136,0,0,1.48340241608408,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0.463735671240843 | |||
|short_description=p@chr15:79788839..79788856,- | |||
}} |
Revision as of 11:13, 13 September 2013
Short description: | p@chr15:79788839..79788856, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:79788839..79788856, - |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 3.14e-19 | 9 |
camera-type eye | 3.14e-19 | 9 |
simple eye | 3.14e-19 | 9 |
immature eye | 3.14e-19 | 9 |
ocular region | 3.14e-19 | 9 |
visual system | 3.14e-19 | 9 |
face | 3.14e-19 | 9 |
optic cup | 3.14e-19 | 9 |
optic vesicle | 3.14e-19 | 9 |
eye primordium | 3.14e-19 | 9 |
subdivision of head | 9.62e-16 | 11 |
sense organ | 1.96e-14 | 12 |
sensory system | 1.96e-14 | 12 |
entire sense organ system | 1.96e-14 | 12 |
head | 2.52e-13 | 13 |
ectodermal placode | 2.52e-13 | 13 |
extraembryonic membrane | 2.68e-10 | 3 |
extraembryonic structure | 2.68e-10 | 3 |
membranous layer | 2.68e-10 | 3 |
corpora quadrigemina | 3.50e-08 | 1 |
midbrain tectum | 3.50e-08 | 1 |
neural tube mantle layer | 3.50e-08 | 1 |
tectal plate | 3.50e-08 | 1 |
neural tube alar plate | 3.50e-08 | 1 |
amnion | 4.10e-08 | 1 |
neurectoderm | 8.63e-08 | 64 |
neural plate | 8.63e-08 | 64 |
presumptive neural plate | 8.63e-08 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.