FFCP PHASE1:Hg19::chr5:102201048..102201059,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5066|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8596|TSSclassifier=S|UniProt=D6R961|association_with_transcript=34bp_to_ENST00000506006_5end|description=CAGE_peak_12_at_PAM_5end|id=chr5:102201048..102201059,+|ontology_enrichment_celltype=CL:0000055!1.20e-19!180;CL:0000057!2.30e-16!75;CL:0002334!1.02e-09!12;CL:0002620!4.51e-09!23|ontology_enrichment_celltype_v019=CL:0002334;6.72e-10;12!CL:0002539;4.06e-08;10!CL:0002579;1.37e-07;3|ontology_enrichment_celltype_v019_2=CL:0002334,8.03e-10,12;CL:0002539,2.67e-08,10;CL:0002579,1.04e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!1.33e-10!365;UBERON:0000468!5.04e-07!659|ontology_enrichment_uberon_v019=UBERON:0004237;4.06e-08;10!UBERON:0004695;4.06e-08;10!UBERON:0002111;4.06e-08;10!UBERON:0004178;4.06e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0004237,2.67e-08,10;UBERON:0004695,2.67e-08,10;UBERON:0002111,2.67e-08,10;UBERON:0004178,2.67e-08,10|phase1_expression=1.81678379270557,0.428201047781966,0.845726424575827,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0,4.70627602516243,1.80808358407193,0.730310090387373,1.95173119516203,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0.869079113764942,0,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.446498641420399,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,1.05927344650575,0.573673241497627,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,0,0.554128230968366,0,0,0.600952235626387,0.113432183160021,0,0.85422955527427,0,0,0.824420233907511,0.257640540045629,0.558350568994769,1.18143432568886,0.974370051611986,0.504867548488229,1.28869858099219,1.2931684545505,0.710019185033229,0.302256294682921,0.847802961552438,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0.234817388471643,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0.22001485746285,0.775630294546667,0,0,1.86156681609409,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0.500170521059677,0.271265023699736,0.831883446123229,0,0,0,0,0,0,0.664225598535437,0,0.868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,1.12264037773229,1.79394808957981,3.07024349440022,0.482561763430822,1.48418066444991,0.462629081407967,0.532685175939381,0.164254312027618,1.03850885836724,0.813472649219715,0,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.330037999682352,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.445160178233687,0,0,0,0,0,2.20368642781448,0,0,0,0,0.9266210955196,0.286249773483982,0,0.316379424718726,0,0,0,0.318203247925937,0,0.719489830333259,0,0.235624804691373,0.404364963146632,0,0,0,0.243713489631284,0,0,0.424216295861138,0,2.2054613741845,0,0.438450885253763,0,0,0.405820753925408,0,0,0.143411352204052,0.294747123039363,0,1.77380532035299,0.422215270595328,0,0.379473173765715,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.284136146806413,0,0,0,0,0.562677665642051,0.111308705022906,0,0,0.398495976502139,0.276283915531148,0,0.20453736500431,0,0.622079175323615,0.179736702294654,0,0,0,0,0,0.969332746095218,0.0927680981618513,1.99613798001194,0,0,0,0.227586896570999,0,0,0.344743373241465,0,0.520874984799877,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,2.30850775511391,0,0,0,0,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,1.08194319871046,0,0.176915129006678,0.611030144933625,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0.394584402849391,0,1.83643656978294,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0.685209623233754,0,0.12662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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5066 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8596 | |||
|TSSclassifier=S | |||
|UniProt=D6R961 | |||
|association_with_transcript=34bp_to_ENST00000506006_5end | |||
|description=CAGE_peak_12_at_PAM_5end | |||
|id=chr5:102201048..102201059,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.20e-19!180;CL:0000057!2.30e-16!75;CL:0002334!1.02e-09!12;CL:0002620!4.51e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.72e-10;12!CL:0002539;4.06e-08;10!CL:0002579;1.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,8.03e-10,12;CL:0002539,2.67e-08,10;CL:0002579,1.04e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.33e-10!365;UBERON:0000468!5.04e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;4.06e-08;10!UBERON:0004695;4.06e-08;10!UBERON:0002111;4.06e-08;10!UBERON:0004178;4.06e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,2.67e-08,10;UBERON:0004695,2.67e-08,10;UBERON:0002111,2.67e-08,10;UBERON:0004178,2.67e-08,10 | |||
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| |||
|short_description=p12@PAM | |||
}} |
Revision as of 12:28, 13 September 2013
Short description: | p12@PAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_PAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_ENST00000506006_5end |
EntrezGene: | PAM |
HGNC: | 8596 |
UniProt: | D6R961 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 8.03e-10 | 12 |
aortic smooth muscle cell | 2.67e-08 | 10 |
omentum preadipocyte | 1.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 2.67e-08 | 10 |
arterial system smooth muscle | 2.67e-08 | 10 |
artery smooth muscle tissue | 2.67e-08 | 10 |
aorta smooth muscle tissue | 2.67e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.