FFCP PHASE1:Mm9::chr16:42912191..42912202,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100503040|HGNC=|MCL_coexpression_id=965|UniProt=|association_with_transcript=-8bp_to_NR_040402_5end|description=CAGE_peak_1_at_Gm19522_5end|id=chr16:42912191..42912202,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.96e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.04e-12!51;UBERON:0004111!3.09e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0002365,7.30e-13,25;UBERON:0002330,7.30e-13,25;UBERON:0002107,8.96e-12,22;UBERON:0007499,8.96e-12,22;UBERON:0006925,8.96e-12,22;UBERON:0009497,8.96e-12,22;UBERON:0000015,8.96e-12,22;UBERON:0002423,8.96e-12,22;UBERON:0006235,8.96e-12,22;UBERON:0008835,8.96e-12,22;UBERON:0003894,8.96e-12,22;UBERON:0004161,8.96e-12,22;UBERON:0008836,8.96e-12,22;UBERON:0009854,3.25e-11,23;UBERON:0009856,3.25e-11,23;UBERON:0003914,7.32e-08,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.183546752161682,0,0,0.659058548203415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.893811366596314,0.614426133024974,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,5.16254326188832,1.3599426674155,0,2.59910566979068,8.51251085484938,1.26399978118577,0.852151612890289,0.519572009205738,0.35333957451034,0,2.56652954828636,0,0,0,0,0,6.2801133845483,0.258937883647172,0.445326417194474,0,0,0,0.150722640552623,0,1.50799909595611,0,7.51916655983541,0,0,0,0.484875253135222,0,1.75668478206928,0.83778682725382,0,0,0,0,1.04853447583376,0.915001205637253,0.251308704225729,1.04294592115366,0,0.62336413367868,0.811206315338788,0,0.373220911830279,0.505445516867349,1.68353484709179,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891756905004413,0.292399974850665,0.878200461164203,3.48936688776967,1.47202963994889,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0.156998727841375,0.246794327843601,5.92905254174298,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.624075346229121,1.51547326768267,1.79397413521912,6.27176577772377,0.923765950833023,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.983179888294428,0.690739927463582,0.723245292907558,0,0,1.47529281905711,0.551873492609465,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.642642632843614,0.99358059645788,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0.441056796109924,0.16488625294148,0,0,0,0.492422699235184,0,0.370850604021019,0.341741761595705,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.518459893167171,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,0.965947970160952,0.375364950902364,0,0.428736758158132,0,0,0.460325236507177,0,0.515559547031063,0,0,0.675022500231806,0.900642406448441,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p1@Gm19522}} | ||
|EntrezGene=100503040 | |||
|HGNC= | |||
|MCL_coexpression_id=965 | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_NR_040402_5end | |||
|description=CAGE_peak_1_at_Gm19522_5end | |||
|id=chr16:42912191..42912202,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.96e-08,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.04e-12!51;UBERON:0004111!3.09e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,7.30e-13,25;UBERON:0002330,7.30e-13,25;UBERON:0002107,8.96e-12,22;UBERON:0007499,8.96e-12,22;UBERON:0006925,8.96e-12,22;UBERON:0009497,8.96e-12,22;UBERON:0000015,8.96e-12,22;UBERON:0002423,8.96e-12,22;UBERON:0006235,8.96e-12,22;UBERON:0008835,8.96e-12,22;UBERON:0003894,8.96e-12,22;UBERON:0004161,8.96e-12,22;UBERON:0008836,8.96e-12,22;UBERON:0009854,3.25e-11,23;UBERON:0009856,3.25e-11,23;UBERON:0003914,7.32e-08,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.183546752161682,0,0,0.659058548203415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.893811366596314,0.614426133024974,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,5.16254326188832,1.3599426674155,0,2.59910566979068,8.51251085484938,1.26399978118577,0.852151612890289,0.519572009205738,0.35333957451034,0,2.56652954828636,0,0,0,0,0,6.2801133845483,0.258937883647172,0.445326417194474,0,0,0,0.150722640552623,0,1.50799909595611,0,7.51916655983541,0,0,0,0.484875253135222,0,1.75668478206928,0.83778682725382,0,0,0,0,1.04853447583376,0.915001205637253,0.251308704225729,1.04294592115366,0,0.62336413367868,0.811206315338788,0,0.373220911830279,0.505445516867349,1.68353484709179,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891756905004413,0.292399974850665,0.878200461164203,3.48936688776967,1.47202963994889,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0.156998727841375,0.246794327843601,5.92905254174298,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.624075346229121,1.51547326768267,1.79397413521912,6.27176577772377,0.923765950833023,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.983179888294428,0.690739927463582,0.723245292907558,0,0,1.47529281905711,0.551873492609465,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.642642632843614,0.99358059645788,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0.441056796109924,0.16488625294148,0,0,0,0.492422699235184,0,0.370850604021019,0.341741761595705,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.518459893167171,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,0.965947970160952,0.375364950902364,0,0.428736758158132,0,0,0.460325236507177,0,0.515559547031063,0,0,0.675022500231806,0.900642406448441,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Gm19522 | |||
}} |
Revision as of 12:41, 13 September 2013
Short description: | p1@Gm19522 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm19522_5end |
Coexpression cluster: | MCL_coexpression_mm9:965 |
Association with transcript: | -8bp_to_NR_040402_5end |
EntrezGene: | Gm19522 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.96e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 7.30e-13 | 25 |
exocrine system | 7.30e-13 | 25 |
liver | 8.96e-12 | 22 |
epithelial sac | 8.96e-12 | 22 |
digestive gland | 8.96e-12 | 22 |
epithelium of foregut-midgut junction | 8.96e-12 | 22 |
anatomical boundary | 8.96e-12 | 22 |
hepatobiliary system | 8.96e-12 | 22 |
foregut-midgut junction | 8.96e-12 | 22 |
hepatic diverticulum | 8.96e-12 | 22 |
liver primordium | 8.96e-12 | 22 |
septum transversum | 8.96e-12 | 22 |
liver bud | 8.96e-12 | 22 |
digestive tract diverticulum | 3.25e-11 | 23 |
sac | 3.25e-11 | 23 |
epithelial tube | 7.32e-08 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.