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UBERON:0003894

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Name:liver primordium
Namespace:FANTOM
Definition:"A small endodermal thickening in the foregut adjacent to the transverse septum. Invaginates forming the hepatic diverticulum." [ISBN:3211492755]
Xrefs:
links:

AAO:0011058
EFO:0003428
EHDAA2:0000744
EHDAA:973
EMAPA:16847
ncithesaurus:Hepatic_Cord
ncithesaurus:Primordium_of_the_Liver
TAO:0000124
XAO:0003266

ZFA:0000124
Synonyms: "embryological hepatic plate" EXACT [UBERON:cjm]
"hepatic plate" RELATED [EHDAA2:0000744]
"liver bud" RELATED INCONSISTENT [XAO:0003266, ZFA:0000124]
"primordium of the liver" EXACT [ncithesaurus:Primordium_of_the_Liver]
Comments:Todo - check hepatic plate; check syns
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005291(embryonic tissue),UBERON:0007497(developing epithelial placode),UBERON:0009497(epithelium of foregut-midgut junction)
develops_from:UBERON:0001041(foregut)
part_of:UBERON:0009550(endoderm of foregut-midgut junction)



Children

develops from:UBERON:0002107 (liver),UBERON:0008835 (hepatic diverticulum)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003894 (liver primordium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data