FFCP PHASE1:Mm9::chr17:36974068..36974156,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22670|HGNC=|UniProt=Q99PN3,B8JJ54,B8JJ57,B8JJ56,Q3TBW8|association_with_transcript=0bp_to_ENSMUST00000053434,ENSMUST00000123715,ENSMUST00000124307,ENSMUST00000130367,ENSMUST00000130801,ENSMUST00000134325,ENSMUST00000144182,NM_001025599,uc008clg.1,uc008clh.1_5end|description=CAGE_peak_1_at_Trim26_5end|id=chr17:36974068..36974156,+|ontology_enrichment_celltype=CL:0000066!6.58e-08!25;CL:0000223!6.69e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,6.58e-08,25;CL:0000223,6.69e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!3.32e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.61e-08,118;UBERON:0000925,1.61e-08,118;UBERON:0006595,1.61e-08,118;UBERON:0004923,3.32e-08,24;UBERON:0001007,7.67e-08,116;UBERON:0001555,7.67e-08,116;UBERON:0007026,7.67e-08,116;UBERON:0004921,3.49e-07,114|phase1_expression=17.6163731815273,53.7422127764616,50.049916332849,83.4801223206851,71.1271936523813,38.4443532678228,39.9477615418349,56.4268923439688,30.2695752626083,36.045937053587,13.6974374580404,19.3846346358667,39.2049671542461,63.2923713513541,16.9885978525988,26.9292105628469,23.785103856357,43.2183166540786,37.8435836751839,42.8633548316011,20.66551950671,6.65249373045932,10.7091913546964,36.4782723968967,30.2820251008664,36.7508457033613,25.8457197695445,32.1052136701975,30.4037471130198,27.7233142735924,21.7295900442199,8.25539875497521,6.1506478758457,0,23.6858328196045,13.6312409193964,14.4960242946282,11.7188856606334,10.9386948233332,7.32933241563318,12.3528612486513,15.7100461540443,13.1087795318411,18.1291417884831,18.3492245507321,13.2153661556411,31.2956537739216,9.59310688073965,15.378032791413,14.1933826324227,24.7775966276892,18.6878333674463,45.3013036355888,55.1275227928622,45.0365690850902,15.1783067261209,18.6246735960192,23.7209162447623,13.1505699558739,13.2247744818008,12.6766280701236,16.2645375393183,23.1216646988896,18.4479442042687,16.8107281636386,19.1829631035447,12.583204641773,10.7581125490035,9.7468235569969,7.83034442323806,8.2026734927039,11.9973413449598,10.1599528837742,8.32937434661688,12.2682202903343,11.9498442259303,11.0115880999389,10.5980490610706,12.2885226604995,11.0784481693363,15.4614117688072,15.106487746146,16.1926139420801,11.8180148106653,10.3902808488231,13.258286346315,18.9354335462807,16.9623495701024,29.7603939799413,19.8753203080846,33.3344162006929,25.8127163094416,15.6393406752783,18.8896117073236,28.5901623676974,22.4013443548668,16.993774835942,17.5543232255399,12.7295142255406,19.4336765980687,16.0561498545416,29.5150898052931,35.6727335589304,85.3280043783997,21.8655951421326,23.3091076237091,20.2209778005913,23.6360631018454,64.7344709117929,27.6102378660574,14.7462527751215,16.1366703505435,14.0675453326196,13.2635923686308,23.1649753057338,27.0183171358802,45.9782639985935,17.3519228303894,14.153768831198,15.0443170451091,17.4464799583711,11.1521308221101,44.7340226923493,14.3462590535658,15.4990563041957,37.2967300604543,10.0644704584973,8.99854096490112,8.51370521389534,12.7322043494099,9.60751265919116,10.4293112253677,9.03886464999838,8.18289463457058,9.97382613885888,10.8701646255398,23.2193749578721,20.1539292388351,19.9650979162603,23.7799297151716,15.354212269599,15.4034409970427,12.7844112161798,10.7000420663358,17.8255627776479,16.6547836370305,16.585205247072,29.4921842642478,12.9340795759705,17.2086532952716,15.3077478022636,16.001288467213,15.0145514581823,11.1440693287093,15.8452245034116,10.5488161413801,5.61770549850588,9.26452465612975,8.52490498186778,9.11353399156208,10.3191466391682,10.4435995647389,9.2330446878232,9.64144735562279,8.4846912088058,9.99895962426754,10.9992094573844,11.0927075248811,11.0255099442032,12.148392341853,16.0516242900794,13.8889988054066,12.7339066868809,16.1047702512446,8.20130799400096,12.9659811597898,48.5715610986183,31.2051668662982,14.9301775374664,11.8440702648824,16.7527699718721,13.1094291005173,11.3412802360884,12.3646656973163,33.6915633696603,15.811099653505,22.8715040008245,19.0998213159505,22.8107981929371,37.7504151634773,28.7463606333343,35.0488640927686,14.9837641752935,13.3670759753383,15.7790829942313,11.8117770150282,17.6496763322539,20.5497952278633,17.6429938576678,15.7942858338174,16.0138702398202,18.0159859325829,19.862326014839,8.00856507437251,9.82794975566015,8.09503604585473,15.4173692255262,15.6765153839071,15.2775511068852,22.727994858614,17.8348749452539,17.8464918572253,28.7536413054709,29.3991348658118,31.2037673114561,30.5620442316005,21.5276896226295,28.4641677604387,18.8448253969937,13.6433816474749,11.2445833744998,12.7308814331391,12.6732734075791,15.5780819420889,20.9478403979692,24.7819732779405,24.1181770482472,19.2674279994434,25.5127629851979,24.0879072632135,23.13978757003,27.9172683062317,24.1266054302836,26.1074728232981,22.1293922858566,22.3508764506833,13.4862495589745,14.7686725106176,8.52461715958712,12.6235463602186,16.4064274096453,14.4462335389756,14.6487910458303,18.87853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| ||
|EntrezGene=22670 | |||
|HGNC= | |||
|UniProt=Q99PN3,B8JJ54,B8JJ57,B8JJ56,Q3TBW8 | |||
|association_with_transcript=0bp_to_ENSMUST00000053434,ENSMUST00000123715,ENSMUST00000124307,ENSMUST00000130367,ENSMUST00000130801,ENSMUST00000134325,ENSMUST00000144182,NM_001025599,uc008clg.1,uc008clh.1_5end | |||
|description=CAGE_peak_1_at_Trim26_5end | |||
|id=chr17:36974068..36974156,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.58e-08!25;CL:0000223!6.69e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.58e-08,25;CL:0000223,6.69e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!3.32e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.61e-08,118;UBERON:0000925,1.61e-08,118;UBERON:0006595,1.61e-08,118;UBERON:0004923,3.32e-08,24;UBERON:0001007,7.67e-08,116;UBERON:0001555,7.67e-08,116;UBERON:0007026,7.67e-08,116;UBERON:0004921,3.49e-07,114 | |||
|phase1_expression=17.6163731815273,53.7422127764616,50.049916332849,83.4801223206851,71.1271936523813,38.4443532678228,39.9477615418349,56.4268923439688,30.2695752626083,36.045937053587,13.6974374580404,19.3846346358667,39.2049671542461,63.2923713513541,16.9885978525988,26.9292105628469,23.785103856357,43.2183166540786,37.8435836751839,42.8633548316011,20.66551950671,6.65249373045932,10.7091913546964,36.4782723968967,30.2820251008664,36.7508457033613,25.8457197695445,32.1052136701975,30.4037471130198,27.7233142735924,21.7295900442199,8.25539875497521,6.1506478758457,0,23.6858328196045,13.6312409193964,14.4960242946282,11.7188856606334,10.9386948233332,7.32933241563318,12.3528612486513,15.7100461540443,13.1087795318411,18.1291417884831,18.3492245507321,13.2153661556411,31.2956537739216,9.59310688073965,15.378032791413,14.1933826324227,24.7775966276892,18.6878333674463,45.3013036355888,55.1275227928622,45.0365690850902,15.1783067261209,18.6246735960192,23.7209162447623,13.1505699558739,13.2247744818008,12.6766280701236,16.2645375393183,23.1216646988896,18.4479442042687,16.8107281636386,19.1829631035447,12.583204641773,10.7581125490035,9.7468235569969,7.83034442323806,8.2026734927039,11.9973413449598,10.1599528837742,8.32937434661688,12.2682202903343,11.9498442259303,11.0115880999389,10.5980490610706,12.2885226604995,11.0784481693363,15.4614117688072,15.106487746146,16.1926139420801,11.8180148106653,10.3902808488231,13.258286346315,18.9354335462807,16.9623495701024,29.7603939799413,19.8753203080846,33.3344162006929,25.8127163094416,15.6393406752783,18.8896117073236,28.5901623676974,22.4013443548668,16.993774835942,17.5543232255399,12.7295142255406,19.4336765980687,16.0561498545416,29.5150898052931,35.6727335589304,85.3280043783997,21.8655951421326,23.3091076237091,20.2209778005913,23.6360631018454,64.7344709117929,27.6102378660574,14.7462527751215,16.1366703505435,14.0675453326196,13.2635923686308,23.1649753057338,27.0183171358802,45.9782639985935,17.3519228303894,14.153768831198,15.0443170451091,17.4464799583711,11.1521308221101,44.7340226923493,14.3462590535658,15.4990563041957,37.2967300604543,10.0644704584973,8.99854096490112,8.51370521389534,12.7322043494099,9.60751265919116,10.4293112253677,9.03886464999838,8.18289463457058,9.97382613885888,10.8701646255398,23.2193749578721,20.1539292388351,19.9650979162603,23.7799297151716,15.354212269599,15.4034409970427,12.7844112161798,10.7000420663358,17.8255627776479,16.6547836370305,16.585205247072,29.4921842642478,12.9340795759705,17.2086532952716,15.3077478022636,16.001288467213,15.0145514581823,11.1440693287093,15.8452245034116,10.5488161413801,5.61770549850588,9.26452465612975,8.52490498186778,9.11353399156208,10.3191466391682,10.4435995647389,9.2330446878232,9.64144735562279,8.4846912088058,9.99895962426754,10.9992094573844,11.0927075248811,11.0255099442032,12.148392341853,16.0516242900794,13.8889988054066,12.7339066868809,16.1047702512446,8.20130799400096,12.9659811597898,48.5715610986183,31.2051668662982,14.9301775374664,11.8440702648824,16.7527699718721,13.1094291005173,11.3412802360884,12.3646656973163,33.6915633696603,15.811099653505,22.8715040008245,19.0998213159505,22.8107981929371,37.7504151634773,28.7463606333343,35.0488640927686,14.9837641752935,13.3670759753383,15.7790829942313,11.8117770150282,17.6496763322539,20.5497952278633,17.6429938576678,15.7942858338174,16.0138702398202,18.0159859325829,19.862326014839,8.00856507437251,9.82794975566015,8.09503604585473,15.4173692255262,15.6765153839071,15.2775511068852,22.727994858614,17.8348749452539,17.8464918572253,28.7536413054709,29.3991348658118,31.2037673114561,30.5620442316005,21.5276896226295,28.4641677604387,18.8448253969937,13.6433816474749,11.2445833744998,12.7308814331391,12.6732734075791,15.5780819420889,20.9478403979692,24.7819732779405,24.1181770482472,19.2674279994434,25.5127629851979,24.0879072632135,23.13978757003,27.9172683062317,24.1266054302836,26.1074728232981,22.1293922858566,22.3508764506833,13.4862495589745,14.7686725106176,8.52461715958712,12.6235463602186,16.4064274096453,14.4462335389756,14.6487910458303,18.8785350382516,20.943075363745,18.6830510320629,17.0020494703456,14.028281179743,20.5549644532192,13.1741739732941,30.5171183197778,14.9575107080494,23.7814960656221,20.4562952485944,6.63725691699814,7.76898035695941,7.25576536715402,6.41257271170054,10.0402643579463,9.22305443831782,14.9888410037568,13.4507479906677,11.7644134866958,14.8537276229834,7.37930260024991,11.3449097573006,19.7454971337197,15.3051929926614,16.8166288917581,15.8609405923378,23.4089108407801,16.0531935841863,16.29035303961,20.7036165397928,29.3339635079638,37.0706124011685,26.9044645627054,31.3283880588812,23.5738062976022,17.7319999288778,17.4283622244579,16.4140899745061,30.3140070095045,15.0194494628513,22.5549562653166,17.5428837768739,19.0750363190803,15.822950388394,17.9069438314543,26.5382680919566,17.677756719361,18.0537373497519,17.9659965945751,25.7761066864081,14.0769517143605,14.029043231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| |||
|short_description=p1@Trim26 | |||
}} |
Revision as of 14:29, 13 September 2013
Short description: | p1@Trim26 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trim26_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000053434, ENSMUST00000123715, ENSMUST00000124307, ENSMUST00000130367, ENSMUST00000130801, ENSMUST00000134325, ENSMUST00000144182, NM_001025599, uc008clg.1, uc008clh.1_5end |
EntrezGene: | Trim26 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.58e-08 | 25 |
endodermal cell | 6.69e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.61e-08 | 118 |
endoderm | 1.61e-08 | 118 |
presumptive endoderm | 1.61e-08 | 118 |
organ component layer | 3.32e-08 | 24 |
digestive system | 7.67e-08 | 116 |
digestive tract | 7.67e-08 | 116 |
primitive gut | 7.67e-08 | 116 |
subdivision of digestive tract | 3.49e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.