FFCP PHASE1:Hg19::chr5:34656317..34656330,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26064|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14873|TSSclassifier=S|UniProt=Q9P0K7|association_with_transcript=-11bp_to_ENST00000265109_5end|description=CAGE_peak_6_at_RAI14_5end|id=chr5:34656317..34656330,+|ontology_enrichment_celltype=CL:0000055!1.26e-16!180;CL:0000066!1.45e-11!254;CL:0002321!9.95e-11!248;CL:0000220!3.59e-10!246;CL:0002076!4.35e-07!43;CL:0000057!7.90e-07!75|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,2.20e-08,253;CL:0002321,6.21e-07,250;CL:0000221,6.58e-07,72|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!3.88e-11!143;DOID:14566!6.22e-11!239;DOID:162!4.59e-10!235;DOID:305!1.13e-09!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:14566,5.40e-09,239;DOID:162,3.06e-08,235|ontology_enrichment_uberon=UBERON:0004119!4.47e-09!169;UBERON:0000925!4.47e-09!169;UBERON:0006595!4.47e-09!169;UBERON:0003104!4.99e-09!238;UBERON:0009142!4.99e-09!238;UBERON:0003102!5.27e-09!95;UBERON:0002323!5.87e-08!46;UBERON:0000475!6.25e-08!365;UBERON:0002100!7.98e-08!216;UBERON:0001007!9.22e-08!155;UBERON:0001555!9.22e-08!155;UBERON:0007026!9.22e-08!155;UBERON:0000464!1.95e-07!104;UBERON:0004458!5.87e-07!49;UBERON:0005156!6.53e-07!59;UBERON:0000990!6.53e-07!59|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.71e-09,99;UBERON:0002323,9.78e-07,46|phase1_expression=1.45342703416445,0.642301571672949,0.845726424575827,1.0007329835313,2.23480547213644,2.61701557230111,0,1.89515962028049,0.261185628199839,1.47440361900905,0,1.31064823278103,0.527533956456907,0.247532705920093,0.331397375727916,2.01697543935533,3.61616716814386,0,0.975865597581014,0.61560529038394,1.22400414746552,0,0.85870796139317,0.547497700291537,2.00868223351684,0,0,0,0,0,0,1.83884244895785,1.8072355126695,0.369754010166788,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,1.0843174571537,0.50133791063589,1.44846518960824,2.3858578411533,0.973269740605272,1.70162670895322,1.55210578223795,1.14185221401064,0.654895377488563,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.516833518338658,0,1.00416183829401,0,1.52054421143703,0,0,0,0.17859945656816,0.673588117878509,0.337834441449967,0,0,0.732806975721629,0,0,0,0.496971951695318,1.64619665163954,1.05927344650575,0.860509862246441,1.06400514659507,1.12135520028461,0,1.72667283892012,0.311211035399766,1.0776853765575,0.980771418680752,0.302714855289863,0,0.70296429550139,2.18512053781224,0,1.49448680551801,1.76151747965647,2.42809416552197,1.96631129383148,1.22492502752936,0.737005903870608,1.96318984233954,0,2.22540236350701,1.82032272387605,0.718618141816238,2.02003336744879,1.62654075833553,3.04770527032601,0.877955241761676,1.5324389789951,3.60571341375832,1.24775401476023,0.358779271377724,2.34913127700424,2.54318281391474,0.600182192168805,2.37020817248409,0.257640540045629,1.11670113798954,1.0126579934476,2.82567314967476,0.757301322732344,1.01254888506529,2.7479829659198,0,1.30977727695932,0.847802961552438,1.54608682530637,1.36373060295417,1.14721838155602,2.80539524098069,1.98794652482228,1.85910308591229,1.86589899027667,0.756962552626885,1.45990943630332,0,0.643240938192885,2.76269842704961,2.3218396401599,2.16563844500876,1.0647612003586,0.168584690078102,0.241011029883482,0.661763836394364,0.435758888184812,0.474541238222193,0.943819157121151,1.37355025587742,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.860919069801795,1.3725424823882,1.09750285408626,1.1240175325762,1.80952150340936,1.85176890317059,0.325808305310325,0,1.44331342025273,1.27523445472584,0.70445216541493,0.288732895522148,0,0.951270761172991,0,0,0,0.234004265139238,0.148631162288728,1.87467667973554,0.671928512795438,1.55952606966625,1.97028749946266,1.16253575405585,0,0,0.264145302039678,0.414656231081544,1.00883967391873,0.25248486685276,1.39695367442772,0,0,3.4214489204541,1.54241239054985,2.10240140490742,2.85826432630578,0.336393253036082,0.43596006883328,1.10007428731425,1.29271715757778,0,0.845302752556,2.6593811658487,0,1.54324424557285,0,0.266422179016099,1.28680194292333,0,1.64648067356154,1.62868092146868,0.355391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0.99972991182057,0,0,0,1.19812427745791,0,1.42636905040718,3.04040744001916,1.84928690295345,0.716243852959582,0,0,0,0,0,0,0.773288812777695,0.837581326671744,0,0,0,0,1.47229790062968,0,0.542530047399471,0.623912584592421,0.713715955188647,1.26161932027148,1.05427273493442,1.20378439891088,0,3.10419213877515,2.65690239414175,1.29058417979192,1.82455590382974,0,0.68628684762171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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26064 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14873 | |||
|TSSclassifier=S | |||
|UniProt=Q9P0K7 | |||
|association_with_transcript=-11bp_to_ENST00000265109_5end | |||
|description=CAGE_peak_6_at_RAI14_5end | |||
|id=chr5:34656317..34656330,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.26e-16!180;CL:0000066!1.45e-11!254;CL:0002321!9.95e-11!248;CL:0000220!3.59e-10!246;CL:0002076!4.35e-07!43;CL:0000057!7.90e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.20e-08,253;CL:0002321,6.21e-07,250;CL:0000221,6.58e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.88e-11!143;DOID:14566!6.22e-11!239;DOID:162!4.59e-10!235;DOID:305!1.13e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.40e-09,239;DOID:162,3.06e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.47e-09!169;UBERON:0000925!4.47e-09!169;UBERON:0006595!4.47e-09!169;UBERON:0003104!4.99e-09!238;UBERON:0009142!4.99e-09!238;UBERON:0003102!5.27e-09!95;UBERON:0002323!5.87e-08!46;UBERON:0000475!6.25e-08!365;UBERON:0002100!7.98e-08!216;UBERON:0001007!9.22e-08!155;UBERON:0001555!9.22e-08!155;UBERON:0007026!9.22e-08!155;UBERON:0000464!1.95e-07!104;UBERON:0004458!5.87e-07!49;UBERON:0005156!6.53e-07!59;UBERON:0000990!6.53e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.71e-09,99;UBERON:0002323,9.78e-07,46 | |||
|phase1_expression=1.45342703416445,0.642301571672949,0.845726424575827,1.0007329835313,2.23480547213644,2.61701557230111,0,1.89515962028049,0.261185628199839,1.47440361900905,0,1.31064823278103,0.527533956456907,0.247532705920093,0.331397375727916,2.01697543935533,3.61616716814386,0,0.975865597581014,0.61560529038394,1.22400414746552,0,0.85870796139317,0.547497700291537,2.00868223351684,0,0,0,0,0,0,1.83884244895785,1.8072355126695,0.369754010166788,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,1.0843174571537,0.50133791063589,1.44846518960824,2.3858578411533,0.973269740605272,1.70162670895322,1.55210578223795,1.14185221401064,0.654895377488563,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.516833518338658,0,1.00416183829401,0,1.52054421143703,0,0,0,0.17859945656816,0.673588117878509,0.337834441449967,0,0,0.732806975721629,0,0,0,0.496971951695318,1.64619665163954,1.05927344650575,0.860509862246441,1.06400514659507,1.12135520028461,0,1.72667283892012,0.311211035399766,1.0776853765575,0.980771418680752,0.302714855289863,0,0.70296429550139,2.18512053781224,0,1.49448680551801,1.76151747965647,2.42809416552197,1.96631129383148,1.22492502752936,0.737005903870608,1.96318984233954,0,2.22540236350701,1.82032272387605,0.718618141816238,2.02003336744879,1.62654075833553,3.04770527032601,0.877955241761676,1.5324389789951,3.60571341375832,1.24775401476023,0.358779271377724,2.34913127700424,2.54318281391474,0.600182192168805,2.37020817248409,0.257640540045629,1.11670113798954,1.0126579934476,2.82567314967476,0.757301322732344,1.01254888506529,2.7479829659198,0,1.30977727695932,0.847802961552438,1.54608682530637,1.36373060295417,1.14721838155602,2.80539524098069,1.98794652482228,1.85910308591229,1.86589899027667,0.756962552626885,1.45990943630332,0,0.643240938192885,2.76269842704961,2.3218396401599,2.16563844500876,1.0647612003586,0.168584690078102,0.241011029883482,0.661763836394364,0.435758888184812,0.474541238222193,0.943819157121151,1.37355025587742,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.860919069801795,1.3725424823882,1.09750285408626,1.1240175325762,1.80952150340936,1.85176890317059,0.325808305310325,0,1.44331342025273,1.27523445472584,0.70445216541493,0.288732895522148,0,0.951270761172991,0,0,0,0.234004265139238,0.148631162288728,1.87467667973554,0.671928512795438,1.55952606966625,1.97028749946266,1.16253575405585,0,0,0.264145302039678,0.414656231081544,1.00883967391873,0.25248486685276,1.39695367442772,0,0,3.4214489204541,1.54241239054985,2.10240140490742,2.85826432630578,0.336393253036082,0.43596006883328,1.10007428731425,1.29271715757778,0,0.845302752556,2.6593811658487,0,1.54324424557285,0,0.266422179016099,1.28680194292333,0,1.64648067356154,1.62868092146868,0.355391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0.99972991182057,0,0,0,1.19812427745791,0,1.42636905040718,3.04040744001916,1.84928690295345,0.716243852959582,0,0,0,0,0,0,0.773288812777695,0.837581326671744,0,0,0,0,1.47229790062968,0,0.542530047399471,0.623912584592421,0.713715955188647,1.26161932027148,1.05427273493442,1.20378439891088,0,3.10419213877515,2.65690239414175,1.29058417979192,1.82455590382974,0,0.686286847621712,0,0,0,0.303127571446259,1.66435439510497,0,0.744323423456331,0.460385919864187,0.841980283299221,1.28139149255701,2.55853624533352,1.28683136914886,0,3.08419387605311,1.59805552781814,2.62806899244189,1.55776328755086,1.74315567689939,0.604297247958111,2.00506470303285,3.40699659062816,1.26295892981067,0.364182336013434,1.04899531967539,0.451199612907412,2.23344477602803,1.56869953835371,0,2.74434235121477,0,0,1.29549549661284,0,0,0.501689773854853,0.764628819135115,0,0.447749509444357,0,0,2.05160100093111,0.328014645699706,1.30151357865721,0.9273691048295,0.54941678891006,0.495056999523528,1.14853107599234,0,4.82051789532479,0.773365746336976,0.462145851343933,1.07452572308291,2.06754858726796,1.39646318328756,1.59518363305651,1.53407929348982,1.15741646340759,1.65284915360978,2.49847087574638,1.53135254993501,2.32662895967765,2.78907329578371,1.5740617341532,0,0.308033580176089,1.06461206063404,1.73986598415015,0.18532421910392,1.43124886741991,1.116475108079,2.21465597303108,1.14378116354295,1.535386747868,0.42793898803392,0.95460974377781,0,0.539617372749944,0.54907405947211,0.824686816419805,1.01091240786658,0,0.842516912477962,0,0.974853958525138,0,0.409499734223957,0.707027159768564,1.13008116620243,2.2054613741845,0,0,0.578775534266688,1.31178950409327,0.608731130888112,0.30982349809975,1.40847801266121,2.00775893085672,1.08073945114433,2.1400263088875,0.709522128141196,0.211107635297664,0.329294892959902,0,0.699869440489966,0.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| |||
|short_description=p6@RAI14 | |||
}} |
Revision as of 15:28, 13 September 2013
Short description: | p6@RAI14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RAI14_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000265109_5end |
EntrezGene: | RAI14 |
HGNC: | 14873 |
UniProt: | Q9P0K7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.20e-08 | 253 |
embryonic cell | 6.21e-07 | 250 |
ectodermal cell | 6.58e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.71e-09 | 99 |
body cavity | 9.78e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.40e-09 | 239 |
cancer | 3.06e-08 | 235 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.