FFCP PHASE1:Mm9::chr17:86087592..86087615,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20472|HGNC=|MCL_coexpression_id=3122|UniProt=Q62232,Q8BSP4|association_with_transcript=0bp_to_ENSMUST00000024947,ENSMUST00000163568,NM_011380,uc008duc.2_5end|description=CAGE_peak_1_at_Six2_5end|id=chr17:86087592..86087615,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!2.36e-07!8;UBERON:0003296!2.36e-07!8;UBERON:0010133!2.36e-07!8;UBERON:0001894!6.33e-07!10;UBERON:0006222!6.33e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.19e-11,43;UBERON:0000007,4.15e-09,8;UBERON:0003296,4.15e-09,8;UBERON:0010133,4.15e-09,8;UBERON:0007811,1.72e-07,36;UBERON:0001894,9.96e-07,10;UBERON:0006222,9.96e-07,10|phase1_expression=26.9050063136054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,12.0388322597812,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,0,0.606949382578793,0.528990979272033,0,9.14880236586657,27.5681386794453,0,0,0,9.58720353658895,9.22123932771731,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0.244981598429908,0.0958454710182364,0.919218786610021,0,0,0,0.131886287730194,0,1.04182674111352,0,0,0.61119299110724,0,0.142371680799103,0,0.984440513331393,1.20914496170857,0,0,0,0,0,0,3.65155492342555,0,0,0,31.4080826101998,0,0,0,3.68034769719064,4.30711771307668,3.0331466700887,1.02765491747154,0,0,3.29622120855658,0.608930956624282,1.38369298353635,0,0.117588707135705,0.125666591329675,0,0,0,2.42650274921114,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0.347648640384553,1.27857728665165,0.41557608911912,0.324482526135515,0,0.124406970610093,0,0.631325567659422,16.7855371421888,10.1156925950728,7.56260945182467,4.52114453507145,2.65342346690179,3.20284300712124,2.43624483855295,0.258703370739016,9.7005596819779,22.8818357003061,19.3546236580344,10.5213951565236,3.33656699070717,4.179025998266,2.26360350048738,0.796137067273973,0,0,0,1.24275463521301,0.469052119962192,0.180062061461015,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0.411618449517138,0,0,4.47905326123991,2.55460339046482,0.257734922644187,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,38.1232480915694,26.6199034380668,31.5581659884625,20.5687841123767,19.9771061782655,15.5701520156507,0,0,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,1.70542270593436,0.488894929326078,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30188947129183,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,1.32745138339963,0.485561272309963,0.302323556964751,0.754420319023592,0,0,0,0.363533729477506,0,0,0,0,9.19186935535228,33.671424583855,39.7131159213056,64.3011105094777,35.1133662611702,33.5333377091893,26.6569413375436,24.3571959291679,0,0,0,0,0,0.301564624640779,0.119372344003136,0,0,0,0,0.412773735926445,0,0,0,0,0,0,0,1.90934123603023,36.8531432522023,11.3858901591035,7.12835249423888,7.3180903605064,5.24070152990826,4.04593039154462,6.69492991375221,3.40282724579238,0,13.0481255748254,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0.864090018773596,1.58005560314089,32.6387596617164,20.0286366471413,8.96453678546786,8.59328139203911,5.36439657909415,4.80781798079875,3.2491695978407,2.82706059854813,2.89585865288999,1.31074040677893,2.14407337627455,2.21287235772758,3.27255326108393,0.226730383615211,0.665957860122194,3.22969883794113,0.167884616364078,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,20.549894821667,25.936616771067,7.85374586469017,3.8897074730927,6.70762120409543,4.41224420280034,2.00022055021454,2.47242068686673,4.1719497246936,1.01078884705519,1.77435509923168,2.82939512079114,3.09016974650612,3.3293079250532,3.79074095107048,1.90517476513229,3.47652977834566,3.08654752741928,1.64834360321323,2.35518272215036,1.37147700954166,2.48466128623072,1.43061713968393,2.18019624948493,2.54095327121393,2.28459441307527,1.64635175585495,1.31534855718921,2.71608227691724,1.68342681497322,2.37270036248348,3.25064791839359,3.27384834535751,2.47898945897546,3.2794123866794,9.49280196164194,3.04111090979031,3.43793686477277,0.956441660344217,1.10295709559758,1.62307484934295|short_description=p1@Six2}} | ||
|EntrezGene=20472 | |||
|HGNC= | |||
|MCL_coexpression_id=3122 | |||
|UniProt=Q62232,Q8BSP4 | |||
|association_with_transcript=0bp_to_ENSMUST00000024947,ENSMUST00000163568,NM_011380,uc008duc.2_5end | |||
|description=CAGE_peak_1_at_Six2_5end | |||
|id=chr17:86087592..86087615,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!2.36e-07!8;UBERON:0003296!2.36e-07!8;UBERON:0010133!2.36e-07!8;UBERON:0001894!6.33e-07!10;UBERON:0006222!6.33e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.19e-11,43;UBERON:0000007,4.15e-09,8;UBERON:0003296,4.15e-09,8;UBERON:0010133,4.15e-09,8;UBERON:0007811,1.72e-07,36;UBERON:0001894,9.96e-07,10;UBERON:0006222,9.96e-07,10 | |||
|phase1_expression=26.9050063136054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,12.0388322597812,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,0,0.606949382578793,0.528990979272033,0,9.14880236586657,27.5681386794453,0,0,0,9.58720353658895,9.22123932771731,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0.244981598429908,0.0958454710182364,0.919218786610021,0,0,0,0.131886287730194,0,1.04182674111352,0,0,0.61119299110724,0,0.142371680799103,0,0.984440513331393,1.20914496170857,0,0,0,0,0,0,3.65155492342555,0,0,0,31.4080826101998,0,0,0,3.68034769719064,4.30711771307668,3.0331466700887,1.02765491747154,0,0,3.29622120855658,0.608930956624282,1.38369298353635,0,0.117588707135705,0.125666591329675,0,0,0,2.42650274921114,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0.347648640384553,1.27857728665165,0.41557608911912,0.324482526135515,0,0.124406970610093,0,0.631325567659422,16.7855371421888,10.1156925950728,7.56260945182467,4.52114453507145,2.65342346690179,3.20284300712124,2.43624483855295,0.258703370739016,9.7005596819779,22.8818357003061,19.3546236580344,10.5213951565236,3.33656699070717,4.179025998266,2.26360350048738,0.796137067273973,0,0,0,1.24275463521301,0.469052119962192,0.180062061461015,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0.411618449517138,0,0,4.47905326123991,2.55460339046482,0.257734922644187,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,38.1232480915694,26.6199034380668,31.5581659884625,20.5687841123767,19.9771061782655,15.5701520156507,0,0,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,1.70542270593436,0.488894929326078,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30188947129183,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,1.32745138339963,0.485561272309963,0.302323556964751,0.754420319023592,0,0,0,0.363533729477506,0,0,0,0,9.19186935535228,33.671424583855,39.7131159213056,64.3011105094777,35.1133662611702,33.5333377091893,26.6569413375436,24.3571959291679,0,0,0,0,0,0.301564624640779,0.119372344003136,0,0,0,0,0.412773735926445,0,0,0,0,0,0,0,1.90934123603023,36.8531432522023,11.3858901591035,7.12835249423888,7.3180903605064,5.24070152990826,4.04593039154462,6.69492991375221,3.40282724579238,0,13.0481255748254,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0.864090018773596,1.58005560314089,32.6387596617164,20.0286366471413,8.96453678546786,8.59328139203911,5.36439657909415,4.80781798079875,3.2491695978407,2.82706059854813,2.89585865288999,1.31074040677893,2.14407337627455,2.21287235772758,3.27255326108393,0.226730383615211,0.665957860122194,3.22969883794113,0.167884616364078,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,20.549894821667,25.936616771067,7.85374586469017,3.8897074730927,6.70762120409543,4.41224420280034,2.00022055021454,2.47242068686673,4.1719497246936,1.01078884705519,1.77435509923168,2.82939512079114,3.09016974650612,3.3293079250532,3.79074095107048,1.90517476513229,3.47652977834566,3.08654752741928,1.64834360321323,2.35518272215036,1.37147700954166,2.48466128623072,1.43061713968393,2.18019624948493,2.54095327121393,2.28459441307527,1.64635175585495,1.31534855718921,2.71608227691724,1.68342681497322,2.37270036248348,3.25064791839359,3.27384834535751,2.47898945897546,3.2794123866794,9.49280196164194,3.04111090979031,3.43793686477277,0.956441660344217,1.10295709559758,1.62307484934295 | |||
|short_description=p1@Six2 | |||
}} |
Revision as of 15:32, 13 September 2013
Short description: | p1@Six2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Six2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3122 |
Association with transcript: | 0bp_to_ENSMUST00000024947, ENSMUST00000163568, NM_011380, uc008duc.2_5end |
EntrezGene: | Six2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 2.19e-11 | 43 |
pituitary gland | 4.15e-09 | 8 |
gland of diencephalon | 4.15e-09 | 8 |
neuroendocrine gland | 4.15e-09 | 8 |
craniocervical region | 1.72e-07 | 36 |
diencephalon | 9.96e-07 | 10 |
future diencephalon | 9.96e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.