Personal tools

UBERON:0003296

From FANTOM5_SSTAR

Jump to: navigation, search

Name:gland of diencephalon
Namespace:FANTOM
Definition:"A gland that is part of a diencephalon [Obol]." [OBOL:automatic]
Xrefs:
links:

EHDAA2:0000395
EHDAA:4475
EMAPA:16646
EMAPA:16897

VHOG:0000653
Synonyms: "between brain gland" EXACT [OBOL:automatic]
"diencephalon gland" EXACT [OBOL:automatic]
"gland of between brain" EXACT [OBOL:automatic]
"gland of interbrain" EXACT [OBOL:automatic]
"gland of mature diencephalon" EXACT [OBOL:automatic]
"interbrain gland" EXACT [OBOL:automatic]
"mature diencephalon gland" EXACT [OBOL:automatic]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0002530(gland),UBERON:0004121(ectoderm-derived structure)
part_of:UBERON:0001894(diencephalon)



Children

is a:UBERON:0000007 (pituitary gland),UBERON:0001905 (pineal body)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples
It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003296 (gland of diencephalon), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
2.57e-195FFCP PHASE1:Hg19::chr19:7979708..7979734,+#_041e7e095e0433a5f5e2a2f6abfd85afp@chr19:7979708..7979734, +
2.57e-195FFCP PHASE2:Hg19::chr19:7979708..7979734,+#_041e7e095e0433a5f5e2a2f6abfd85afp@chr19:7979708..7979734, +
1.0e-156FFCP PHASE1:Hg19::chr5:136328571..136328599,-#_a1bc2e9d68446f0c07516434f3605aeep11@SPOCK1
1.0e-156FFCP PHASE2:Hg19::chr5:136328571..136328599,-#_a1bc2e9d68446f0c07516434f3605aeep11@SPOCK1
1.5e-156FFCP PHASE2:Hg19::chr12:128210626..128210641,-#_b3480ceef493666046a1c06662b262ce-, p@chr12:128210626..128210641
1.5e-156FFCP PHASE1:Hg19::chr12:128210626..128210641,-#_b3480ceef493666046a1c06662b262cep@chr12:128210626..128210641, -
6.94e-147FFCP PHASE2:Hg19::chr19:7979644..7979653,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979644..7979653, +
6.94e-147FFCP PHASE1:Hg19::chr19:49520344..49520367,-#_3c7fe58ee68581c87674381e7310afbep1@LHB
6.94e-147FFCP PHASE2:Hg19::chr19:49519930..49519937,-#_3c7fe58ee68581c87674381e7310afbep@chr19:49519930..49519937, -
6.94e-147FFCP PHASE1:Hg19::chr19:7979677..7979703,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979677..7979703, +
6.94e-147FFCP PHASE2:Hg19::chr19:7979677..7979703,+#_3c7fe58ee68581c87674381e7310afbe+, p@chr19:7979677..7979703
6.94e-147FFCP PHASE2:Hg19::chr19:49520344..49520367,-#_3c7fe58ee68581c87674381e7310afbep1@LHB
6.94e-147FFCP PHASE1:Hg19::chr19:49519930..49519937,-#_3c7fe58ee68581c87674381e7310afbep@chr19:49519930..49519937, -
6.94e-147FFCP PHASE1:Hg19::chr19:7979644..7979653,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979644..7979653, +
2.79e-131FFCP PHASE2:Hg19::chr1:99693441..99693485,-#_162ecb6a52ab7532e623acb216eb7a11p@chr1:99693441..99693485, -
2.79e-131FFCP PHASE1:Hg19::chr1:99693441..99693485,-#_162ecb6a52ab7532e623acb216eb7a11p@chr1:99693441..99693485, -
1.07e-130FFCP PHASE1:Hg19::chr5:133772179..133772191,+#_19e6ecc5ca8f9d9c1a5a6040e217ff51p5@ENST00000513329
1.07e-130FFCP PHASE2:Hg19::chr5:133772179..133772191,+#_19e6ecc5ca8f9d9c1a5a6040e217ff51p5@ENST00000513329
1.0e-112FFCP PHASE1:Hg19::chr5:141783725..141783734,+#_daffbf8b60612fd06df6d1c34b4f6cf5p3@ENST00000443800
1.0e-112FFCP PHASE2:Hg19::chr5:141783725..141783734,+#_daffbf8b60612fd06df6d1c34b4f6cf5p3@ENST00000443800
1.76e-111FFCP PHASE2:Hg19::chr9:139096968..139096979,-#_547c296569933891330becae011cbbcap2@LHX3
1.76e-111FFCP PHASE1:Hg19::chr9:139096968..139096979,-#_547c296569933891330becae011cbbcap2@LHX3
8.91e-111FFCP PHASE2:Hg19::chr22:47126639..47126654,+#_5ace75054bf71479d5a1fef30ffee88bp@chr22:47126639..47126654, +
8.91e-111FFCP PHASE1:Hg19::chr22:47126639..47126654,+#_5ace75054bf71479d5a1fef30ffee88bp@chr22:47126639..47126654, +
2.76e-110FFCP PHASE1:Hg19::chr15:71228905..71228915,+#_0d9c0c5f5240b6aabfe6064862f91b93p17@LRRC49
2.76e-110FFCP PHASE2:Hg19::chr11:75194071..75194110,-#_0d9c0c5f5240b6aabfe6064862f91b93p@chr11:75194071..75194110, -
2.76e-110FFCP PHASE1:Hg19::chr11:75194071..75194110,-#_0d9c0c5f5240b6aabfe6064862f91b93p@chr11:75194071..75194110, -
2.76e-110FFCP PHASE2:Hg19::chr4:1233005..1233017,+#_0d9c0c5f5240b6aabfe6064862f91b93p@chr4:1233005..1233017, +
2.76e-110FFCP PHASE2:Hg19::chr15:71228905..71228915,+#_0d9c0c5f5240b6aabfe6064862f91b93p17@LRRC49
2.76e-110FFCP PHASE1:Hg19::chr4:1233005..1233017,+#_0d9c0c5f5240b6aabfe6064862f91b93p@chr4:1233005..1233017, +
5.02e-99FFCP PHASE2:Hg19::chr12:128210666..128210685,-#_e10f7ee5f323a23152e5a369cbcc8d74p@chr12:128210666..128210685, -
5.02e-99FFCP PHASE1:Hg19::chr12:128210666..128210685,-#_e10f7ee5f323a23152e5a369cbcc8d74p@chr12:128210666..128210685, -
1.38e-98FFCP PHASE2:Hg19::chr9:139095116..139095139,+#_09220a7a11d2f7f5871951de837e5d88p@chr9:139095116..139095139, +
1.38e-98FFCP PHASE1:Hg19::chr9:139095116..139095139,+#_09220a7a11d2f7f5871951de837e5d88p@chr9:139095116..139095139, +
1.55e-98FFCP PHASE1:Hg19::chr12:121088132..121088135,+#_86c8842de92bb34e78ab840208c7dc62p15@CABP1
1.55e-98FFCP PHASE2:Hg19::chr9:25264978..25265001,+#_86c8842de92bb34e78ab840208c7dc62p@chr9:25264978..25265001, +
1.55e-98FFCP PHASE2:Hg19::chr11:84530787..84530803,+#_86c8842de92bb34e78ab840208c7dc62p@chr11:84530787..84530803, +
1.55e-98FFCP PHASE2:Hg19::chr8:135473748..135473753,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:135473748..135473753, -
1.55e-98FFCP PHASE2:Hg19::chr17:61995410..61995414,-#_86c8842de92bb34e78ab840208c7dc62p@chr17:61995410..61995414, -
1.55e-98FFCP PHASE1:Hg19::chr16:18066399..18066411,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:18066399..18066411, -
1.55e-98FFCP PHASE1:Hg19::chrX:38147077..38147085,-#_86c8842de92bb34e78ab840208c7dc62p@chrX:38147077..38147085, -
1.55e-98FFCP PHASE2:Hg19::chr8:135515989..135515991,+#_86c8842de92bb34e78ab840208c7dc62p@chr8:135515989..135515991, +
1.55e-98FFCP PHASE2:Hg19::chr2:108616342..108616384,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:108616342..108616384, +
1.55e-98FFCP PHASE2:Hg19::chr8:116127086..116127103,+#_86c8842de92bb34e78ab840208c7dc62p@chr8:116127086..116127103, +
1.55e-98FFCP PHASE2:Hg19::chr8:87751918..87751928,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:87751918..87751928, -
1.55e-98FFCP PHASE2:Hg19::chr3:192894664..192894677,-#_86c8842de92bb34e78ab840208c7dc62p1@ENST00000414895
1.55e-98FFCP PHASE2:Hg19::chr12:6956383..6956390,+#_86c8842de92bb34e78ab840208c7dc62p@chr12:6956383..6956390, +
1.55e-98FFCP PHASE1:Hg19::chr10:123959529..123959547,+#_86c8842de92bb34e78ab840208c7dc62p@chr10:123959529..123959547, +
1.55e-98FFCP PHASE2:Hg19::chr3:54952432..54952459,-#_86c8842de92bb34e78ab840208c7dc62p@chr3:54952432..54952459, -
1.55e-98FFCP PHASE2:Hg19::chr16:21049173..21049231,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:21049173..21049231, -
1.55e-98FFCP PHASE1:Hg19::chr20:58401898..58401905,+#_86c8842de92bb34e78ab840208c7dc62p@chr20:58401898..58401905, +
1.55e-98FFCP PHASE2:Hg19::chr2:17185958..17185998,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:17185958..17185998, +
1.55e-98FFCP PHASE2:Hg19::chr7:9202487..9202498,-#_86c8842de92bb34e78ab840208c7dc62-, p@chr7:9202487..9202498
1.55e-98FFCP PHASE2:Hg19::chr4:1188439..1188454,-#_86c8842de92bb34e78ab840208c7dc62p@chr4:1188439..1188454, -
1.55e-98FFCP PHASE2:Hg19::chr1:240177602..240177607,+#_86c8842de92bb34e78ab840208c7dc62p17@FMN2
1.55e-98FFCP PHASE2:Hg19::chr5:135732675..135732680,-#_86c8842de92bb34e78ab840208c7dc62p3@ENST00000514282
1.55e-98FFCP PHASE1:Hg19::chr13:21399081..21399087,+#_86c8842de92bb34e78ab840208c7dc62p@chr13:21399081..21399087, +
1.55e-98FFCP PHASE1:Hg19::chrX:54051809..54051811,+#_86c8842de92bb34e78ab840208c7dc62p@chrX:54051809..54051811, +
1.55e-98FFCP PHASE2:Hg19::chr16:18036005..18036011,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:18036005..18036011, -
1.55e-98FFCP PHASE2:Hg19::chr8:99033417..99033423,+#_86c8842de92bb34e78ab840208c7dc62p17@MATN2
1.55e-98FFCP PHASE1:Hg19::chr1:240043364..240043366,+#_86c8842de92bb34e78ab840208c7dc62p@chr1:240043364..240043366, +
1.55e-98FFCP PHASE1:Hg19::chr2:17141934..17141935,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:17141934..17141935, +
1.55e-98FFCP PHASE1:Hg19::chr8:135472861..135472868,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:135472861..135472868, -
1.55e-98FFCP PHASE1:Hg19::chr7:31003621..31003641,+#_86c8842de92bb34e78ab840208c7dc62p3@GHRHR
1.55e-98FFCP PHASE2:Hg19::chr11:18067951..18067954,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:18067951..18067954, -
1.55e-98FFCP PHASE2:Hg19::chr8:135472861..135472868,-#_86c8842de92bb34e78ab840208c7dc62-, p@chr8:135472861..135472868
1.55e-98FFCP PHASE2:Hg19::chr6:22287787..22287798,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287787..22287798, -
1.55e-98FFCP PHASE1:Hg19::chr17:61996160..61996176,-#_86c8842de92bb34e78ab840208c7dc62p3@GH1
1.55e-98FFCP PHASE2:Hg19::chr7:9178350..9178369,-#_86c8842de92bb34e78ab840208c7dc62p@chr7:9178350..9178369, -
1.55e-98FFCP PHASE1:Hg19::chr6:22287815..22287820,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287815..22287820, -
1.55e-98FFCP PHASE2:Hg19::chr12:55422565..55422604,+#_86c8842de92bb34e78ab840208c7dc62p@chr12:55422565..55422604, +
1.55e-98FFCP PHASE1:Hg19::chr11:84530787..84530803,+#_86c8842de92bb34e78ab840208c7dc62p@chr11:84530787..84530803, +
1.55e-98FFCP PHASE1:Hg19::chr16:17930871..17930877,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:17930871..17930877, -
1.55e-98FFCP PHASE2:Hg19::chr17:61995906..61995914,-#_86c8842de92bb34e78ab840208c7dc62p6@AB591020
1.55e-98FFCP PHASE2:Hg19::chr20:44991864..44991887,-#_86c8842de92bb34e78ab840208c7dc62p10@SLC35C2
1.55e-98FFCP PHASE2:Hg19::chr7:120969099..120969104,+#_86c8842de92bb34e78ab840208c7dc62p3@WNT16
1.55e-98FFCP PHASE1:Hg19::chr12:6954834..6954841,+#_86c8842de92bb34e78ab840208c7dc62p9@GNB3
1.55e-98FFCP PHASE1:Hg19::chr2:17065916..17065929,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:17065916..17065929, +
1.55e-98FFCP PHASE1:Hg19::chr7:120842768..120842790,-#_86c8842de92bb34e78ab840208c7dc62p@chr7:120842768..120842790, -
1.55e-98FFCP PHASE2:Hg19::chr1:57907030..57907050,+#_86c8842de92bb34e78ab840208c7dc62p@chr1:57907030..57907050, +
1.55e-98FFCP PHASE2:Hg19::chr7:31003580..31003589,+#_86c8842de92bb34e78ab840208c7dc62p6@GHRHR
1.55e-98FFCP PHASE2:Hg19::chr6:22287619..22287636,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287619..22287636, -
1.55e-98FFCP PHASE1:Hg19::chr17:61995432..61995458,-#_86c8842de92bb34e78ab840208c7dc62p@chr17:61995432..61995458, -
1.55e-98FFCP PHASE2:Hg19::chr19:49519519..49519562,-#_86c8842de92bb34e78ab840208c7dc62p2@CU678753
1.55e-98FFCP PHASE2:Hg19::chrX:54051809..54051811,+#_86c8842de92bb34e78ab840208c7dc62p@chrX:54051809..54051811, +
1.55e-98FFCP PHASE1:Hg19::chr11:18040537..18040547,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:18040537..18040547, -
1.55e-98FFCP PHASE1:Hg19::chr6:22287647..22287662,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287647..22287662, -
1.55e-98FFCP PHASE2:Hg19::chr1:168250194..168250197,+#_86c8842de92bb34e78ab840208c7dc62p3@TBX19
1.55e-98FFCP PHASE1:Hg19::chr3:54952462..54952471,-#_86c8842de92bb34e78ab840208c7dc62p@chr3:54952462..54952471, -
1.55e-98FFCP PHASE1:Hg19::chr2:108602341..108602352,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:108602341..108602352, +
1.55e-98FFCP PHASE2:Hg19::chr14:49512240..49512248,-#_86c8842de92bb34e78ab840208c7dc62-, p@chr14:49512240..49512248
1.55e-98FFCP PHASE2:Hg19::chr17:74463608..74463612,+#_86c8842de92bb34e78ab840208c7dc62p5@AANAT
1.55e-98FFCP PHASE1:Hg19::chr13:68306577..68306607,+#_86c8842de92bb34e78ab840208c7dc62p@chr13:68306577..68306607, +
1.55e-98FFCP PHASE1:Hg19::chr7:9782610..9782613,+#_86c8842de92bb34e78ab840208c7dc62p@chr7:9782610..9782613, +
1.55e-98FFCP PHASE2:Hg19::chr3:130248948..130248959,+#_86c8842de92bb34e78ab840208c7dc62p@chr3:130248948..130248959, +
1.55e-98FFCP PHASE2:Hg19::chr12:89881337..89881342,-#_86c8842de92bb34e78ab840208c7dc62p@chr12:89881337..89881342, -
1.55e-98FFCP PHASE1:Hg19::chr19:7979665..7979675,+#_86c8842de92bb34e78ab840208c7dc62p@chr19:7979665..7979675, +
1.55e-98FFCP PHASE2:Hg19::chr8:135522475..135522486,-#_86c8842de92bb34e78ab840208c7dc62p16@ZFAT
1.55e-98FFCP PHASE2:Hg19::chr11:18041194..18041197,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:18041194..18041197, -
1.55e-98FFCP PHASE1:Hg19::chr20:44991864..44991887,-#_86c8842de92bb34e78ab840208c7dc62p10@SLC35C2

Retrieved from "http://f5-webapp2.gsc.riken.jp/5/sstar/index.php?title=UBERON:0003296&oldid=3277542"