FFCP PHASE1:Hg19::chr5:43483929..43484002,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64417|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26139|TSSclassifier=S|UniProt=Q0VDI3,D6RAV6,E9PBX6|association_with_transcript=0bp_to_ENST00000397080,ENST00000500337,ENST00000506860,ENST00000510130,ENST00000511525,ENST00000512085,NM_022483,uc003jnv.3,uc003jnx.2,uc003jny.2_5end|description=CAGE_peak_1_at_C5orf28_5end|id=chr5:43483929..43484002,-|ontology_enrichment_celltype=CL:0000057!1.16e-09!75;CL:0002620!3.05e-08!23|ontology_enrichment_celltype_v019=CL:0002620;2.16e-08;23|ontology_enrichment_celltype_v019_2=CL:0000057,7.91e-10,76;CL:0002620,3.05e-08,23|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!3.84e-18!239;DOID:162!5.60e-18!235;DOID:0050687!2.36e-14!143;DOID:305!4.40e-14!106;DOID:0050686!1.23e-07!137|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:14566,3.84e-18,239;DOID:162,5.60e-18,235;DOID:0050687,2.36e-14,143;DOID:305,4.40e-14,106;DOID:0050686,1.23e-07,137|ontology_enrichment_uberon=UBERON:0001737!2.05e-07!9;UBERON:0003102!4.83e-07!95|ontology_enrichment_uberon_v019=UBERON:0001737;2.01e-07;9!UBERON:0001557;2.01e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.54e-08,99;UBERON:0001737,2.05e-07,9|phase1_expression=37.6074245090052,19.6972481979704,37.4938714895283,29.0212565224078,26.8176656656373,34.8935409640147,5.06599756336621,11.370957721683,5.22371256399677,6.38908234903923,2.09340350391728,6.99012390816551,5.80287352102598,7.05468211872266,4.97096063591874,8.74022690387308,7.8350288643117,8.76372108464848,7.80692478064811,8.86471618152873,2.85600967741954,2.82109249330279,5.43848375549008,6.43309797842556,8.16027157366218,11.3091840506968,10.0162719128934,10.1536907894646,1.96682138424452,2.30297638858328,2.63187409637329,14.7107395916628,2.10844143144775,7.76483421350254,12.7820880957498,12.3687232264057,8.51441274071057,0.553995408531877,2.00544447470142,1.95309783644267,8.50878802111712,9.39291631455041,8.24241816429397,2.76256653681173,3.40088349319928,6.30718559088322,2.55671940596253,4.11167888021826,4.33588919253145,1.43846196161075,5.12321413058201,6.14853797710322,1.03423704220986,3.87290810150296,2.70852973188684,2.25890807451126,6.00393530127261,7.19115150224271,2.14258724659632,7.38136762275015,6.39337125799041,0.989553900560148,5.38551875578406,3.40979800426155,6.09439401120026,10.7803192691317,6.85104473895132,3.76872997885115,4.69334626578181,7.38442071997397,3.02699751316684,12.5214396235772,8.86094684834476,9.50648788403738,8.71677629856678,11.5312255029607,6.51506060649672,7.0583139635508,6.42902346788321,7.69534408101371,7.75775041076451,10.2291926108195,12.3197371122926,7.64594055766984,11.5636203002262,10.2415253415962,11.6114836240444,9.77079147922622,6.61044872784862,10.494591299889,3.41527781465669,3.52342313622563,3.82273228125229,3.96513985737078,5.04457706683382,14.2227405778542,4.13090517239049,3.93010762749165,4.31763147898969,13.7092926220356,9.45174573237412,9.9424039204294,13.6378709885538,10.8068143178618,10.0166008541445,8.4182879941776,7.31170432165542,7.94166182299186,9.88451041455075,12.3328428452757,11.3303507292198,13.6207450295475,11.7146384898028,13.6445822325754,7.31748666634838,10.0845315000834,8.04763036564035,10.3088233644789,12.9040042929946,10.5126586726952,14.9749194386976,11.4054245333805,13.8529109551551,17.2781925058465,13.742379920758,13.496303366509,9.85353596305256,4.43534835094411,2.67440195783507,3.91025890483557,2.43806866313962,4.02420515822182,8.95037932904712,27.469375581227,13.0347856765331,19.4094335407504,27.8350081467885,22.8718389042239,15.9763841007275,11.3081992705908,10.7158438545614,8.90657713384446,6.55731518926576,3.70784442784429,12.6573483525327,14.4527681958392,10.3707209204715,3.57735936458013,3.43196946468077,3.71457501329565,5.16782259153433,2.58070378531837,3.47140501607594,2.82653970962005,2.93649605346934,6.32771496462155,4.17989933073621,10.3366703667732,16.7210143462754,17.4054718637629,3.22263453687318,11.4040815857777,2.19655851793353,8.08858776760911,4.0507097394088,10.8052671223737,4.04152870727106,6.19363142658272,1.53316637465883,3.79706263827252,4.76324534219059,0,3.87780264148325,6.54141078213801,24.3516256330706,18.7413157263578,19.5965587603564,32.9862113861136,9.57604631935564,11.2135520028461,5.33744978648525,9.62003438826924,16.8053959115874,18.4553620735473,12.9134903459632,8.62737337576109,7.49028701823999,7.26396438684769,14.0472034573644,7.41613368007784,14.0481759718693,18.0849127911398,15.0541838262362,16.8540968042698,15.9240253578817,11.3007571926827,15.9121703010679,22.572054288359,15.8250834738276,8.19145225744224,2.87447256726495,11.7835279767846,10.0094815897571,21.0568727767979,12.7303510055443,15.324389789951,9.91571188783539,16.7879631076831,28.3435624388402,33.7420674333337,26.9153514472644,22.8069233024146,26.2783949558019,33.2356296658862,34.9899689903389,20.7594888656757,33.8106407909359,25.7482449728997,29.6400673628204,22.1455097841772,27.3357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9014,12.4220062067066,21.4762429051761,13.5447322389035,13.4109717480496,2.58971534875158,4.00384946739363,3.4794432940146,11.1713528403602,26.2012199077558,7.56012945613199,11.5352488054242,28.6883048378958,4.50756118656259,8.30295639616704,9.26089897295336,9.61662066217412,60.2006139342749,9.56078454840231,21.2108892391463,9.03018948728748,13.664134415046,8.453114551668,14.7836589778401,9.02245612606594,7.02590978911991,8.59493940954389,14.4628690270583,11.2926358949021,7.78341256884932,5.11235471772562,9.17458566809082,11.753845818419,23.034648080205,5.91525964660958,6.10890966476528,11.1095636508234,10.415860508669,15.7139713734682,22.9292077925608,7.82231833977489,8.63198018513195,3.80095503034311,12.6466148880057,9.35260918429462,8.82191035534511,12.2846694253264,9.09344378618873,10.9865293364033,11.6083721524229,9.72270161101815,11.301401040752,10.2367705529408,5.94217970491256,7.57311514409466,20.295867127091,32.2691092470296,17.9884298172815,9.14410341167238,10.2669990325584,9.56399152807143,10.9734974250795,8.98182962674236,14.4897818127535,19.9580136791328,1.9307228228694,18.054865623424,28.1569130884145,15.7691462995898,10.5793006362092,7.32332451604064,5.83694001413976,9.29648627679376|short_description=p1@C5orf28}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=64417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26139 | |||
|TSSclassifier=S | |||
|UniProt=Q0VDI3,D6RAV6,E9PBX6 | |||
|association_with_transcript=0bp_to_ENST00000397080,ENST00000500337,ENST00000506860,ENST00000510130,ENST00000511525,ENST00000512085,NM_022483,uc003jnv.3,uc003jnx.2,uc003jny.2_5end | |||
|description=CAGE_peak_1_at_C5orf28_5end | |||
|id=chr5:43483929..43484002,- | |||
|ontology_enrichment_celltype=CL:0000057!1.16e-09!75;CL:0002620!3.05e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.16e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.91e-10,76;CL:0002620,3.05e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.84e-18!239;DOID:162!5.60e-18!235;DOID:0050687!2.36e-14!143;DOID:305!4.40e-14!106;DOID:0050686!1.23e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.84e-18,239;DOID:162,5.60e-18,235;DOID:0050687,2.36e-14,143;DOID:305,4.40e-14,106;DOID:0050686,1.23e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.05e-07!9;UBERON:0003102!4.83e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.01e-07;9!UBERON:0001557;2.01e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.54e-08,99;UBERON:0001737,2.05e-07,9 | |||
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| |||
|short_description=p1@C5orf28 | |||
}} |
Revision as of 15:45, 13 September 2013
Short description: | p1@C5orf28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C5orf28_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397080, ENST00000500337, ENST00000506860, ENST00000510130, ENST00000511525, ENST00000512085, NM_022483, uc003jnv.3, uc003jnx.2, uc003jny.2_5end |
EntrezGene: | C5orf28 |
HGNC: | 26139 |
UniProt: | Q0VDI3D6RAV6E9PBX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.91e-10 | 76 |
skin fibroblast | 3.05e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.54e-08 | 99 |
larynx | 2.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.84e-18 | 239 |
cancer | 5.60e-18 | 235 |
cell type cancer | 2.36e-14 | 143 |
carcinoma | 4.40e-14 | 106 |
organ system cancer | 1.23e-07 | 137 |
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