FFCP PHASE1:Mm9::chr18:21160267..21160278,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56515|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=-179bp_to_uc008efd.1_5end|description=CAGE_peak_12_at_Rnf138_5end|id=chr18:21160267..21160278,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!2.21e-07!15;UBERON:0003101!6.64e-07!16;UBERON:0000079!6.64e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.00e-15,14;UBERON:0003135,5.92e-14,15;UBERON:0003101,3.85e-13,16;UBERON:0000079,3.85e-13,16;UBERON:0004176,2.01e-12,17;UBERON:0009196,2.01e-12,17;UBERON:0009117,2.01e-12,17;UBERON:0000991,8.74e-12,18;UBERON:0005564,8.74e-12,18;UBERON:0003133,4.63e-09,24;UBERON:0005156,1.99e-08,26;UBERON:0000990,1.99e-08,26|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0.468129052643987,0,0,0.171200729931206,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,32.694190443683,0,0,0,0,0,0,0,0.209718688851422,1.44950472495604,16.4177103566983,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p12@Rnf138}} | ||
|EntrezGene=56515 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt= | |||
|association_with_transcript=-179bp_to_uc008efd.1_5end | |||
|description=CAGE_peak_12_at_Rnf138_5end | |||
|id=chr18:21160267..21160278,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!2.21e-07!15;UBERON:0003101!6.64e-07!16;UBERON:0000079!6.64e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.00e-15,14;UBERON:0003135,5.92e-14,15;UBERON:0003101,3.85e-13,16;UBERON:0000079,3.85e-13,16;UBERON:0004176,2.01e-12,17;UBERON:0009196,2.01e-12,17;UBERON:0009117,2.01e-12,17;UBERON:0000991,8.74e-12,18;UBERON:0005564,8.74e-12,18;UBERON:0003133,4.63e-09,24;UBERON:0005156,1.99e-08,26;UBERON:0000990,1.99e-08,26 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0.468129052643987,0,0,0.171200729931206,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,32.694190443683,0,0,0,0,0,0,0,0.209718688851422,1.44950472495604,16.4177103566983,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@Rnf138 | |||
}} |
Revision as of 15:47, 13 September 2013
Short description: | p12@Rnf138 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Rnf138_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -179bp_to_uc008efd.1_5end |
EntrezGene: | Rnf138 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 7.00e-15 | 14 |
male reproductive organ | 5.92e-14 | 15 |
male organism | 3.85e-13 | 16 |
male reproductive system | 3.85e-13 | 16 |
external genitalia | 2.01e-12 | 17 |
indifferent external genitalia | 2.01e-12 | 17 |
indifferent gonad | 2.01e-12 | 17 |
gonad | 8.74e-12 | 18 |
gonad primordium | 8.74e-12 | 18 |
reproductive organ | 4.63e-09 | 24 |
reproductive structure | 1.99e-08 | 26 |
reproductive system | 1.99e-08 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.