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FFCP PHASE1:Mm9::chr18:38158368..38158425,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=106952|HGNC=|MCL_coexpression_id=922|UniProt=Q8R5G7|association_with_transcript=136bp_to_uc008err.2_5end|description=CAGE_peak_1_at_Arap3_5end|id=chr18:38158368..38158425,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!4.95e-09!66;UBERON:0002048!5.66e-09!14;UBERON:0000117!5.66e-09!14;UBERON:0000171!5.66e-09!14;UBERON:0000170!5.66e-09!14;UBERON:0005597!5.66e-09!14;UBERON:0000118!5.66e-09!14;UBERON:0000926!8.93e-09!193;UBERON:0004120!8.93e-09!193;UBERON:0006603!8.93e-09!193;UBERON:0005177!1.49e-08!85;UBERON:0005153!1.15e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005177,9.43e-10,79;UBERON:0009569,3.92e-09,66;UBERON:0002048,5.36e-09,14;UBERON:0000117,5.36e-09,14;UBERON:0000171,5.36e-09,14;UBERON:0000170,5.36e-09,14;UBERON:0005597,5.36e-09,14;UBERON:0000118,5.36e-09,14;UBERON:0002100,2.97e-08,90;UBERON:0005153,1.10e-07,17|phase1_expression=2.7225304007815,0,0,0,0,0.16787927191189,0.233612640595526,0.387369970324729,0,0,0,0,0,0,5.99597571268193,6.07425802169478,1.39912375625629,1.57731082679119,1.37114433605739,0.42438965179803,15.2227489370415,0.397163804803541,0.522399578277871,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,1.26015064879965,1.33038306393183,0,0.61506478758457,0,0,0,0,106.307034207175,57.0374801502374,54.446469373275,181.175298313552,172.810507694487,119.435546845664,0,0,0.183546752161682,0.782391344348039,0,0.219686182734472,0,0.279972843250725,0,0,0,0,2.05807548828758,6.87680255853016,1.03134418455488,3.43937983461316,3.70293685490423,1.90149421051854,1.35537812827653,0.889294796111139,42.7452365708665,54.3876499411836,41.2078466668738,24.2676089519908,14.6002956022191,2.59224030771194,4.72520784160917,4.20649922702764,4.85606673486466,5.74258206474195,1.83736198822431,2.1086003624012,2.75765635983006,4.40463523997555,3.95830748064082,3.5329502648936,4.2203612073662,3.20206752608434,3.12548022334056,2.23346399201105,2.25105044012672,3.36156145108982,7.07108605136802,3.70166370077668,3.16879057903011,5.2251073399897,15.3410267016775,140.584277020314,32.6961073252927,0,1.07940638327563,5.19821133958135,3.58421509677868,10.6737759300131,0,0,0,1.40843419776681,0,0,0,0,0.253359865475099,0,5.36664234679582,9.58070169494535,18.2583831049734,13.5318554877586,14.3098774806706,17.0655467969483,9.94769427647309,17.7558947774914,11.0586600370114,11.6181634835156,20.6777080395474,30.9613693182456,16.8237523945306,17.8881629952919,19.8798853785441,1.86391761218122,2.92780797011547,3.56059401582874,6.38642638021478,2.27648736561249,3.59941638596045,1.65191295194984,5.24267237916879,7.77751024791665,1.38219787324151,4.86708096538374,4.09144731728529,5.81806524766768,3.56930778749067,11.915205570487,20.5271501506653,3.53811861807145,4.8401626853889,6.24578126220978,6.66716102857071,6.48223667299257,5.87748789559289,6.32739442107349,5.76511741281824,5.99691037182265,10.0894314588216,5.82033580918674,9.8335161687266,9.32540958068929,14.0285268753648,10.2877482213471,17.4126083261083,15.4336602305958,13.1362616100206,2.80885274925294,3.86021860672073,3.40996199274711,25.6835957944022,18.7620847984877,22.3276956211658,33.8544971886851,25.9728785906573,23.6028682717689,22.0907247512887,24.681152928765,23.7033645005354,21.8864600384929,35.6243397051637,36.6431019147268,34.7955970072291,36.6648692536055,37.7120036716645,4.6263788684108,2.98423375899925,4.29544417878937,3.17340679996253,10.024547775156,12.0763069367428,13.5310834388198,15.1262643467507,16.2335972006755,14.8375988367796,7.59246498471219,7.5761519173045,9.29940272560997,9.35095418593409,11.1129529657898,8.08937467788799,7.13255564586491,5.17767310461355,11.569741958138,14.1668155636064,11.270773567308,19.1432248174595,18.0375813065892,18.0950415317022,20.6783476396321,16.3847264257358,16.9558626068685,14.8076596706161,8.89357881261447,8.67594549723689,10.614185736113,6.74586337154561,11.3601667977562,11.0941493486112,10.9489116266011,20.7141218964584,11.6737363278025,9.60964946158285,17.2521847832825,16.7463426450827,10.9213185590096,11.36604950762,7.53469136792031,9.16642690590398,70.575718643643,12.127450353311,22.6521317254416,21.5576258934489,23.4690248288502,40.033995528594,55.7022119673272,44.2953380637203,55.329935581273,43.4070791711599,59.3171739405852,70.1334986983359,60.4397436530635,73.6263708179894,7.53956419696361,12.5098307278303,15.7364567366092,7.45029215022778,5.45872005958493,4.21962071731931,0,14.3908428506493,0.94652465824877,0.390438744296638,0.646270193198397,0.955875191810208,3.7875774594007,1.13230612315533,0.809621403349789,3.50707029493574,1.58115111178609,6.74774764485795,13.0584878391607,14.7794451043822,11.4020871547503,14.0224604526655,5.30980553359851,10.1967867185092,13.9068836203785,9.6188590675508,20.6711325016541,19.0609791725235,14.7304127105886,13.0872142611902,10.6949213515416,8.84902922220285,12.6502330289999,3.09406629744561,7.83011093233712,7.74262704334634,9.57254259992383,14.3605813471167,15.6059405605201,13.9127677729615,11.6829804627506,13.700922710157,12.9069439435041,10.8034356140548,1.7642271844397,9.23363016472288,9.84933002845024,5.97097956788743,6.2073618881631,7.2221995887827,9.61886760878507,7.97328798645192,12.1318325366475,34.6729938178214,33.7054039812875,13.7508973613424,7.92826520781946,8.46479240864134,0.679913719975421,1.25956307091292,2.07299960706636,4.77335309007557,7.59206384594725,14.0290432317526,10.4765180597147,8.78170843260769,12.2283035697859,5.79916689454729,8.84391976261094,8.63794608547298,5.05498395837992,4.34937519160848,0.56369293868419,10.4661582230785,11.2511773510826,10.1114617938905,10.8494251721294,10.9821481569006,10.7968659554094,4.55715346953825,3.04092098834561,1.44950472495604,2.30424005006292,1.89606672376907,9.52808511863772,9.14127518766963,5.3267537420896,5.19177417435696,6.15912199821921,2.76449533895928,1.9199638532695,1.41353029927407,1.98137697303,1.51239277705261,2.0466154955348,0.962118416403295,0.701261413089414,10.2028672626845,3.10780334723691,3.85769583420746,3.52557694364565,6.76163579112667,15.9530104133505,11.721703953105,9.21784030039983,4.01257683228291,3.95326289831947,2.76195141904306,5.15605962095457,5.15559547031063,0,3.0215755895588,2.70009000092722,2.2516060161211,1.35942722695261,2.5888015587591,4.67043064128795,12.369771075432,9.21961471072325,13.8570828728928,7.54607385460736,11.3982975239009,15.3350242183115,21.6336810100839,20.859748623468,11.6240717411347,22.5596576902313,16.0332390178165,12.8288865233739,15.6221371867881,15.1629638042819,16.1939855036245,14.2537720912172,15.2398284166327,15.6592642305257,17.8110693362621,20.9150243955103,13.665637074269,14.0677352068919,16.2787986628208,14.6810633447916,15.7383170678518,16.4635175585495,19.7302283578382,14.3952360676613,19.0788372363631,16.9648075917569,13.8891320149544,11.867700251921,11.4653262477615,14.4679958235856,14.2392029424629,20.1181183263051,15.9004579995741,20.4678515313662,20.7355933972345,23.650519233283|short_description=p1@Arap3}}
|EntrezGene=106952
|HGNC=
|MCL_coexpression_id=922
|UniProt=Q8R5G7
|association_with_transcript=136bp_to_uc008err.2_5end
|description=CAGE_peak_1_at_Arap3_5end
|id=chr18:38158368..38158425,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!4.95e-09!66;UBERON:0002048!5.66e-09!14;UBERON:0000117!5.66e-09!14;UBERON:0000171!5.66e-09!14;UBERON:0000170!5.66e-09!14;UBERON:0005597!5.66e-09!14;UBERON:0000118!5.66e-09!14;UBERON:0000926!8.93e-09!193;UBERON:0004120!8.93e-09!193;UBERON:0006603!8.93e-09!193;UBERON:0005177!1.49e-08!85;UBERON:0005153!1.15e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0005177,9.43e-10,79;UBERON:0009569,3.92e-09,66;UBERON:0002048,5.36e-09,14;UBERON:0000117,5.36e-09,14;UBERON:0000171,5.36e-09,14;UBERON:0000170,5.36e-09,14;UBERON:0005597,5.36e-09,14;UBERON:0000118,5.36e-09,14;UBERON:0002100,2.97e-08,90;UBERON:0005153,1.10e-07,17
|phase1_expression=2.7225304007815,0,0,0,0,0.16787927191189,0.233612640595526,0.387369970324729,0,0,0,0,0,0,5.99597571268193,6.07425802169478,1.39912375625629,1.57731082679119,1.37114433605739,0.42438965179803,15.2227489370415,0.397163804803541,0.522399578277871,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,1.26015064879965,1.33038306393183,0,0.61506478758457,0,0,0,0,106.307034207175,57.0374801502374,54.446469373275,181.175298313552,172.810507694487,119.435546845664,0,0,0.183546752161682,0.782391344348039,0,0.219686182734472,0,0.279972843250725,0,0,0,0,2.05807548828758,6.87680255853016,1.03134418455488,3.43937983461316,3.70293685490423,1.90149421051854,1.35537812827653,0.889294796111139,42.7452365708665,54.3876499411836,41.2078466668738,24.2676089519908,14.6002956022191,2.59224030771194,4.72520784160917,4.20649922702764,4.85606673486466,5.74258206474195,1.83736198822431,2.1086003624012,2.75765635983006,4.40463523997555,3.95830748064082,3.5329502648936,4.2203612073662,3.20206752608434,3.12548022334056,2.23346399201105,2.25105044012672,3.36156145108982,7.07108605136802,3.70166370077668,3.16879057903011,5.2251073399897,15.3410267016775,140.584277020314,32.6961073252927,0,1.07940638327563,5.19821133958135,3.58421509677868,10.6737759300131,0,0,0,1.40843419776681,0,0,0,0,0.253359865475099,0,5.36664234679582,9.58070169494535,18.2583831049734,13.5318554877586,14.3098774806706,17.0655467969483,9.94769427647309,17.7558947774914,11.0586600370114,11.6181634835156,20.6777080395474,30.9613693182456,16.8237523945306,17.8881629952919,19.8798853785441,1.86391761218122,2.92780797011547,3.56059401582874,6.38642638021478,2.27648736561249,3.59941638596045,1.65191295194984,5.24267237916879,7.77751024791665,1.38219787324151,4.86708096538374,4.09144731728529,5.81806524766768,3.56930778749067,11.915205570487,20.5271501506653,3.53811861807145,4.8401626853889,6.24578126220978,6.66716102857071,6.48223667299257,5.87748789559289,6.32739442107349,5.76511741281824,5.99691037182265,10.0894314588216,5.82033580918674,9.8335161687266,9.32540958068929,14.0285268753648,10.2877482213471,17.4126083261083,15.4336602305958,13.1362616100206,2.80885274925294,3.86021860672073,3.40996199274711,25.6835957944022,18.7620847984877,22.3276956211658,33.8544971886851,25.9728785906573,23.6028682717689,22.0907247512887,24.681152928765,23.7033645005354,21.8864600384929,35.6243397051637,36.6431019147268,34.7955970072291,36.6648692536055,37.7120036716645,4.6263788684108,2.98423375899925,4.29544417878937,3.17340679996253,10.024547775156,12.0763069367428,13.5310834388198,15.1262643467507,16.2335972006755,14.8375988367796,7.59246498471219,7.5761519173045,9.29940272560997,9.35095418593409,11.1129529657898,8.08937467788799,7.13255564586491,5.17767310461355,11.569741958138,14.1668155636064,11.270773567308,19.1432248174595,18.0375813065892,18.0950415317022,20.6783476396321,16.3847264257358,16.9558626068685,14.8076596706161,8.89357881261447,8.67594549723689,10.614185736113,6.74586337154561,11.3601667977562,11.0941493486112,10.9489116266011,20.7141218964584,11.6737363278025,9.60964946158285,17.2521847832825,16.7463426450827,10.9213185590096,11.36604950762,7.53469136792031,9.16642690590398,70.575718643643,12.127450353311,22.6521317254416,21.5576258934489,23.4690248288502,40.033995528594,55.7022119673272,44.2953380637203,55.329935581273,43.4070791711599,59.3171739405852,70.1334986983359,60.4397436530635,73.6263708179894,7.53956419696361,12.5098307278303,15.7364567366092,7.45029215022778,5.45872005958493,4.21962071731931,0,14.3908428506493,0.94652465824877,0.390438744296638,0.646270193198397,0.955875191810208,3.7875774594007,1.13230612315533,0.809621403349789,3.50707029493574,1.58115111178609,6.74774764485795,13.0584878391607,14.7794451043822,11.4020871547503,14.0224604526655,5.30980553359851,10.1967867185092,13.9068836203785,9.6188590675508,20.6711325016541,19.0609791725235,14.7304127105886,13.0872142611902,10.6949213515416,8.84902922220285,12.6502330289999,3.09406629744561,7.83011093233712,7.74262704334634,9.57254259992383,14.3605813471167,15.6059405605201,13.9127677729615,11.6829804627506,13.700922710157,12.9069439435041,10.8034356140548,1.7642271844397,9.23363016472288,9.84933002845024,5.97097956788743,6.2073618881631,7.2221995887827,9.61886760878507,7.97328798645192,12.1318325366475,34.6729938178214,33.7054039812875,13.7508973613424,7.92826520781946,8.46479240864134,0.679913719975421,1.25956307091292,2.07299960706636,4.77335309007557,7.59206384594725,14.0290432317526,10.4765180597147,8.78170843260769,12.2283035697859,5.79916689454729,8.84391976261094,8.63794608547298,5.05498395837992,4.34937519160848,0.56369293868419,10.4661582230785,11.2511773510826,10.1114617938905,10.8494251721294,10.9821481569006,10.7968659554094,4.55715346953825,3.04092098834561,1.44950472495604,2.30424005006292,1.89606672376907,9.52808511863772,9.14127518766963,5.3267537420896,5.19177417435696,6.15912199821921,2.76449533895928,1.9199638532695,1.41353029927407,1.98137697303,1.51239277705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|short_description=p1@Arap3
}}

Revision as of 16:08, 13 September 2013

Short description:p1@Arap3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arap3_5end
Coexpression cluster:MCL_coexpression_mm9:922
Association with transcript: 136bp_to_uc008err.2_5end
EntrezGene:Arap3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arap3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8106.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H157.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H354.45
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9181.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2172.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4119.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C742.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E754.39
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D241.21
Mouse Microglia, donor1.CNhs12629.11718-123C824.27
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D95.23
Mouse Schwann, donor2.CNhs12573.11746-123F915.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3140.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F732.70
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H99.58
adrenal gland, adult.CNhs10508.49-24D718.26
adrenal gland, embryo E14.CNhs11038.406-44C513.53
adrenal gland, embryo E16.CNhs11004.1254-43D614.31
adrenal gland, embryo E17.CNhs11043.1263-45I117.07
adrenal gland, embryo E18.CNhs11026.1262-18F59.95
adrenal gland, neonate N00.CNhs11191.1311-23C117.76
adrenal gland, neonate N25.CNhs11223.1377-27I311.06
amnion, adult pregnant day17.5.CNhs10488.583-22A811.62
aorta, adult.CNhs10498.46-23H120.68
bone (os femoris), adult.CNhs10483.56-12G230.96
bone (os femoris), neonate N02.CNhs11227.1985-43F516.82
bone (os femoris), neonate N16.CNhs11225.1525-43A617.89
bone (os femoris), neonate N20.CNhs11195.1350-25C319.88
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H76.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A45.24
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.53
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C66.25
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C96.48
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C66.33
eyeball, neonate N01.CNhs11140.1532-43E75.77
eyeball, neonate N02.CNhs11205.1551-44G86.00
eyeball, neonate N16.CNhs11188.777-19A210.09
forelimb, embryo E11.CNhs10596.335-25E25.82
forelimb, embryo E12.CNhs10600.359-14H29.83
forelimb, embryo E13.CNhs10589.384-1E29.33
forelimb, embryo E14.CNhs10577.413-26A814.03
forelimb, embryo E15.CNhs11007.437-20E710.29
forelimb, embryo E17.CNhs10598.1517-43C417.41
forelimb, embryo E18.CNhs11008.1520-43B515.43
gonad, embryo E13.CNhs11044.1564-45I613.14
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E925.68
heart, embryo E12.CNhs11015.353-12F518.76
heart, embryo E13.CNhs11013.376-3I922.33
heart, embryo E14.CNhs10597.403-26D433.85
heart, embryo E15.CNhs11017.431-16C825.97
heart, embryo E16.CNhs11021.457-17C623.60
heart, embryo E17.CNhs11025.479-18E522.09
heart, embryo E18.CNhs11030.1283-20G324.68
heart, neonate N00.CNhs11213.639-21E323.70
heart, neonate N03.CNhs11221.1349-25I221.89
heart, neonate N10.CNhs11118.749-24G135.62
heart, neonate N16.CNhs11209.782-15G136.64
heart, neonate N20.CNhs11127.821-26I634.80
heart, neonate N25.CNhs11196.1351-25D336.66
heart, neonate N30.CNhs11202.1390-42D237.71
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I510.02
intestine, embryo E13.CNhs11010.381-16D512.08
intestine, embryo E15.CNhs10602.976-16D813.53
intestine, embryo E16.CNhs10585.463-22H415.13
intestine, embryo E17.CNhs10582.482-18D316.23
intestine, embryo E18.CNhs10526.1289-20F714.84
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E97.58
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A511.11
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E37.13
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I911.57
kidney, embryo E15.CNhs10997.434-16F814.17
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I219.14
kidney, embryo E18.CNhs11001.1288-20C718.04
kidney, neonate N00.CNhs11214.646-21G718.10
kidney, neonate N10.CNhs11206.758-6D520.68
kidney, neonate N20.CNhs11113.832-19I116.38
kidney, neonate N25.CNhs11122.1353-25F316.96
kidney, neonate N30.CNhs11203.1385-42H114.81
liver, adult pregnant day01.CNhs10466.508-5B28.89
liver, embryo E12.CNhs10601.355-15F88.68
liver, embryo E13.CNhs10524.378-3H610.61
liver, embryo E14.CNhs10594.409-16E16.75
liver, embryo E15.CNhs10520.433-16D711.36
liver, embryo E16.CNhs10523.462-17F511.09
liver, embryo E17.CNhs10510.481-18A310.95
liver, embryo E18.CNhs10579.499-43G420.71
liver, neonate N00.CNhs11117.641-24F411.67
liver, neonate N03.CNhs11123.1345-25G29.61
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H216.75
liver, neonate N10.CNhs11115.751-24B910.92
liver, neonate N20.CNhs11220.823-25A311.37
liver, neonate N25.CNhs11198.1368-26H17.53
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B170.58
lung, embryo E12.CNhs10522.354-16G212.13
lung, embryo E14.CNhs10604.404-26F822.65
lung, embryo E15.CNhs11020.432-17C521.56
lung, embryo E16.CNhs10998.458-17B623.47
lung, embryo E17.CNhs10605.480-44A640.03
lung, embryo E18.CNhs10583.1287-20I655.70
lung, neonate N00.CNhs11224.640-42C644.30
lung, neonate N06.CNhs11212.683-20E555.33
lung, neonate N07.CNhs11111.715-19A343.41
lung, neonate N10.CNhs11219.750-23E659.32
lung, neonate N20.CNhs11109.822-18A470.13
lung, neonate N25.CNhs11119.1359-25C760.44
lung, neonate N30.CNhs11133.1394-42H273.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A112.51
mammary gland, adult lactating day02.CNhs10480.595-22B615.74
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.39
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I713.06
ovary, embryo E18.CNhs11040.505-44H714.78
ovary, neonate N00.CNhs11217.1299-22I411.40
oviduct, adult pregnant day01.CNhs10500.988-6G614.02
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F410.20
pancreas, embryo E15.CNhs11042.1556-45F213.91
pancreas, embryo E16.CNhs11003.460-26E59.62
pancreas, embryo E17.CNhs10599.1558-45G320.67
pancreas, embryo E18.CNhs10580.1535-43I719.06
pancreas, neonate N00.CNhs11105.645-26G914.73
pancreas, neonate N01.CNhs11138.1531-43D713.09
pancreas, neonate N02.CNhs11139.1539-43D810.69
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E67.74
pituitary gland, embryo E13.CNhs11009.370-44C79.57
pituitary gland, embryo E14.CNhs11037.398-44A514.36
pituitary gland, embryo E15.CNhs10592.427-16B915.61
pituitary gland, embryo E16.CNhs11036.449-43F613.91
pituitary gland, embryo E17.CNhs11039.1265-44F511.68
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I712.91
placenta, adult pregnant day17.CNhs10464.577-18G310.80
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C39.23
skin, neonate N00.CNhs11124.650-25G49.85
skin, neonate N03.CNhs11215.662-22H35.97
skin, neonate N06.CNhs11097.693-20I56.21
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I19.62
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G212.13
spleen, embryo E16.CNhs11035.461-43C134.67
spleen, embryo E18.CNhs11011.1271-21F233.71
spleen, neonate N10.CNhs11116.752-24D113.75
spleen, neonate N20.CNhs11112.824-19H17.93
spleen, neonate N25.CNhs11099.1354-25G38.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E37.59
stomach, embryo E15.CNhs10603.1252-16G814.03
stomach, embryo E16.CNhs11022.459-17D410.48
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C612.23
stomach, neonate N03.CNhs11193.1340-24B85.80
stomach, neonate N07.CNhs11210.718-18A98.84
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I15.05
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F510.47
testis, embryo E15.CNhs11034.443-27C511.25
testis, embryo E16.CNhs11033.470-26G510.11
testis, embryo E17.CNhs11029.486-18I510.85
testis, embryo E18.CNhs11027.503-18G510.98
testis, neonate N00.CNhs11189.1300-22B710.80
testis, neonate N07.CNhs11222.726-26I44.56
testis, neonate N10.CNhs11204.763-44D93.04
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I29.14
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B410.20
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.86
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E46.76
uterus, adult pregnant day19.CNhs10497.590-15F515.95
uterus, adult.CNhs10509.92-27E511.72
vagina, adult.CNhs10502.89-27D59.22
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I84.67
whole body, embryo E12.CNhs10587.857-27C912.37
whole body, embryo E13.CNhs10512.372-23H29.22
whole body, embryo E14.5.CNhs10578.420-27D213.86
whole body, embryo E14.CNhs10519.395-14B17.55
whole body, embryo E16.CNhs10514.453-14F211.40
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.63
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.86
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.62
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G522.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.03
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.83
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.25
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.81
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.96
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.47
whole body, embryo E17.5.CNhs10513.490-9F914.47
whole body, embryo E17.CNhs10517.475-3I514.24
whole body, embryo E18.CNhs10516.493-3B320.12
whole body, neonate N00.CNhs10525.657-19C215.90
whole body, neonate N01.CNhs10576.659-23C620.47
whole body, neonate N06.CNhs10515.692-21D120.74
whole body, neonate N10.CNhs10518.761-6B423.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element9.43e-1079
subdivision of trunk3.92e-0966
lung5.36e-0914
respiratory tube5.36e-0914
respiration organ5.36e-0914
pair of lungs5.36e-0914
lung primordium5.36e-0914
lung bud5.36e-0914
trunk2.97e-0890
epithelial bud1.10e-0717







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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