FFCP PHASE1:Mm9::chr18:47407773..47407806,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2241|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:47407773..47407806,-|id=chr18:47407773..47407806,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.87e-13!333;UBERON:0000922!1.40e-11!328;UBERON:0002346!3.11e-07!71;UBERON:0003075!3.11e-07!71;UBERON:0007284!3.11e-07!71;UBERON:0003056!8.54e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000922,3.62e-09,320;UBERON:0002346,2.36e-07,64;UBERON:0003075,2.36e-07,64;UBERON:0007284,2.36e-07,64|phase1_expression=0.480446541314382,1.39590163055744,2.27499619694768,3.62957053568196,3.50627010962443,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0.639969691173627,0.45881856213434,0,0,1.50829862880122,1.71021077510736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,3.85448179539531,0,0.872100625521786,0,1.55543919259427,0.419959264876088,0,0,0,0,0.514518872071894,0,0,4.24864567805155,7.93486468908049,8.87363964908651,0,0,0,0,0,0.299600110518405,1.15265491596466,2.07379224616955,1.62007125998029,2.3135745748652,6.85562362569129,4.19650227808066,0.979926393719632,1.62937300731002,1.83843757322004,1.10115880999389,7.15049093277051,8.44835932909339,3.56092976871523,5.94669683415663,7.8137005583514,1.67509799400829,0.56276261003168,3.81995619442025,12.9636577608414,6.12198227436143,3.16879057903011,0.37863096666592,1.28471652181535,4.92769630792852,0,0,0.539703191637817,1.94932925234301,0.448026887097336,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0.5709193985953,0.517875767294343,0,2.77576522825817,2.13125834818499,2.07553947530453,1.20578112442098,2.93971767839262,0.879666139307728,2.47194967734374,1.01219549843938,0,2.42650274921114,3.5334642953663,2.42437626567611,1.86391761218122,3.80615036115011,2.09446706813455,4.08731288333746,0,0,0,2.99581278809645,0.915001205637253,4.77486538028885,1.56441888173049,2.30143911597297,1.87009240103604,5.84068547043927,5.39748628406676,0.622034853050465,0.252722758433675,1.05220927943237,10.4096354370163,0.459804208866946,3.96136685571768,9.0422890701429,5.44291993210623,8.71173297936978,4.12287588062807,9.05461797586555,3.44908788692548,5.67318240503458,4.75068035242662,2.84954452155847,10.5657954705727,3.1342694986995,3.2925141825271,4.37875387000685,0,0,0,0.621377317606506,2.34526059981096,1.44049649168812,1.18372367792605,1.57411385397923,3.85667782218446,5.8133486187602,0.536546802799238,2.56883753207773,1.6455984991348,7.71587081171748,3.72916523910936,1.90059983652932,3.29325172936576,1.61047702512446,1.68231958851302,9.8788427884113,8.92130714056255,7.1401652999157,6.61193576659225,9.28946687441754,1.15980715189884,4.84040459096022,3.7804267453628,5.89699440948933,7.11793592316767,11.5289268306808,14.0747716928151,9.35095418593409,8.96834800747953,9.88701349519644,6.91641759599022,3.98282546508734,1.32767530667157,3.99869794134051,3.38123207019241,6.10953983535943,5.62462212786115,4.48869247298039,3.09859031908861,1.18088118383682,2.82597710114475,0.493588655687202,0.592905254174298,0.166845105716094,0.393117990226406,0.899448449539415,0.405720242777006,1.20588579876208,0.25462585178142,1.15078454980324,1.29708181420028,2.47105271869273,25.8782771749238,3.34926852901653,4.05648975048929,2.02063102357689,0.896987067609561,0.482443521363367,4.61882975416512,0.568474235311454,1.95557971730431,3.22515662972857,3.28566347603903,2.68010011906905,5.95109102215034,8.19561321002755,5.35959489961049,18.1601045511995,12.5969267239415,14.4199716949849,12.0879487306127,6.79850575333104,0,0,0.983528546038072,0.827810238914197,1.9266070798535,2.69586879162067,0,1.26235463602186,1.26203287766503,0.390438744296638,1.29254038639679,2.15071918157297,1.55959071857676,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,2.57057053137446,0.709700426041343,3.73937767701236,3.4206261464251,2.63952196756057,1.32745138339963,5.34117399540959,1.209294227859,2.45186603682668,1.77181135728464,0.922305443831782,1.80899805217755,0.727067458955011,1.06949213515416,0.948110273807448,0,1.03135543248187,0.340439605753788,5.221771726908,4.65691261617916,1.28602221018955,1.06404140185364,4.10248280484762,4.44282355625727,1.522324745573,8.21350978222986,0.847328283455281,0,1.48397627647332,1.93757312035087,1.44751019827574,1.79058516004705,2.46211349617592,7.86998258900597,4.63563255026274,0.341741761595705,2.47664241555867,3.51869602002452,1.13021074202815,0.410082683163076,0.457556346413045,0,0,0,1.90934123603023,1.26534397432454,2.64315307264903,3.56417624711944,4.18176592028937,3.27543845619266,2.29269388854195,2.23164330458407,2.6175594198403,3.11075935900303,0,0.56369293868419,1.34564891439581,0.496375471371293,0.777804753376191,0.904118764344118,4.05494701177868,2.69921648885234,1.0416350787516,0.104859344425711,0.241584120826006,0.288030006257865,0,1.2163512917409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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2241 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:47407773..47407806,- | |||
|id=chr18:47407773..47407806,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.87e-13!333;UBERON:0000922!1.40e-11!328;UBERON:0002346!3.11e-07!71;UBERON:0003075!3.11e-07!71;UBERON:0007284!3.11e-07!71;UBERON:0003056!8.54e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,3.62e-09,320;UBERON:0002346,2.36e-07,64;UBERON:0003075,2.36e-07,64;UBERON:0007284,2.36e-07,64 | |||
|phase1_expression=0.480446541314382,1.39590163055744,2.27499619694768,3.62957053568196,3.50627010962443,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0.639969691173627,0.45881856213434,0,0,1.50829862880122,1.71021077510736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,3.85448179539531,0,0.872100625521786,0,1.55543919259427,0.419959264876088,0,0,0,0,0.514518872071894,0,0,4.24864567805155,7.93486468908049,8.87363964908651,0,0,0,0,0,0.299600110518405,1.15265491596466,2.07379224616955,1.62007125998029,2.3135745748652,6.85562362569129,4.19650227808066,0.979926393719632,1.62937300731002,1.83843757322004,1.10115880999389,7.15049093277051,8.44835932909339,3.56092976871523,5.94669683415663,7.8137005583514,1.67509799400829,0.56276261003168,3.81995619442025,12.9636577608414,6.12198227436143,3.16879057903011,0.37863096666592,1.28471652181535,4.92769630792852,0,0,0.539703191637817,1.94932925234301,0.448026887097336,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0.5709193985953,0.517875767294343,0,2.77576522825817,2.13125834818499,2.07553947530453,1.20578112442098,2.93971767839262,0.879666139307728,2.47194967734374,1.01219549843938,0,2.42650274921114,3.5334642953663,2.42437626567611,1.86391761218122,3.80615036115011,2.09446706813455,4.08731288333746,0,0,0,2.99581278809645,0.915001205637253,4.77486538028885,1.56441888173049,2.30143911597297,1.87009240103604,5.84068547043927,5.39748628406676,0.622034853050465,0.252722758433675,1.05220927943237,10.4096354370163,0.459804208866946,3.96136685571768,9.0422890701429,5.44291993210623,8.71173297936978,4.12287588062807,9.05461797586555,3.44908788692548,5.67318240503458,4.75068035242662,2.84954452155847,10.5657954705727,3.1342694986995,3.2925141825271,4.37875387000685,0,0,0,0.621377317606506,2.34526059981096,1.44049649168812,1.18372367792605,1.57411385397923,3.85667782218446,5.8133486187602,0.536546802799238,2.56883753207773,1.6455984991348,7.71587081171748,3.72916523910936,1.90059983652932,3.29325172936576,1.61047702512446,1.68231958851302,9.8788427884113,8.92130714056255,7.1401652999157,6.61193576659225,9.28946687441754,1.15980715189884,4.84040459096022,3.7804267453628,5.89699440948933,7.11793592316767,11.5289268306808,14.0747716928151,9.35095418593409,8.96834800747953,9.88701349519644,6.91641759599022,3.98282546508734,1.32767530667157,3.99869794134051,3.38123207019241,6.10953983535943,5.62462212786115,4.48869247298039,3.09859031908861,1.18088118383682,2.82597710114475,0.493588655687202,0.592905254174298,0.166845105716094,0.393117990226406,0.899448449539415,0.405720242777006,1.20588579876208,0.25462585178142,1.15078454980324,1.29708181420028,2.47105271869273,25.8782771749238,3.34926852901653,4.05648975048929,2.02063102357689,0.896987067609561,0.482443521363367,4.61882975416512,0.568474235311454,1.95557971730431,3.22515662972857,3.28566347603903,2.68010011906905,5.95109102215034,8.19561321002755,5.35959489961049,18.1601045511995,12.5969267239415,14.4199716949849,12.0879487306127,6.79850575333104,0,0,0.983528546038072,0.827810238914197,1.9266070798535,2.69586879162067,0,1.26235463602186,1.26203287766503,0.390438744296638,1.29254038639679,2.15071918157297,1.55959071857676,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,2.57057053137446,0.709700426041343,3.73937767701236,3.4206261464251,2.63952196756057,1.32745138339963,5.34117399540959,1.209294227859,2.45186603682668,1.77181135728464,0.922305443831782,1.80899805217755,0.727067458955011,1.06949213515416,0.948110273807448,0,1.03135543248187,0.340439605753788,5.221771726908,4.65691261617916,1.28602221018955,1.06404140185364,4.10248280484762,4.44282355625727,1.522324745573,8.21350978222986,0.847328283455281,0,1.48397627647332,1.93757312035087,1.44751019827574,1.79058516004705,2.46211349617592,7.86998258900597,4.63563255026274,0.341741761595705,2.47664241555867,3.51869602002452,1.13021074202815,0.410082683163076,0.457556346413045,0,0,0,1.90934123603023,1.26534397432454,2.64315307264903,3.56417624711944,4.18176592028937,3.27543845619266,2.29269388854195,2.23164330458407,2.6175594198403,3.11075935900303,0,0.56369293868419,1.34564891439581,0.496375471371293,0.777804753376191,0.904118764344118,4.05494701177868,2.69921648885234,1.0416350787516,0.104859344425711,0.241584120826006,0.288030006257865,0,1.21635129174099,1.23253148597793,1.42912905275575,0.716106782669926,0.198681354781265,0.360586348559907,0.590758108698309,0.302899349844443,0.381034033274999,0.201652370273681,0.292373642219257,0.0962118416403295,0.350630706544707,1.58711268530648,0.221985953374065,0.986852422704233,1.67884616364078,0.579568782096571,1.12609485270709,3.11357761254351,0.857473516316263,0,20.8958181768315,8.74617949363636,19.4784474569395,5.15559547031063,2.74033007908257,6.7985450765073,3.37511250115903,2.70192721934532,2.26571204492102,3.62432218226274,4.25528125095124,7.18244772121856,2.04880326904961,3.40349403895612,0.209613162627982,0.551530525350042,2.6669607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| |||
|short_description=p@chr18:47407773..47407806,- | |||
}} | |||
Revision as of 16:17, 13 September 2013
| Short description: | p@chr18:47407773..47407806, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr18:47407773..47407806, - |
| Coexpression cluster: | MCL_coexpression_mm9:2241 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryo | 3.62e-09 | 320 |
| neurectoderm | 2.36e-07 | 64 |
| neural plate | 2.36e-07 | 64 |
| presumptive neural plate | 2.36e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
