FFCP PHASE1:Mm9::chr18:61825138..61825156,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=622|UniProt=|association_with_transcript=34bp_to_ENSMUST00000154522,uc008fcj.1_5end|description=CAGE_peak_1_at_ENSMUST00000154522_5end,CAGE_peak_1_at_uc008fcj.1_5end|id=chr18:61825138..61825156,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!1.99e-09!57;UBERON:0005153!1.09e-08!17;UBERON:0002048!5.11e-08!14;UBERON:0000117!5.11e-08!14;UBERON:0000171!5.11e-08!14;UBERON:0000170!5.11e-08!14;UBERON:0005597!5.11e-08!14;UBERON:0000118!5.11e-08!14;UBERON:0000479!1.85e-07!349;UBERON:0000468!3.62e-07!333;UBERON:0000945!4.29e-07!16;UBERON:0010039!4.29e-07!16;UBERON:0005156!7.70e-07!26;UBERON:0000990!7.70e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0005153,9.20e-09,17;UBERON:0002048,4.38e-08,14;UBERON:0000117,4.38e-08,14;UBERON:0000171,4.38e-08,14;UBERON:0000170,4.38e-08,14;UBERON:0005597,4.38e-08,14;UBERON:0000118,4.38e-08,14;UBERON:0005157,1.18e-07,20;UBERON:0000945,3.76e-07,16;UBERON:0010039,3.76e-07,16;UBERON:0000479,7.42e-07,349;UBERON:0005156,8.87e-07,26;UBERON:0000990,8.87e-07,26|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,0.607425802169478,0.699561878128147,0,0,0,12.9265801029626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29484089877886,11.7597240214637,10.8292583775392,7.82391344348039,0,0.219686182734472,0.388859798148567,0.55994568650145,0,0,0,0,7.71778308107841,17.4785398362642,18.5641953219879,0.606949382578793,0.528990979272033,0.633831403506179,7.45457970552091,6.22506357277798,0.899899717281399,2.96659908770092,1.4209602298922,2.39680088414724,1.15265491596466,1.24427534770173,1.08004750665353,1.05162480675691,0,1.10434270475807,0.734944795289724,0.958454710182364,0,2.20231761998777,1.91531007127782,1.84327839907492,1.05509030184155,0.823388792421687,0.52091337055676,1.3959149950069,3.93933827022176,3.51435969886663,1.47314292736834,1.70846016958924,1.1183966749518,0.227178579999552,0.302286240427142,2.89864488701678,12.0459342777394,0,0,1.29955283489534,0.896053774194671,4.35377702408431,13.2935651610885,11.1707981979234,20.1403557470894,0,15.3991772897181,2.54805239706646,7.11066703153331,0,0,0,3.53970027129086,6.73238497482646,8.31275978763019,3.64319186208885,2.13125834818499,4.38169444786511,6.17962826265753,6.70255630673517,5.52933001850572,10.3821886448437,22.4129003225863,2.65383165584962,8.25010934731787,9.27534377533653,10.1823803158397,11.1835056730873,3.22058876712702,3.14170060220183,14.5610521468897,0,0,0,2.24685959107234,2.74500361691176,0.628271760564322,2.9550134432687,2.55715457330331,4.1557608911912,3.89379031362618,22.2009813193689,17.9146037678534,9.85618757891331,5.89237196482127,0.910843100738926,1.60931473103431,1.0803727788321,5.42537344208574,4.83059143974428,4.35586648968489,3.09215691047105,8.79591460512653,0.215567992932842,1.32374256117473,1.75951124163949,1.97276159184817,2.50242524303038,4.87553033131033,5.76189981942242,10.3497818745616,0,0,0,1.24275463521301,2.34526059981096,3.6012412292203,5.68187365404505,3.93528463494808,6.63348585415727,6.97601834251224,7.51165523918934,8.52386999280337,9.70903114489535,14.4467368389604,16.6191059569004,19.0059983652932,14.2707574939183,14.4942932261202,3.15434922846191,0.720332286654991,0.330418782983798,11.3713743665324,30.9267963276089,50.6275944655756,33.5055399437443,30.8575792673714,34.24621875211,28.5338439168839,27.9972146311262,19.4344766574333,42.2243150784453,36.8069473276129,45.0367041245168,25.1669434423182,30.9077411320813,27.2823544358483,5.50036912763937,6.05517116831563,11.270773567308,8.34970444165788,14.5464365375719,15.850695295212,17.7694669319163,15.7942858338174,16.4848664233444,11.8461277364928,3.85388415213294,1.66845105716094,3.34150291692445,2.02375901146368,1.62288097110802,1.4470629585145,2.5462585178142,5.4662266115654,1.45921704097532,4.66754402419738,4.31304619582064,6.32639611036456,5.61667811606209,8.08252409430758,4.12614051100398,4.3419916922703,14.7802552133284,10.9905018826881,25.259571348514,20.0299201214722,26.0506175600237,34.6737952904559,24.9945822930314,33.1727201358258,39.4087860265477,41.8568263436185,49.2715235151635,38.5078789581984,22.4490476425664,26.9047248961612,0,0,12.2941068254759,28.1455481230827,3.69266356971921,3.98519734413491,0.655739781506702,15.6531974866711,4.10160685241134,5.0757036758563,3.87762115919038,0,0.668396022247182,0.566153061577665,6.8817819284732,6.13737301613755,4.34816555741176,3.21321316421807,46.8402281187286,7.83488656135923,17.1031307321255,101.951535997027,3.98235415019888,3.64170954232472,4.53485335447127,4.52652191414155,5.31543407185391,8.9156192903739,16.2809824695979,10.5424781548477,7.48644494607915,23.0706833293146,6.32511651449993,6.18813259489121,2.04263763452273,2.88097750450096,2.45781499187234,1.92903331528433,4.25616560741457,2.49716344642899,2.79733335023606,2.13125464380219,2.81606049676452,4.66030555900404,8.82113592219848,6.7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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=622 | |||
|UniProt= | |||
|association_with_transcript=34bp_to_ENSMUST00000154522,uc008fcj.1_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000154522_5end,CAGE_peak_1_at_uc008fcj.1_5end | |||
|id=chr18:61825138..61825156,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!1.99e-09!57;UBERON:0005153!1.09e-08!17;UBERON:0002048!5.11e-08!14;UBERON:0000117!5.11e-08!14;UBERON:0000171!5.11e-08!14;UBERON:0000170!5.11e-08!14;UBERON:0005597!5.11e-08!14;UBERON:0000118!5.11e-08!14;UBERON:0000479!1.85e-07!349;UBERON:0000468!3.62e-07!333;UBERON:0000945!4.29e-07!16;UBERON:0010039!4.29e-07!16;UBERON:0005156!7.70e-07!26;UBERON:0000990!7.70e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,9.20e-09,17;UBERON:0002048,4.38e-08,14;UBERON:0000117,4.38e-08,14;UBERON:0000171,4.38e-08,14;UBERON:0000170,4.38e-08,14;UBERON:0005597,4.38e-08,14;UBERON:0000118,4.38e-08,14;UBERON:0005157,1.18e-07,20;UBERON:0000945,3.76e-07,16;UBERON:0010039,3.76e-07,16;UBERON:0000479,7.42e-07,349;UBERON:0005156,8.87e-07,26;UBERON:0000990,8.87e-07,26 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,0.607425802169478,0.699561878128147,0,0,0,12.9265801029626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29484089877886,11.7597240214637,10.8292583775392,7.82391344348039,0,0.219686182734472,0.388859798148567,0.55994568650145,0,0,0,0,7.71778308107841,17.4785398362642,18.5641953219879,0.606949382578793,0.528990979272033,0.633831403506179,7.45457970552091,6.22506357277798,0.899899717281399,2.96659908770092,1.4209602298922,2.39680088414724,1.15265491596466,1.24427534770173,1.08004750665353,1.05162480675691,0,1.10434270475807,0.734944795289724,0.958454710182364,0,2.20231761998777,1.91531007127782,1.84327839907492,1.05509030184155,0.823388792421687,0.52091337055676,1.3959149950069,3.93933827022176,3.51435969886663,1.47314292736834,1.70846016958924,1.1183966749518,0.227178579999552,0.302286240427142,2.89864488701678,12.0459342777394,0,0,1.29955283489534,0.896053774194671,4.35377702408431,13.2935651610885,11.1707981979234,20.1403557470894,0,15.3991772897181,2.54805239706646,7.11066703153331,0,0,0,3.53970027129086,6.73238497482646,8.31275978763019,3.64319186208885,2.13125834818499,4.38169444786511,6.17962826265753,6.70255630673517,5.52933001850572,10.3821886448437,22.4129003225863,2.65383165584962,8.25010934731787,9.27534377533653,10.1823803158397,11.1835056730873,3.22058876712702,3.14170060220183,14.5610521468897,0,0,0,2.24685959107234,2.74500361691176,0.628271760564322,2.9550134432687,2.55715457330331,4.1557608911912,3.89379031362618,22.2009813193689,17.9146037678534,9.85618757891331,5.89237196482127,0.910843100738926,1.60931473103431,1.0803727788321,5.42537344208574,4.83059143974428,4.35586648968489,3.09215691047105,8.79591460512653,0.215567992932842,1.32374256117473,1.75951124163949,1.97276159184817,2.50242524303038,4.87553033131033,5.76189981942242,10.3497818745616,0,0,0,1.24275463521301,2.34526059981096,3.6012412292203,5.68187365404505,3.93528463494808,6.63348585415727,6.97601834251224,7.51165523918934,8.52386999280337,9.70903114489535,14.4467368389604,16.6191059569004,19.0059983652932,14.2707574939183,14.4942932261202,3.15434922846191,0.720332286654991,0.330418782983798,11.3713743665324,30.9267963276089,50.6275944655756,33.5055399437443,30.8575792673714,34.24621875211,28.5338439168839,27.9972146311262,19.4344766574333,42.2243150784453,36.8069473276129,45.0367041245168,25.1669434423182,30.9077411320813,27.2823544358483,5.50036912763937,6.05517116831563,11.270773567308,8.34970444165788,14.5464365375719,15.850695295212,17.7694669319163,15.7942858338174,16.4848664233444,11.8461277364928,3.85388415213294,1.66845105716094,3.34150291692445,2.02375901146368,1.62288097110802,1.4470629585145,2.5462585178142,5.4662266115654,1.45921704097532,4.66754402419738,4.31304619582064,6.32639611036456,5.61667811606209,8.08252409430758,4.12614051100398,4.3419916922703,14.7802552133284,10.9905018826881,25.259571348514,20.0299201214722,26.0506175600237,34.6737952904559,24.9945822930314,33.1727201358258,39.4087860265477,41.8568263436185,49.2715235151635,38.5078789581984,22.4490476425664,26.9047248961612,0,0,12.2941068254759,28.1455481230827,3.69266356971921,3.98519734413491,0.655739781506702,15.6531974866711,4.10160685241134,5.0757036758563,3.87762115919038,0,0.668396022247182,0.566153061577665,6.8817819284732,6.13737301613755,4.34816555741176,3.21321316421807,46.8402281187286,7.83488656135923,17.1031307321255,101.951535997027,3.98235415019888,3.64170954232472,4.53485335447127,4.52652191414155,5.31543407185391,8.9156192903739,16.2809824695979,10.5424781548477,7.48644494607915,23.0706833293146,6.32511651449993,6.18813259489121,2.04263763452273,2.88097750450096,2.45781499187234,1.92903331528433,4.25616560741457,2.49716344642899,2.79733335023606,2.13125464380219,2.81606049676452,4.66030555900404,8.82113592219848,6.76033637060068,6.29711264114032,8.38349656501366,6.08798954415996,6.72977688954751,35.8521429054716,5.93360966433631,2.9048049735635,33.434672610042,26.1124283591293,8.66494902221579,6.69801715833023,6.63456702298916,0,0,0,13.3653886522116,18.663823621287,39.8506155568623,43.5261523511859,50.1811910434725,43.8908753129817,73.3662044333425,76.4544465459357,52.874700280774,40.699101613623,6.21339313086926,0.56369293868419,8.82147621659475,10.9202603701684,14.5838391258036,11.7535439364735,11.1511042823914,12.4398672964499,27.2127164323856,25.2711020065963,6.76435538312817,12.0972602628303,3.47612232690996,6.89265731986558,6.47079030138412,4.54722880422283,5.19177417435696,4.76835251475036,2.04332264183947,2.36303243479324,2.72609414859999,2.057583779685,2.62148081355785,1.75424185331554,1.92423683280659,1.63627663054197,10.6563280299149,0,0,0.167884616364078,122.482202616409,43.7300167801254,71.0628302156989,31.2977833455436,14.0440189129902,1.12950368523413,0.460325236507177,1.71868654031819,0.859265911718438,0.685082519770642,1.5107877947794,2.02506750069542,2.2516060161211,2.26571204492102,1.03552062350364,0.518936737920883,3.59122386060928,4.4390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| |||
|short_description=p1@ENSMUST00000154522,p1@uc008fcj.1 | |||
}} |
Revision as of 16:30, 13 September 2013
Short description: | p1@ENSMUST00000154522, p1@uc008fcj.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000154522_5end, CAGE_peak_1_at_uc008fcj.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:622 |
Association with transcript: | 34bp_to_ENSMUST00000154522, uc008fcj.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial bud | 9.20e-09 | 17 |
lung | 4.38e-08 | 14 |
respiratory tube | 4.38e-08 | 14 |
respiration organ | 4.38e-08 | 14 |
pair of lungs | 4.38e-08 | 14 |
lung primordium | 4.38e-08 | 14 |
lung bud | 4.38e-08 | 14 |
epithelial fold | 1.18e-07 | 20 |
stomach | 3.76e-07 | 16 |
food storage organ | 3.76e-07 | 16 |
tissue | 7.42e-07 | 349 |
reproductive structure | 8.87e-07 | 26 |
reproductive system | 8.87e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.