FFCP PHASE1:Mm9::chr19:29435423..29435440,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67759|HGNC=|MCL_coexpression_id=46|UniProt=D3YY76|association_with_transcript=456bp_to_ENSMUST00000155367_5end|description=CAGE_peak_7_at_5033414D02Rik_5end|id=chr19:29435423..29435440,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,7.15e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.06e-07!23;UBERON:0000974!2.06e-07!23;UBERON:0004807!2.06e-07!23;UBERON:0005058!2.06e-07!23;UBERON:0003351!2.06e-07!23;UBERON:0009113!2.06e-07!23;UBERON:0003295!2.06e-07!23;UBERON:0009722!2.06e-07!23;UBERON:0005562!2.06e-07!23;UBERON:0007690!2.06e-07!23;UBERON:0004177!5.15e-07!29;UBERON:0006562!5.82e-07!24;UBERON:0003408!5.82e-07!24;UBERON:0001557!5.82e-07!24;UBERON:0001042!5.82e-07!24;UBERON:0008814!5.82e-07!24;UBERON:0009145!5.82e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.87e-30,1;UBERON:0005631,4.56e-11,3;UBERON:0000478,4.56e-11,3;UBERON:0000158,4.56e-11,3;UBERON:0004871,4.56e-11,3;UBERON:0002038,7.15e-11,3;UBERON:0009663,7.15e-11,3;UBERON:0009661,7.15e-11,3;UBERON:0000125,7.15e-11,3;UBERON:0002308,7.15e-11,3;UBERON:0002950,1.73e-08,4;UBERON:0001891,1.73e-08,4;UBERON:0009616,1.73e-08,4;UBERON:0010286,1.73e-08,4|phase1_expression=0,0.697950815278722,0.454999239389536,0,0.500895729946347,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,0,0,0,0.95995453676044,0.45881856213434,0,0.430761996159075,0.215471232685889,0,0,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,1.12552522006336,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0,0,7.66304399976559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.585400943573396,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0.810900861160657,0.718976700153791,1.42912905275575,0.179026695667481,0.198681354781265,0.721172697119813,0.295379054349154,0.403865799792591,0.304827226619999,0.201652370273681,0.487289403698762,0.481059208201647,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p7@5033414D02Rik}} | ||
|EntrezGene=67759 | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|UniProt=D3YY76 | |||
|association_with_transcript=456bp_to_ENSMUST00000155367_5end | |||
|description=CAGE_peak_7_at_5033414D02Rik_5end | |||
|id=chr19:29435423..29435440,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,7.15e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.06e-07!23;UBERON:0000974!2.06e-07!23;UBERON:0004807!2.06e-07!23;UBERON:0005058!2.06e-07!23;UBERON:0003351!2.06e-07!23;UBERON:0009113!2.06e-07!23;UBERON:0003295!2.06e-07!23;UBERON:0009722!2.06e-07!23;UBERON:0005562!2.06e-07!23;UBERON:0007690!2.06e-07!23;UBERON:0004177!5.15e-07!29;UBERON:0006562!5.82e-07!24;UBERON:0003408!5.82e-07!24;UBERON:0001557!5.82e-07!24;UBERON:0001042!5.82e-07!24;UBERON:0008814!5.82e-07!24;UBERON:0009145!5.82e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.87e-30,1;UBERON:0005631,4.56e-11,3;UBERON:0000478,4.56e-11,3;UBERON:0000158,4.56e-11,3;UBERON:0004871,4.56e-11,3;UBERON:0002038,7.15e-11,3;UBERON:0009663,7.15e-11,3;UBERON:0009661,7.15e-11,3;UBERON:0000125,7.15e-11,3;UBERON:0002308,7.15e-11,3;UBERON:0002950,1.73e-08,4;UBERON:0001891,1.73e-08,4;UBERON:0009616,1.73e-08,4;UBERON:0010286,1.73e-08,4 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,0,0.500895729946347,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,0,0,0,0.95995453676044,0.45881856213434,0,0.430761996159075,0.215471232685889,0,0,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,1.12552522006336,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0,0,7.66304399976559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.585400943573396,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0.810900861160657,0.718976700153791,1.42912905275575,0.179026695667481,0.198681354781265,0.721172697119813,0.295379054349154,0.403865799792591,0.304827226619999,0.201652370273681,0.487289403698762,0.481059208201647,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p7@5033414D02Rik | |||
}} |
Revision as of 17:19, 13 September 2013
Short description: | p7@5033414D02Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_5033414D02Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | 456bp_to_ENSMUST00000155367_5end |
EntrezGene: | 5033414D02Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 7.15e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.87e-30 | 1 |
extraembryonic membrane | 4.56e-11 | 3 |
extraembryonic structure | 4.56e-11 | 3 |
membranous layer | 4.56e-11 | 3 |
somatic layer of lateral plate mesoderm | 4.56e-11 | 3 |
substantia nigra | 7.15e-11 | 3 |
telencephalic nucleus | 7.15e-11 | 3 |
midbrain nucleus | 7.15e-11 | 3 |
neural nucleus | 7.15e-11 | 3 |
nucleus of brain | 7.15e-11 | 3 |
regional part of midbrain | 1.73e-08 | 4 |
midbrain | 1.73e-08 | 4 |
presumptive midbrain | 1.73e-08 | 4 |
midbrain neural tube | 1.73e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.