FFCP PHASE1:Mm9::chr19:32739919..32739928,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=575|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:32739919..32739928,+|id=chr19:32739919..32739928,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,4.19e-09,6;CL:0000677,4.19e-09,6;CL:0000584,4.19e-09,6;CL:0000075,6.16e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.65e-14,15;UBERON:0001242,2.69e-09,13;UBERON:0001262,2.69e-09,13;UBERON:0004786,2.69e-09,13;UBERON:0004923,9.10e-09,24;UBERON:0001962,1.52e-07,2;UBERON:0001961,1.52e-07,2;UBERON:0001744,1.52e-07,2;UBERON:0005409,6.30e-07,47;UBERON:0000160,7.32e-07,31|phase1_expression=0,1.39590163055744,1.36499771816861,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,0.45881856213434,0,0.430761996159075,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0.527853372491847,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,4.95628174475697,0.528901133327089,0,0,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0,0,1.51296634912286,0.597423819763102,0,0,0,0.610953983535943,0.387904974335251,0.140271639780637,0.126473074248515,0,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,2.87536413054709,0,0.312037673114561,0.252578877947112,0.538192240565737,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,2.98114438571124,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p@chr19:32739919..32739928,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=575 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:32739919..32739928,+ | |||
|id=chr19:32739919..32739928,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.19e-09,6;CL:0000677,4.19e-09,6;CL:0000584,4.19e-09,6;CL:0000075,6.16e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.65e-14,15;UBERON:0001242,2.69e-09,13;UBERON:0001262,2.69e-09,13;UBERON:0004786,2.69e-09,13;UBERON:0004923,9.10e-09,24;UBERON:0001962,1.52e-07,2;UBERON:0001961,1.52e-07,2;UBERON:0001744,1.52e-07,2;UBERON:0005409,6.30e-07,47;UBERON:0000160,7.32e-07,31 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,0.45881856213434,0,0.430761996159075,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0.527853372491847,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,4.95628174475697,0.528901133327089,0,0,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0,0,1.51296634912286,0.597423819763102,0,0,0,0.610953983535943,0.387904974335251,0.140271639780637,0.126473074248515,0,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,2.87536413054709,0,0.312037673114561,0.252578877947112,0.538192240565737,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,2.98114438571124,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr19:32739919..32739928,+ | |||
}} |
Revision as of 17:23, 13 September 2013
Short description: | p@chr19:32739919..32739928, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:32739919..32739928, + |
Coexpression cluster: | MCL_coexpression_mm9:575 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.19e-09 | 6 |
gut absorptive cell | 4.19e-09 | 6 |
enterocyte | 4.19e-09 | 6 |
columnar/cuboidal epithelial cell | 6.16e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.65e-14 | 15 |
intestinal mucosa | 2.69e-09 | 13 |
wall of intestine | 2.69e-09 | 13 |
gastrointestinal system mucosa | 2.69e-09 | 13 |
organ component layer | 9.10e-09 | 24 |
gut-associated lymphoid tissue | 1.52e-07 | 2 |
mucosa-associated lymphoid tissue | 1.52e-07 | 2 |
lymphoid tissue | 1.52e-07 | 2 |
gastrointestinal system | 6.30e-07 | 47 |
intestine | 7.32e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.