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FFCP PHASE1:Mm9::chr19:34952370..34952413,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=75735|HGNC=|MCL_coexpression_id=8|UniProt=Q8K4K6,Q543J7|association_with_transcript=0bp_to_ENSMUST00000112460,NM_023792,uc008hgv.1_5end|description=CAGE_peak_2_at_Pank1_5end|id=chr19:34952370..34952413,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.34e-13!22;UBERON:0007499!1.34e-13!22;UBERON:0006925!1.34e-13!22;UBERON:0009497!1.34e-13!22;UBERON:0000015!1.34e-13!22;UBERON:0002423!1.34e-13!22;UBERON:0006235!1.34e-13!22;UBERON:0008835!1.34e-13!22;UBERON:0003894!1.34e-13!22;UBERON:0004161!1.34e-13!22;UBERON:0008836!1.34e-13!22;UBERON:0002365!7.35e-13!25;UBERON:0002330!7.35e-13!25;UBERON:0009854!3.23e-12!23;UBERON:0009856!3.23e-12!23;UBERON:0005172!9.17e-10!49;UBERON:0005173!9.17e-10!49;UBERON:0002417!9.17e-10!49;UBERON:0000916!9.17e-10!49;UBERON:0009569!1.86e-09!66;UBERON:0000466!3.79e-08!79;UBERON:0005177!8.41e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.90e-16,22;UBERON:0007499,1.90e-16,22;UBERON:0006925,1.90e-16,22;UBERON:0009497,1.90e-16,22;UBERON:0000015,1.90e-16,22;UBERON:0002423,1.90e-16,22;UBERON:0006235,1.90e-16,22;UBERON:0008835,1.90e-16,22;UBERON:0003894,1.90e-16,22;UBERON:0004161,1.90e-16,22;UBERON:0008836,1.90e-16,22;UBERON:0009854,2.96e-15,23;UBERON:0009856,2.96e-15,23;UBERON:0002365,4.96e-15,25;UBERON:0002330,4.96e-15,25;UBERON:0005172,8.94e-11,49;UBERON:0005173,8.94e-11,49;UBERON:0002417,8.94e-11,49;UBERON:0000916,8.94e-11,49;UBERON:0009569,6.71e-09,66;UBERON:0005256,5.76e-08,45|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0.90739263392049,0.500895729946347,0.33575854382378,0.467225281191051,0,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,5.86798702042381,0.0992909512008853,0.261199789138935,0.799962113967033,0.45881856213434,0,0,0.861884930743556,2.09025761402011,1.26015064879965,0.221730510655305,0.635030673459631,0.61506478758457,0,2.3108129580102,0.997407872150954,2.04169356262369,0,0,0,0,0,0,0.629484089877886,0.101376931219515,0.367093504323363,0,1.52617609466313,1.75748946187577,0.388859798148567,1.1198913730029,1.43752564364972,0,0,0,0,0,0,0.202316460859598,1.5869729378161,0.633831403506179,0,0.889294796111139,0,0,0,0.599200221036809,0,0.207379224616955,0.405017814995072,0,0.285650984403804,1.10434270475807,0.734944795289724,0.479227355091182,0,1.10115880999389,1.91531007127782,1.38245879930619,0.263772575460388,0.640413505216868,1.04182674111352,0.837548997004143,3.37657566019008,3.36156145108982,0.294628585473668,0.711858403995515,1.1183966749518,0,0.151143120213571,1.15945795480671,42.1607699720879,14.9593693415705,75.5584468292944,77.3233936762726,111.110668000139,29.9146614880631,1.53387290320252,0.779358013808606,0.35333957451034,0.422530259330042,5.13305909657271,2.54805239706646,0,0.432982082022428,0.506719730950197,0,43.5040581729618,0.258937883647172,3.41416919849097,1.04091196059682,1.82679286987285,2.53677046981664,1.05505848386836,0.352766121407114,3.89566433121994,0.247194967734374,25.5940861748244,0,0,0,0,0,0.878342391034642,0.83778682725382,1.02182822083437,0.11981512450592,0,0.254140454146129,2.39665023047716,2.74500361691176,1.25654352112864,2.78118912307642,1.79000820131231,1.24672826735736,2.10913641988085,0.407357455401265,1.49288364732112,10.6143558542143,89.227346895865,0.260240885925407,1.83921683546778,0.360124259610698,1.05493372485001,0.408218994907967,0.2562274405697,0.281105173679186,13.7112786491678,1.29340795759705,0.378212160335639,0,0,0.278047249225598,0,0.205782136407943,2.9855140022774,0,0,0,0.414251545071004,0.469052119962192,0,0,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0,0.492502392237286,0.324275238183423,0.292399974850665,0.658650345873152,0.536825675041487,2.10289948564127,1.23485534855141,2.64335026387038,0.793351699990633,0.426576501070468,0.696710015581316,1.15980715189884,0.403367049246685,1.77902435075896,0.951128130562796,0,0.164698954724011,1.00534083520108,0.795825888164603,0.58489226135736,0.898819408654221,0.648414149624083,0.796565093017469,0.379335801906163,0.456994050438915,1.1270773567308,1.22190796707189,0.969762435838129,0.911765658574141,1.3279672796094,7.23289725100051,10.047918581848,19.3733547357227,84.7854513469246,1.50160595144485,3.73462090715086,5.8464149220062,6.28866376304359,11.8176808278684,14.7682994033223,21.28951417136,22.2125260681798,22.7885972946108,79.072513590045,58.426128783955,34.0121063694871,53.5467221247877,71.2207731681991,73.3314152472318,2.40179147216586,0.189491411770485,0.162964976442026,0.678980343100753,0.704070744865506,3.35012514883632,4.76087281772027,1.95133647857799,0.630540576424764,0.8858587585951,0.797273843287435,1.63863314715738,2.76295970985433,2.4590339958857,0,0,1.47529281905711,1.10374698521893,2.24770825982909,2.22702204525186,1.80328439914343,1.26235463602186,0.315508219416257,0.390438744296638,0,0.477937595905104,0.22279867408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|EntrezGene=75735
|HGNC=
|MCL_coexpression_id=8
|UniProt=Q8K4K6,Q543J7
|association_with_transcript=0bp_to_ENSMUST00000112460,NM_023792,uc008hgv.1_5end
|description=CAGE_peak_2_at_Pank1_5end
|id=chr19:34952370..34952413,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!1.34e-13!22;UBERON:0007499!1.34e-13!22;UBERON:0006925!1.34e-13!22;UBERON:0009497!1.34e-13!22;UBERON:0000015!1.34e-13!22;UBERON:0002423!1.34e-13!22;UBERON:0006235!1.34e-13!22;UBERON:0008835!1.34e-13!22;UBERON:0003894!1.34e-13!22;UBERON:0004161!1.34e-13!22;UBERON:0008836!1.34e-13!22;UBERON:0002365!7.35e-13!25;UBERON:0002330!7.35e-13!25;UBERON:0009854!3.23e-12!23;UBERON:0009856!3.23e-12!23;UBERON:0005172!9.17e-10!49;UBERON:0005173!9.17e-10!49;UBERON:0002417!9.17e-10!49;UBERON:0000916!9.17e-10!49;UBERON:0009569!1.86e-09!66;UBERON:0000466!3.79e-08!79;UBERON:0005177!8.41e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.90e-16,22;UBERON:0007499,1.90e-16,22;UBERON:0006925,1.90e-16,22;UBERON:0009497,1.90e-16,22;UBERON:0000015,1.90e-16,22;UBERON:0002423,1.90e-16,22;UBERON:0006235,1.90e-16,22;UBERON:0008835,1.90e-16,22;UBERON:0003894,1.90e-16,22;UBERON:0004161,1.90e-16,22;UBERON:0008836,1.90e-16,22;UBERON:0009854,2.96e-15,23;UBERON:0009856,2.96e-15,23;UBERON:0002365,4.96e-15,25;UBERON:0002330,4.96e-15,25;UBERON:0005172,8.94e-11,49;UBERON:0005173,8.94e-11,49;UBERON:0002417,8.94e-11,49;UBERON:0000916,8.94e-11,49;UBERON:0009569,6.71e-09,66;UBERON:0005256,5.76e-08,45
|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0.90739263392049,0.500895729946347,0.33575854382378,0.467225281191051,0,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,5.86798702042381,0.0992909512008853,0.261199789138935,0.799962113967033,0.45881856213434,0,0,0.861884930743556,2.09025761402011,1.26015064879965,0.221730510655305,0.635030673459631,0.61506478758457,0,2.3108129580102,0.997407872150954,2.04169356262369,0,0,0,0,0,0,0.629484089877886,0.101376931219515,0.367093504323363,0,1.52617609466313,1.75748946187577,0.388859798148567,1.1198913730029,1.43752564364972,0,0,0,0,0,0,0.202316460859598,1.5869729378161,0.633831403506179,0,0.889294796111139,0,0,0,0.599200221036809,0,0.207379224616955,0.405017814995072,0,0.285650984403804,1.10434270475807,0.734944795289724,0.479227355091182,0,1.10115880999389,1.91531007127782,1.38245879930619,0.263772575460388,0.640413505216868,1.04182674111352,0.837548997004143,3.37657566019008,3.36156145108982,0.294628585473668,0.711858403995515,1.1183966749518,0,0.151143120213571,1.15945795480671,42.1607699720879,14.9593693415705,75.5584468292944,77.3233936762726,111.110668000139,29.9146614880631,1.53387290320252,0.779358013808606,0.35333957451034,0.422530259330042,5.13305909657271,2.54805239706646,0,0.432982082022428,0.506719730950197,0,43.5040581729618,0.258937883647172,3.41416919849097,1.04091196059682,1.82679286987285,2.53677046981664,1.05505848386836,0.352766121407114,3.89566433121994,0.247194967734374,25.5940861748244,0,0,0,0,0,0.878342391034642,0.83778682725382,1.02182822083437,0.11981512450592,0,0.254140454146129,2.39665023047716,2.74500361691176,1.25654352112864,2.78118912307642,1.79000820131231,1.24672826735736,2.10913641988085,0.407357455401265,1.49288364732112,10.6143558542143,89.227346895865,0.260240885925407,1.83921683546778,0.360124259610698,1.05493372485001,0.408218994907967,0.2562274405697,0.281105173679186,13.7112786491678,1.29340795759705,0.378212160335639,0,0,0.278047249225598,0,0.205782136407943,2.9855140022774,0,0,0,0.414251545071004,0.469052119962192,0,0,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0,0.492502392237286,0.324275238183423,0.292399974850665,0.658650345873152,0.536825675041487,2.10289948564127,1.23485534855141,2.64335026387038,0.793351699990633,0.426576501070468,0.696710015581316,1.15980715189884,0.403367049246685,1.77902435075896,0.951128130562796,0,0.164698954724011,1.00534083520108,0.795825888164603,0.58489226135736,0.898819408654221,0.648414149624083,0.796565093017469,0.379335801906163,0.456994050438915,1.1270773567308,1.22190796707189,0.969762435838129,0.911765658574141,1.3279672796094,7.23289725100051,10.047918581848,19.3733547357227,84.7854513469246,1.50160595144485,3.73462090715086,5.8464149220062,6.28866376304359,11.8176808278684,14.7682994033223,21.28951417136,22.2125260681798,22.7885972946108,79.072513590045,58.426128783955,34.0121063694871,53.5467221247877,71.2207731681991,73.3314152472318,2.40179147216586,0.189491411770485,0.162964976442026,0.678980343100753,0.704070744865506,3.35012514883632,4.76087281772027,1.95133647857799,0.630540576424764,0.8858587585951,0.797273843287435,1.63863314715738,2.76295970985433,2.4590339958857,0,0,1.47529281905711,1.10374698521893,2.24770825982909,2.22702204525186,1.80328439914343,1.26235463602186,0.315508219416257,0.390438744296638,0,0.477937595905104,0.222798674082394,0.283076530788832,0,0,0,0.963963949265421,10.9293865610367,1.78065603667255,0,0.329940245945071,0,0.242780636154981,0,0.565815239267694,1.47650946440386,0.922305443831782,0.258428293168221,0,0.712994756769443,0.632073515871632,0,1.03135543248187,0.340439605753788,0.720244376125241,0.129358683782755,0,0.532020700926821,0,0.329098041204242,0,0,0.21183207086382,0.220528398054962,3.2977250588296,0.807322133479528,1.26657142349127,1.79058516004705,1.96969079694074,0,2.59595422814714,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0.279902904647316,0,0,0.632671987162271,0,1.08005340821801,0.209088296014469,1.09181281873089,0.944050424693745,3.55409859618945,0.785267825952089,0.90730481304255,0.621339313086926,1.69107881605257,4.78452947340732,4.46737924234164,7.58359634541786,9.04118764344118,7.26511339610346,2.8165737274981,1.69265700297135,3.25063967719704,2.41584120826006,3.45636007509439,0,0,0.205421914329655,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0.304827226619999,0.201652370273681,0.292373642219257,0,0,0.226730383615211,0,0,0,0.772758376128762,0,0.183151624267265,0,0.501572104035363,0.564751842617067,1.84130094602871,0.572895513439397,1.3748254587495,2.05524755931193,1.5107877947794,1.35004500046361,1.35096360967266,2.26571204492102,0,0.726511433089237,0,0.341467211508268,2.18796045361465,2.72497111416377,3.30918315210025,2.889207461421,3.5025959730612,2.88827288632634,3.53776096469316,2.78827229879264,2.82939512079114,2.99652823903624,2.75308155340938,2.69946704091382,2.38146845641537,1.73826488917283,1.73618298417335,1.64834360321323,3.38557516309114,2.74295401908332,2.8396128985494,1.90748951957857,3.19762116591123,2.4468438907986,3.29996970777538,1.64635175585495,2.89376682581627,1.7654534799962,1.68342681497322,1.42362021749009,1.18205378850676,2.04615521584845,3.87342102964915,2.89359916471712,0.249810577937946,3.74290573512653,3.65280791882107,1.91288332068843,1.98532277207564,3.2461496986859
|short_description=p2@Pank1
}}

Revision as of 17:27, 13 September 2013

Short description:p2@Pank1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pank1_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000112460, NM_023792, uc008hgv.1_5end
EntrezGene:Pank1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pank1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F742.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C875.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F477.32
Mouse hepatocyte, donor8.CNhs13091.11824-124F6111.11
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A729.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B643.50
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H125.59
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B210.61
eyeball, adult.CNhs10484.31-12G489.23
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A213.71
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I17.23
kidney, neonate N25.CNhs11122.1353-25F310.05
kidney, neonate N30.CNhs11203.1385-42H119.37
liver, adult pregnant day01.CNhs10466.508-5B284.79
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E15.85
liver, embryo E15.CNhs10520.433-16D76.29
liver, embryo E16.CNhs10523.462-17F511.82
liver, embryo E17.CNhs10510.481-18A314.77
liver, embryo E18.CNhs10579.499-43G421.29
liver, neonate N00.CNhs11117.641-24F422.21
liver, neonate N03.CNhs11123.1345-25G222.79
liver, neonate N06.CNhs11101.684-20A879.07
liver, neonate N07.CNhs11103.716-20H258.43
liver, neonate N10.CNhs11115.751-24B934.01
liver, neonate N20.CNhs11220.823-25A353.55
liver, neonate N25.CNhs11198.1368-26H171.22
liver, neonate N30.CNhs11106.1382-42D173.33
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I710.93
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A93.55
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G57.58
testis, embryo E17.CNhs11029.486-18I59.04
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver1.90e-1622
epithelial sac1.90e-1622
digestive gland1.90e-1622
epithelium of foregut-midgut junction1.90e-1622
anatomical boundary1.90e-1622
hepatobiliary system1.90e-1622
foregut-midgut junction1.90e-1622
hepatic diverticulum1.90e-1622
liver primordium1.90e-1622
septum transversum1.90e-1622
liver bud1.90e-1622
digestive tract diverticulum2.96e-1523
sac2.96e-1523
exocrine gland4.96e-1525
exocrine system4.96e-1525
abdomen element8.94e-1149
abdominal segment element8.94e-1149
abdominal segment of trunk8.94e-1149
abdomen8.94e-1149
subdivision of trunk6.71e-0966
trunk mesenchyme5.76e-0845







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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