FFCP PHASE1:Mm9::chr19:5803571..5803582,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=17|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:5803571..5803582,-|id=chr19:5803571..5803582,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,5.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.05e-12,14;UBERON:0003135,2.29e-11,15;UBERON:0003101,1.05e-10,16;UBERON:0000079,1.05e-10,16;UBERON:0004176,4.01e-10,17;UBERON:0009196,4.01e-10,17;UBERON:0009117,4.01e-10,17;UBERON:0000991,1.33e-09,18;UBERON:0005564,1.33e-09,18;UBERON:0003133,2.18e-07,24;UBERON:0002038,5.46e-07,3;UBERON:0009663,5.46e-07,3;UBERON:0009661,5.46e-07,3;UBERON:0000125,5.46e-07,3;UBERON:0002308,5.46e-07,3;UBERON:0005156,7.12e-07,26;UBERON:0000990,7.12e-07,26|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,0.129123323441576,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,1.61582251287033,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0.612508068787107,0.418531630736908,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,1.12552522006336,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.662524555381181,0,0,0,0.209446706813455,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452114453507145,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.517434735131018,0,0.177340233642274,0.356737635204141,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0.565105371014073,0,0.228778173206523,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,2.81846469342095,0,0,0.388902376688095,0.387479470433193,0.506868376472335,0.469428954583016,0,0.104859344425711,3.14059357073808,3.45636007509439,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.385813221962283,0,0,0,0,0,0|short_description=p@chr19:5803571..5803582,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=17 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:5803571..5803582,- | |||
|id=chr19:5803571..5803582,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,5.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.05e-12,14;UBERON:0003135,2.29e-11,15;UBERON:0003101,1.05e-10,16;UBERON:0000079,1.05e-10,16;UBERON:0004176,4.01e-10,17;UBERON:0009196,4.01e-10,17;UBERON:0009117,4.01e-10,17;UBERON:0000991,1.33e-09,18;UBERON:0005564,1.33e-09,18;UBERON:0003133,2.18e-07,24;UBERON:0002038,5.46e-07,3;UBERON:0009663,5.46e-07,3;UBERON:0009661,5.46e-07,3;UBERON:0000125,5.46e-07,3;UBERON:0002308,5.46e-07,3;UBERON:0005156,7.12e-07,26;UBERON:0000990,7.12e-07,26 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,0.129123323441576,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,1.61582251287033,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0.612508068787107,0.418531630736908,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,1.12552522006336,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.662524555381181,0,0,0,0.209446706813455,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452114453507145,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.517434735131018,0,0.177340233642274,0.356737635204141,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0.565105371014073,0,0.228778173206523,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,2.81846469342095,0,0,0.388902376688095,0.387479470433193,0.506868376472335,0.469428954583016,0,0.104859344425711,3.14059357073808,3.45636007509439,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p@chr19:5803571..5803582,- | |||
}} |
Revision as of 18:13, 13 September 2013
Short description: | p@chr19:5803571..5803582, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:5803571..5803582, - |
Coexpression cluster: | MCL_coexpression_mm9:17 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 4.05e-12 | 14 |
male reproductive organ | 2.29e-11 | 15 |
male organism | 1.05e-10 | 16 |
male reproductive system | 1.05e-10 | 16 |
external genitalia | 4.01e-10 | 17 |
indifferent external genitalia | 4.01e-10 | 17 |
indifferent gonad | 4.01e-10 | 17 |
gonad | 1.33e-09 | 18 |
gonad primordium | 1.33e-09 | 18 |
reproductive organ | 2.18e-07 | 24 |
substantia nigra | 5.46e-07 | 3 |
telencephalic nucleus | 5.46e-07 | 3 |
midbrain nucleus | 5.46e-07 | 3 |
neural nucleus | 5.46e-07 | 3 |
nucleus of brain | 5.46e-07 | 3 |
reproductive structure | 7.12e-07 | 26 |
reproductive system | 7.12e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.